RNA–Protein interactions for RNA: ENST00000469187.5

TRIM6-206, Transcript of tripartite motif containing 6, humanhuman

TSL 2

Gene TRIM6, Length 1,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-206ENST00000469187 TSPY10P0CW01 314 aa16.17■□□□□ 0.18
TRIM6-206ENST00000469187 ARHGAP5Q13017 1502 aa16.17■□□□□ 0.18
TRIM6-206ENST00000469187 RRBP1Q9P2E9 1410 aaKnown RBP16.17■□□□□ 0.18
TRIM6-206ENST00000469187 GLI2P10070 1586 aa16.17■□□□□ 0.18
TRIM6-206ENST00000469187 ABCA9Q8IUA7 1624 aa16.16■□□□□ 0.18
TRIM6-206ENST00000469187 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.14■□□□□ 0.17
TRIM6-206ENST00000469187 TTC37Q6PGP7 1564 aa16.14■□□□□ 0.17
TRIM6-206ENST00000469187 MYT1LQ9UL68 1186 aa16.14■□□□□ 0.17
TRIM6-206ENST00000469187 FANCAO15360 1455 aa16.13■□□□□ 0.17
TRIM6-206ENST00000469187 ITSN2Q9NZM3 1697 aa16.12■□□□□ 0.17
TRIM6-206ENST00000469187 DIP2BQ9P265 1576 aa16.12■□□□□ 0.17
TRIM6-206ENST00000469187 AKNAQ7Z591 1439 aa16.11■□□□□ 0.17
TRIM6-206ENST00000469187 MYO5CQ9NQX4 1742 aa16.11■□□□□ 0.17
TRIM6-206ENST00000469187 PLEKHH2Q8IVE3 1493 aa16.11■□□□□ 0.17
TRIM6-206ENST00000469187 CHIC2Q9UKJ5 165 aa16.11■□□□□ 0.17
TRIM6-206ENST00000469187 CDC42BPAQ5VT25 1732 aa16.11■□□□□ 0.17
TRIM6-206ENST00000469187 PTPN23Q9H3S7 1636 aa16.1■□□□□ 0.17
TRIM6-206ENST00000469187 TEX14Q8IWB6 1497 aa16.1■□□□□ 0.17
TRIM6-206ENST00000469187 ARAP3Q8WWN8 1544 aa16.09■□□□□ 0.17
TRIM6-206ENST00000469187 AFAP1Q8N556 730 aa16.09■□□□□ 0.17
TRIM6-206ENST00000469187 SCAPERQ9BY12 1400 aa16.09■□□□□ 0.17
TRIM6-206ENST00000469187 KIAA1107Q9UPP5 1409 aa16.09■□□□□ 0.17
TRIM6-206ENST00000469187 TCOF1Q13428 1488 aaKnown RBP16.09■□□□□ 0.17
TRIM6-206ENST00000469187 CDC42BPBQ9Y5S2 1711 aa16.08■□□□□ 0.17
TRIM6-206ENST00000469187 CAMSAP2Q08AD1 1489 aa16.08■□□□□ 0.16
TRIM6-206ENST00000469187 PREX2Q70Z35 1606 aa16.08■□□□□ 0.16
TRIM6-206ENST00000469187 NEO1Q92859 1461 aa16.07■□□□□ 0.16
TRIM6-206ENST00000469187 MAP3K4Q9Y6R4 1608 aa16.06■□□□□ 0.16
TRIM6-206ENST00000469187 ADGRL1O94910 1474 aa16.05■□□□□ 0.16
TRIM6-206ENST00000469187 RAPGEF3O95398 923 aa16.05■□□□□ 0.16
TRIM6-206ENST00000469187 TSPOAP1O95153 1857 aa16.05■□□□□ 0.16
TRIM6-206ENST00000469187 SPAG9O60271 1321 aaKnown RBP16.04■□□□□ 0.16
TRIM6-206ENST00000469187 RRP7BPQ9NSQ0 103 aa16.03■□□□□ 0.16
TRIM6-206ENST00000469187 KIF13AQ9H1H9 1805 aa16.03■□□□□ 0.16
TRIM6-206ENST00000469187 ABCC5O15440 1437 aa16.02■□□□□ 0.16
TRIM6-206ENST00000469187 DAPK1P53355 1430 aa16.02■□□□□ 0.15
TRIM6-206ENST00000469187 SAMD9LQ8IVG5 1584 aa16.01■□□□□ 0.15
TRIM6-206ENST00000469187 CFAP74Q9C0B2 1584 aa16.01■□□□□ 0.15
TRIM6-206ENST00000469187 DENND4BO75064 1496 aaPredicted RBP16.01■□□□□ 0.15
TRIM6-206ENST00000469187 MBD5Q9P267 1494 aa16.01■□□□□ 0.15
TRIM6-206ENST00000469187 TRAPPC8Q9Y2L5 1435 aa16■□□□□ 0.15
TRIM6-206ENST00000469187 ANKRD30AQ9BXX3 1397 aa15.99■□□□□ 0.15
TRIM6-206ENST00000469187 ARHGEF12Q9NZN5 1544 aa15.99■□□□□ 0.15
TRIM6-206ENST00000469187 CCDC141Q6ZP82 1450 aa15.98■□□□□ 0.15
TRIM6-206ENST00000469187 SYCP2Q9BX26 1530 aa15.98■□□□□ 0.15
TRIM6-206ENST00000469187 PTPRKQ15262 1439 aa15.97■□□□□ 0.15
TRIM6-206ENST00000469187 ARHGEF5Q12774 1597 aa15.96■□□□□ 0.14
TRIM6-206ENST00000469187 ABCC1P33527 1531 aa15.95■□□□□ 0.14
TRIM6-206ENST00000469187 ZNF518AQ6AHZ1 1483 aa15.95■□□□□ 0.14
TRIM6-206ENST00000469187 C9orf84Q5VXU9 1444 aa15.94■□□□□ 0.14
TRIM6-206ENST00000469187 ROCK1Q13464 1354 aa15.94■□□□□ 0.14
TRIM6-206ENST00000469187 DNMT1P26358 1616 aaKnown RBP15.94■□□□□ 0.14
TRIM6-206ENST00000469187 RTEL1-TNFRSF6BF6WH68 1400 aa15.93■□□□□ 0.14
TRIM6-206ENST00000469187 POGZQ7Z3K3 1410 aa15.93■□□□□ 0.14
TRIM6-206ENST00000469187 NCOA1Q15788 1441 aa15.92■□□□□ 0.14
TRIM6-206ENST00000469187 SETD5Q9C0A6 1442 aa15.92■□□□□ 0.14
TRIM6-206ENST00000469187 PPRC1Q5VV67 1664 aaKnown RBP15.92■□□□□ 0.14
TRIM6-206ENST00000469187 ACIN1Q9UKV3 1341 aaKnown RBP15.91■□□□□ 0.14
TRIM6-206ENST00000469187 HRCP23327 699 aa15.9■□□□□ 0.14
TRIM6-206ENST00000469187 TRIM52Q96A61 297 aa15.9■□□□□ 0.14
TRIM6-206ENST00000469187 SHANK2Q9UPX8 1470 aa15.9■□□□□ 0.14
TRIM6-206ENST00000469187 COL17A1Q9UMD9 1497 aaPredicted RBP15.89■□□□□ 0.13
TRIM6-206ENST00000469187 KIF15Q9NS87 1388 aa15.88■□□□□ 0.13
TRIM6-206ENST00000469187 MLH3Q9UHC1 1453 aa15.87■□□□□ 0.13
TRIM6-206ENST00000469187 HFM1A2PYH4 1435 aa15.86■□□□□ 0.13
TRIM6-206ENST00000469187 NAIPQ13075 1403 aa15.85■□□□□ 0.13
TRIM6-206ENST00000469187 ADGRL2O95490 1459 aa15.85■□□□□ 0.13
TRIM6-206ENST00000469187 DHX29Q7Z478 1369 aaKnown RBP15.85■□□□□ 0.13
TRIM6-206ENST00000469187 MAGI2Q86UL8 1455 aa15.84■□□□□ 0.13
TRIM6-206ENST00000469187 KIF3BO15066 747 aa15.84■□□□□ 0.13
TRIM6-206ENST00000469187 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.84■□□□□ 0.13
TRIM6-206ENST00000469187 RAB3GAP2Q9H2M9 1393 aa15.84■□□□□ 0.13
TRIM6-206ENST00000469187 ANKRD50Q9ULJ7 1429 aa15.84■□□□□ 0.13
TRIM6-206ENST00000469187 MAST1Q9Y2H9 1570 aa15.83■□□□□ 0.13
TRIM6-206ENST00000469187 ATP7AQ04656 1500 aa15.83■□□□□ 0.12
TRIM6-206ENST00000469187 ARID4BQ4LE39 1312 aaPredicted RBP15.82■□□□□ 0.12
TRIM6-206ENST00000469187 KDM6BO15054 1643 aa15.81■□□□□ 0.12
TRIM6-206ENST00000469187 KDM5CP41229 1560 aa15.81■□□□□ 0.12
TRIM6-206ENST00000469187 CROCC2H7BZ55 1655 aa15.8■□□□□ 0.12
TRIM6-206ENST00000469187 ATP10AO60312 1499 aa15.8■□□□□ 0.12
TRIM6-206ENST00000469187 GGT6Q6P531 493 aa15.8■□□□□ 0.12
TRIM6-206ENST00000469187 RICTORQ6R327 1708 aa15.8■□□□□ 0.12
TRIM6-206ENST00000469187 DUOX2Q9NRD8 1548 aa15.79■□□□□ 0.12
TRIM6-206ENST00000469187 YEATS2Q9ULM3 1422 aa15.79■□□□□ 0.12
TRIM6-206ENST00000469187 HECW2Q9P2P5 1572 aa15.79■□□□□ 0.12
TRIM6-206ENST00000469187 A2MP01023 1474 aa15.78■□□□□ 0.12
TRIM6-206ENST00000469187 ADGBQ8N7X0 1667 aa15.78■□□□□ 0.12
TRIM6-206ENST00000469187 ZFYVE16Q7Z3T8 1539 aa15.78■□□□□ 0.12
TRIM6-206ENST00000469187 CCER1Q8TC90 406 aaPredicted RBP15.77■□□□□ 0.12
TRIM6-206ENST00000469187 KIDINS220Q9ULH0 1771 aa15.77■□□□□ 0.11
TRIM6-206ENST00000469187 NUP155O75694 1391 aa15.76■□□□□ 0.11
TRIM6-206ENST00000469187 ZMYM4Q5VZL5 1548 aa15.76■□□□□ 0.11
TRIM6-206ENST00000469187 ERBINQ96RT1 1412 aa15.76■□□□□ 0.11
TRIM6-206ENST00000469187 PLXNC1O60486 1568 aa15.75■□□□□ 0.11
TRIM6-206ENST00000469187 FRMPD1Q5SYB0 1578 aa15.75■□□□□ 0.11
TRIM6-206ENST00000469187 INO80Q9ULG1 1556 aaPredicted RBP15.75■□□□□ 0.11
TRIM6-206ENST00000469187 MLECQ14165 292 aa15.75■□□□□ 0.11
TRIM6-206ENST00000469187 MPHOSPH9Q99550 1183 aa15.75■□□□□ 0.11
TRIM6-206ENST00000469187 SLC4A1APQ9BWU0 796 aaKnown RBP15.75■□□□□ 0.11
TRIM6-206ENST00000469187 ESF1Q9H501 851 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms