RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 RICTORQ6R327 1708 aa17.1■□□□□ 0.33
TGFBR3-205ENST00000468996 ZNF777Q9ULD5 760 aaPredicted RBP17.09■□□□□ 0.33
TGFBR3-205ENST00000468996 LRRIQ1Q96JM4 1722 aa17.08■□□□□ 0.32
TGFBR3-205ENST00000468996 POGZQ7Z3K3 1410 aa17.08■□□□□ 0.32
TGFBR3-205ENST00000468996 PTPRMP28827 1452 aa17.07■□□□□ 0.32
TGFBR3-205ENST00000468996 MYO5CQ9NQX4 1742 aa17.07■□□□□ 0.32
TGFBR3-205ENST00000468996 ZFYVE16Q7Z3T8 1539 aa17.06■□□□□ 0.32
TGFBR3-205ENST00000468996 MAGI2Q86UL8 1455 aa17.06■□□□□ 0.32
TGFBR3-205ENST00000468996 LOC105371045A0A1W2PR82 267 aa17.06■□□□□ 0.32
TGFBR3-205ENST00000468996 HECW2Q9P2P5 1572 aa17.06■□□□□ 0.32
TGFBR3-205ENST00000468996 FYCO1Q9BQS8 1478 aa17.05■□□□□ 0.32
TGFBR3-205ENST00000468996 ADAMTSL3P82987 1691 aa17.05■□□□□ 0.32
TGFBR3-205ENST00000468996 ARHGEF40Q8TER5 1519 aa17.05■□□□□ 0.32
TGFBR3-205ENST00000468996 ZMYM4Q5VZL5 1548 aa17.04■□□□□ 0.32
TGFBR3-205ENST00000468996 BCORL1Q5H9F3 1711 aa17.03■□□□□ 0.32
TGFBR3-205ENST00000468996 ATP10AO60312 1499 aa17.02■□□□□ 0.32
TGFBR3-205ENST00000468996 ZNF518AQ6AHZ1 1483 aa17■□□□□ 0.31
TGFBR3-205ENST00000468996 MADDQ8WXG6 1647 aa17■□□□□ 0.31
TGFBR3-205ENST00000468996 MTUS2Q5JR59 1369 aa17■□□□□ 0.31
TGFBR3-205ENST00000468996 CEP162Q5TB80 1403 aa16.99■□□□□ 0.31
TGFBR3-205ENST00000468996 HNRNPMP52272 730 aaKnown RBP eCLIP16.99■□□□□ 0.311e-6■■■□□ 17.5
TGFBR3-205ENST00000468996 CFDP1Q9UEE9 299 aaPredicted RBP16.99■□□□□ 0.31
TGFBR3-205ENST00000468996 C9orf84Q5VXU9 1444 aa16.97■□□□□ 0.31
TGFBR3-205ENST00000468996 TRAPPC8Q9Y2L5 1435 aa16.97■□□□□ 0.31
TGFBR3-205ENST00000468996 CDC42BPBQ9Y5S2 1711 aa16.97■□□□□ 0.31
TGFBR3-205ENST00000468996 CCNB3Q8WWL7 1395 aa16.96■□□□□ 0.31
TGFBR3-205ENST00000468996 ARHGEF12Q9NZN5 1544 aa16.96■□□□□ 0.3
TGFBR3-205ENST00000468996 CEBPAP49715 358 aaPredicted RBP16.95■□□□□ 0.3
TGFBR3-205ENST00000468996 GPATCH8Q9UKJ3 1502 aaKnown RBP16.95■□□□□ 0.3
TGFBR3-205ENST00000468996 RIMS1Q86UR5 1692 aaKnown RBP16.94■□□□□ 0.3
TGFBR3-205ENST00000468996 SIGLEC1Q9BZZ2 1709 aa16.94■□□□□ 0.3
TGFBR3-205ENST00000468996 PREX2Q70Z35 1606 aa16.93■□□□□ 0.3
TGFBR3-205ENST00000468996 HSPA2P54652 639 aa16.93■□□□□ 0.3
TGFBR3-205ENST00000468996 ESF1Q9H501 851 aaKnown RBP16.93■□□□□ 0.3
TGFBR3-205ENST00000468996 ILDR1Q86SU0 546 aaPredicted RBP16.92■□□□□ 0.3
TGFBR3-205ENST00000468996 SPAG9O60271 1321 aaKnown RBP16.92■□□□□ 0.3
TGFBR3-205ENST00000468996 MLH3Q9UHC1 1453 aa16.92■□□□□ 0.3
TGFBR3-205ENST00000468996 ZNF644Q9H582 1327 aaPredicted RBP16.91■□□□□ 0.3
TGFBR3-205ENST00000468996 ABCC1P33527 1531 aa16.91■□□□□ 0.3
TGFBR3-205ENST00000468996 CDC42BPAQ5VT25 1732 aa16.9■□□□□ 0.3
TGFBR3-205ENST00000468996 KDM5CP41229 1560 aa16.9■□□□□ 0.3
TGFBR3-205ENST00000468996 DIP2CQ9Y2E4 1556 aa16.86■□□□□ 0.29
TGFBR3-205ENST00000468996 LMTK3Q96Q04 1460 aa16.86■□□□□ 0.29
TGFBR3-205ENST00000468996 SAMD9LQ8IVG5 1584 aa16.85■□□□□ 0.29
TGFBR3-205ENST00000468996 ITSN2Q9NZM3 1697 aa16.85■□□□□ 0.29
TGFBR3-205ENST00000468996 KIAA1107Q9UPP5 1409 aa16.85■□□□□ 0.29
TGFBR3-205ENST00000468996 SYCP2Q9BX26 1530 aa16.85■□□□□ 0.29
TGFBR3-205ENST00000468996 FER1L4A9Z1Z3 1794 aa16.84■□□□□ 0.29
TGFBR3-205ENST00000468996 PLEKHH2Q8IVE3 1493 aa16.84■□□□□ 0.29
TGFBR3-205ENST00000468996 ABCA6Q8N139 1617 aa16.84■□□□□ 0.29
TGFBR3-205ENST00000468996 EHBP1L1Q8N3D4 1523 aa16.81■□□□□ 0.28
TGFBR3-205ENST00000468996 KIDINS220Q9ULH0 1771 aa16.81■□□□□ 0.28
TGFBR3-205ENST00000468996 GGT6Q6P531 493 aa16.8■□□□□ 0.28
TGFBR3-205ENST00000468996 REREQ9P2R6 1566 aa16.79■□□□□ 0.28
TGFBR3-205ENST00000468996 AGLP35573 1532 aa16.79■□□□□ 0.28
TGFBR3-205ENST00000468996 VPS8Q8N3P4 1428 aa16.79■□□□□ 0.28
TGFBR3-205ENST00000468996 KANK4Q5T7N3 995 aaPredicted RBP16.78■□□□□ 0.28
TGFBR3-205ENST00000468996 NCOA2Q15596 1464 aa16.78■□□□□ 0.28
TGFBR3-205ENST00000468996 TIAM1Q13009 1591 aa16.77■□□□□ 0.28
TGFBR3-205ENST00000468996 APLP2Q06481 763 aa16.76■□□□□ 0.27
TGFBR3-205ENST00000468996 ATP7AQ04656 1500 aa16.75■□□□□ 0.27
TGFBR3-205ENST00000468996 RSPH4AQ5TD94 716 aa16.75■□□□□ 0.27
TGFBR3-205ENST00000468996 A2MP01023 1474 aa16.74■□□□□ 0.27
TGFBR3-205ENST00000468996 MBD5Q9P267 1494 aa16.74■□□□□ 0.27
TGFBR3-205ENST00000468996 TSPY4P0CV99 314 aa16.74■□□□□ 0.27
TGFBR3-205ENST00000468996 TSPY10P0CW01 314 aa16.74■□□□□ 0.27
TGFBR3-205ENST00000468996 UHRF1BP1Q6BDS2 1440 aa16.73■□□□□ 0.27
TGFBR3-205ENST00000468996 ZMYM3Q14202 1370 aa16.73■□□□□ 0.27
TGFBR3-205ENST00000468996 LRRC9Q6ZRR7 1453 aa16.73■□□□□ 0.27
TGFBR3-205ENST00000468996 CNTLNQ9NXG0 1405 aa16.72■□□□□ 0.27
TGFBR3-205ENST00000468996 SUPT6HQ7KZ85 1726 aaKnown RBP16.72■□□□□ 0.27
TGFBR3-205ENST00000468996 KIF3BO15066 747 aa16.71■□□□□ 0.27
TGFBR3-205ENST00000468996 FBXO41Q8TF61 875 aa16.71■□□□□ 0.27
TGFBR3-205ENST00000468996 DMRT2Q9Y5R5 561 aa16.7■□□□□ 0.26
TGFBR3-205ENST00000468996 CAMSAP2Q08AD1 1489 aa16.69■□□□□ 0.26
TGFBR3-205ENST00000468996 RTEL1-TNFRSF6BF6WH68 1400 aa16.69■□□□□ 0.26
TGFBR3-205ENST00000468996 INO80Q9ULG1 1556 aaPredicted RBP16.68■□□□□ 0.26
TGFBR3-205ENST00000468996 DHX29Q7Z478 1369 aaKnown RBP16.68■□□□□ 0.26
TGFBR3-205ENST00000468996 PPP6R1Q9UPN7 881 aa16.68■□□□□ 0.26
TGFBR3-205ENST00000468996 C3P01024 1663 aa16.68■□□□□ 0.26
TGFBR3-205ENST00000468996 PREX1Q8TCU6 1659 aa16.68■□□□□ 0.26
TGFBR3-205ENST00000468996 SETD1BQ9UPS6 1966 aaKnown RBP16.68■□□□□ 0.26
TGFBR3-205ENST00000468996 CCDC141Q6ZP82 1450 aa16.67■□□□□ 0.26
TGFBR3-205ENST00000468996 CERKQ8TCT0 537 aa16.64■□□□□ 0.25
TGFBR3-205ENST00000468996 MAP3K1Q13233 1512 aa16.64■□□□□ 0.25
TGFBR3-205ENST00000468996 PLXNC1O60486 1568 aa16.64■□□□□ 0.25
TGFBR3-205ENST00000468996 WASHC2CQ9Y4E1 1318 aa16.63■□□□□ 0.25
TGFBR3-205ENST00000468996 ADGBQ8N7X0 1667 aa16.62■□□□□ 0.25
TGFBR3-205ENST00000468996 NPATQ14207 1427 aa16.62■□□□□ 0.25
TGFBR3-205ENST00000468996 CLTCQ00610 1675 aaKnown RBP16.61■□□□□ 0.25
TGFBR3-205ENST00000468996 MYOM3Q5VTT5 1437 aa16.61■□□□□ 0.25
TGFBR3-205ENST00000468996 FBXO31Q5XUX0 539 aaPredicted RBP16.6■□□□□ 0.25
TGFBR3-205ENST00000468996 NCKAP5LQ9HCH0 1330 aa16.59■□□□□ 0.25
TGFBR3-205ENST00000468996 PTPRKQ15262 1439 aa16.59■□□□□ 0.25
TGFBR3-205ENST00000468996 MIA2Q96PC5 1412 aa16.59■□□□□ 0.25
TGFBR3-205ENST00000468996 MROH2AA6NES4 1674 aa16.57■□□□□ 0.24
TGFBR3-205ENST00000468996 ARHGEF5Q12774 1597 aa16.57■□□□□ 0.24
TGFBR3-205ENST00000468996 RRP7BPQ9NSQ0 103 aa16.56■□□□□ 0.24
TGFBR3-205ENST00000468996 STRCQ7RTU9 1775 aa16.56■□□□□ 0.24
TGFBR3-205ENST00000468996 PTPRTO14522 1441 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms