RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 EPRSP07814 1512 aaKnown RBP13.25□□□□□ -0.29
GAPVD1-213ENST00000469498 CCDC18Q5T9S5 1454 aa13.25□□□□□ -0.29
GAPVD1-213ENST00000469498 DNAJC5Q9H3Z4 198 aa13.25□□□□□ -0.29
GAPVD1-213ENST00000469498 ATP1B4Q9UN42 357 aaPredicted RBP13.25□□□□□ -0.29
GAPVD1-213ENST00000469498 ARID3CA6NKF2 412 aa13.24□□□□□ -0.29
GAPVD1-213ENST00000469498 CYB5RLQ6IPT4 315 aa13.23□□□□□ -0.29
GAPVD1-213ENST00000469498 ATF5Q9Y2D1 282 aaPredicted RBP13.22□□□□□ -0.29
GAPVD1-213ENST00000469498 KDM5BQ9UGL1 1544 aa13.22□□□□□ -0.29
GAPVD1-213ENST00000469498 MAGI3Q5TCQ9 1506 aa13.2□□□□□ -0.3
GAPVD1-213ENST00000469498 ATP10BO94823 1461 aa13.2□□□□□ -0.3
GAPVD1-213ENST00000469498 MAP3K1Q13233 1512 aa13.18□□□□□ -0.3
GAPVD1-213ENST00000469498 EHBP1L1Q8N3D4 1523 aa13.18□□□□□ -0.3
GAPVD1-213ENST00000469498 SUPT6HQ7KZ85 1726 aaKnown RBP13.18□□□□□ -0.3
GAPVD1-213ENST00000469498 KIF14Q15058 1648 aa13.17□□□□□ -0.3
GAPVD1-213ENST00000469498 FXR2P51116 673 aaKnown RBP eCLIP13.17□□□□□ -0.3
GAPVD1-213ENST00000469498 MAPKBP1O60336 1514 aa13.15□□□□□ -0.3
GAPVD1-213ENST00000469498 KIF13AQ9H1H9 1805 aa13.15□□□□□ -0.3
GAPVD1-213ENST00000469498 LRRC9Q6ZRR7 1453 aa13.14□□□□□ -0.31
GAPVD1-213ENST00000469498 MYO5CQ9NQX4 1742 aa13.13□□□□□ -0.31
GAPVD1-213ENST00000469498 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
GAPVD1-213ENST00000469498 CDC42BPAQ5VT25 1732 aa13.13□□□□□ -0.31
GAPVD1-213ENST00000469498 TTC37Q6PGP7 1564 aa13.12□□□□□ -0.31
GAPVD1-213ENST00000469498 WDR7Q9Y4E6 1490 aa13.12□□□□□ -0.31
GAPVD1-213ENST00000469498 ASXL2Q76L83 1435 aa13.12□□□□□ -0.31
GAPVD1-213ENST00000469498 ITSN2Q9NZM3 1697 aa13.12□□□□□ -0.31
GAPVD1-213ENST00000469498 MTUS2Q5JR59 1369 aa13.11□□□□□ -0.31
GAPVD1-213ENST00000469498 TROQ12816 1431 aaPredicted RBP13.11□□□□□ -0.31
GAPVD1-213ENST00000469498 TSPOAP1O95153 1857 aa13.1□□□□□ -0.31
GAPVD1-213ENST00000469498 NPM1P06748 294 aaKnown RBP eCLIP13.1□□□□□ -0.31
GAPVD1-213ENST00000469498 PPARGC1BQ86YN6 1023 aaKnown RBP13.1□□□□□ -0.31
GAPVD1-213ENST00000469498 DIP2BQ9P265 1576 aa13.1□□□□□ -0.31
GAPVD1-213ENST00000469498 KANK4Q5T7N3 995 aaPredicted RBP13.08□□□□□ -0.32
GAPVD1-213ENST00000469498 PREX2Q70Z35 1606 aa13.08□□□□□ -0.32
GAPVD1-213ENST00000469498 ABCA9Q8IUA7 1624 aa13.08□□□□□ -0.32
GAPVD1-213ENST00000469498 CDC42BPBQ9Y5S2 1711 aa13.08□□□□□ -0.32
GAPVD1-213ENST00000469498 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.07□□□□□ -0.32
GAPVD1-213ENST00000469498 NCOA2Q15596 1464 aa13.06□□□□□ -0.32
GAPVD1-213ENST00000469498 CDK11AQ9UQ88 783 aaPredicted RBP13.06□□□□□ -0.32
GAPVD1-213ENST00000469498 MAP3K4Q9Y6R4 1608 aa13.06□□□□□ -0.32
GAPVD1-213ENST00000469498 PLEKHD1A6NEE1 506 aa13.05□□□□□ -0.32
GAPVD1-213ENST00000469498 ABCC10Q5T3U5 1492 aa13.04□□□□□ -0.32
GAPVD1-213ENST00000469498 GLI2P10070 1586 aa13.03□□□□□ -0.32
GAPVD1-213ENST00000469498 PPRC1Q5VV67 1664 aaKnown RBP13.02□□□□□ -0.32
GAPVD1-213ENST00000469498 KCNH8Q96L42 1107 aa13.01□□□□□ -0.33
GAPVD1-213ENST00000469498 EVX2Q03828 476 aa12.99□□□□□ -0.33
GAPVD1-213ENST00000469498 PTPN23Q9H3S7 1636 aa12.99□□□□□ -0.33
GAPVD1-213ENST00000469498 CFAP74Q9C0B2 1584 aa12.98□□□□□ -0.33
GAPVD1-213ENST00000469498 PHLDB1Q86UU1 1377 aa12.98□□□□□ -0.33
GAPVD1-213ENST00000469498 ARHGAP5Q13017 1502 aa12.98□□□□□ -0.33
GAPVD1-213ENST00000469498 MYOM3Q5VTT5 1437 aa12.97□□□□□ -0.33
GAPVD1-213ENST00000469498 SAMD9LQ8IVG5 1584 aa12.97□□□□□ -0.33
GAPVD1-213ENST00000469498 CCNB3Q8WWL7 1395 aa12.96□□□□□ -0.33
GAPVD1-213ENST00000469498 GPATCH8Q9UKJ3 1502 aaKnown RBP12.95□□□□□ -0.34
GAPVD1-213ENST00000469498 CROCC2H7BZ55 1655 aa12.95□□□□□ -0.34
GAPVD1-213ENST00000469498 ARAP3Q8WWN8 1544 aa12.94□□□□□ -0.34
GAPVD1-213ENST00000469498 FGD6Q6ZV73 1430 aa12.93□□□□□ -0.34
GAPVD1-213ENST00000469498 CAMSAP2Q08AD1 1489 aa12.92□□□□□ -0.34
GAPVD1-213ENST00000469498 LHX8Q68G74 356 aa12.92□□□□□ -0.34
GAPVD1-213ENST00000469498 CD109Q6YHK3 1445 aa12.92□□□□□ -0.34
GAPVD1-213ENST00000469498 FAM69CQ0P6D2 419 aa12.91□□□□□ -0.34
GAPVD1-213ENST00000469498 ABCC1P33527 1531 aa12.91□□□□□ -0.34
GAPVD1-213ENST00000469498 PLCH2O75038 1416 aa12.9□□□□□ -0.34
GAPVD1-213ENST00000469498 SYCP2Q9BX26 1530 aa12.9□□□□□ -0.34
GAPVD1-213ENST00000469498 FANCAO15360 1455 aa12.9□□□□□ -0.34
GAPVD1-213ENST00000469498 ADGBQ8N7X0 1667 aa12.89□□□□□ -0.35
GAPVD1-213ENST00000469498 RRBP1Q9P2E9 1410 aaKnown RBP12.89□□□□□ -0.35
GAPVD1-213ENST00000469498 DNMT1P26358 1616 aaKnown RBP12.89□□□□□ -0.35
GAPVD1-213ENST00000469498 TCOF1Q13428 1488 aaKnown RBP12.89□□□□□ -0.35
GAPVD1-213ENST00000469498 MIA2Q96PC5 1412 aa12.88□□□□□ -0.35
GAPVD1-213ENST00000469498 RICTORQ6R327 1708 aa12.88□□□□□ -0.35
GAPVD1-213ENST00000469498 TEX14Q8IWB6 1497 aa12.87□□□□□ -0.35
GAPVD1-213ENST00000469498 CFDP1Q9UEE9 299 aaPredicted RBP12.87□□□□□ -0.35
GAPVD1-213ENST00000469498 ZNF777Q9ULD5 760 aaPredicted RBP12.86□□□□□ -0.35
GAPVD1-213ENST00000469498 ARHGEF5Q12774 1597 aa12.86□□□□□ -0.35
GAPVD1-213ENST00000469498 ADGRL1O94910 1474 aa12.85□□□□□ -0.35
GAPVD1-213ENST00000469498 NEO1Q92859 1461 aa12.85□□□□□ -0.35
GAPVD1-213ENST00000469498 FRMPD1Q5SYB0 1578 aa12.84□□□□□ -0.35
GAPVD1-213ENST00000469498 ZNF644Q9H582 1327 aaPredicted RBP12.84□□□□□ -0.35
GAPVD1-213ENST00000469498 PLEKHH2Q8IVE3 1493 aa12.84□□□□□ -0.35
GAPVD1-213ENST00000469498 AKNAQ7Z591 1439 aa12.83□□□□□ -0.36
GAPVD1-213ENST00000469498 FAM50AQ14320 339 aaKnown RBP12.83□□□□□ -0.36
GAPVD1-213ENST00000469498 ARHGEF12Q9NZN5 1544 aa12.83□□□□□ -0.36
GAPVD1-213ENST00000469498 EFCAB2Q5VUJ9 269 aa12.82□□□□□ -0.36
GAPVD1-213ENST00000469498 KDM6BO15054 1643 aa12.81□□□□□ -0.36
GAPVD1-213ENST00000469498 PRKAR2AP13861 404 aaKnown RBP12.81□□□□□ -0.36
GAPVD1-213ENST00000469498 GCC2Q8IWJ2 1684 aa12.8□□□□□ -0.36
GAPVD1-213ENST00000469498 CCDC141Q6ZP82 1450 aa12.8□□□□□ -0.36
GAPVD1-213ENST00000469498 HECW2Q9P2P5 1572 aa12.8□□□□□ -0.36
GAPVD1-213ENST00000469498 INO80Q9ULG1 1556 aaPredicted RBP12.8□□□□□ -0.36
GAPVD1-213ENST00000469498 DAPK1P53355 1430 aa12.79□□□□□ -0.36
GAPVD1-213ENST00000469498 KDM5CP41229 1560 aa12.79□□□□□ -0.36
GAPVD1-213ENST00000469498 MAST1Q9Y2H9 1570 aa12.79□□□□□ -0.36
GAPVD1-213ENST00000469498 KIDINS220Q9ULH0 1771 aa12.79□□□□□ -0.36
GAPVD1-213ENST00000469498 SCAPERQ9BY12 1400 aa12.79□□□□□ -0.36
GAPVD1-213ENST00000469498 MBD5Q9P267 1494 aa12.78□□□□□ -0.36
GAPVD1-213ENST00000469498 C19orf67A6NJJ6 358 aa12.78□□□□□ -0.36
GAPVD1-213ENST00000469498 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.78□□□□□ -0.36
GAPVD1-213ENST00000469498 POGZQ7Z3K3 1410 aa12.78□□□□□ -0.36
GAPVD1-213ENST00000469498 KIAA1107Q9UPP5 1409 aa12.78□□□□□ -0.36
GAPVD1-213ENST00000469498 TRAPPC8Q9Y2L5 1435 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms