RNA–Protein interactions for RNA: ENST00000468479.5

FDPS-207, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 938 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-207ENST00000468479 MADDQ8WXG6 1647 aa20.52■□□□□ 0.88
FDPS-207ENST00000468479 PCF11O94913 1555 aaKnown RBP20.51■□□□□ 0.87
FDPS-207ENST00000468479 EFCAB2Q5VUJ9 269 aa20.51■□□□□ 0.87
FDPS-207ENST00000468479 TTC37Q6PGP7 1564 aa20.51■□□□□ 0.87
FDPS-207ENST00000468479 FYCO1Q9BQS8 1478 aa20.5■□□□□ 0.87
FDPS-207ENST00000468479 KIF14Q15058 1648 aa20.49■□□□□ 0.87
FDPS-207ENST00000468479 PPARGC1BQ86YN6 1023 aaKnown RBP20.48■□□□□ 0.87
FDPS-207ENST00000468479 RIMS1Q86UR5 1692 aaKnown RBP20.47■□□□□ 0.87
FDPS-207ENST00000468479 ARID4BQ4LE39 1312 aaPredicted RBP20.44■□□□□ 0.86
FDPS-207ENST00000468479 LMTK3Q96Q04 1460 aa20.43■□□□□ 0.86
FDPS-207ENST00000468479 SCAPERQ9BY12 1400 aa20.43■□□□□ 0.86
FDPS-207ENST00000468479 MAGI2Q86UL8 1455 aa20.43■□□□□ 0.86
FDPS-207ENST00000468479 FRMPD1Q5SYB0 1578 aa20.42■□□□□ 0.86
FDPS-207ENST00000468479 ARHGAP5Q13017 1502 aa20.4■□□□□ 0.86
FDPS-207ENST00000468479 POGZQ7Z3K3 1410 aa20.4■□□□□ 0.86
FDPS-207ENST00000468479 ZMYM4Q5VZL5 1548 aa20.38■□□□□ 0.85
FDPS-207ENST00000468479 MYO5CQ9NQX4 1742 aa20.38■□□□□ 0.85
FDPS-207ENST00000468479 ARHGEF40Q8TER5 1519 aa20.37■□□□□ 0.85
FDPS-207ENST00000468479 ZFYVE16Q7Z3T8 1539 aa20.36■□□□□ 0.85
FDPS-207ENST00000468479 ZNF518AQ6AHZ1 1483 aa20.36■□□□□ 0.85
FDPS-207ENST00000468479 TIAM1Q13009 1591 aa20.35■□□□□ 0.85
FDPS-207ENST00000468479 RICTORQ6R327 1708 aa20.35■□□□□ 0.85
FDPS-207ENST00000468479 MTUS2Q5JR59 1369 aa20.33■□□□□ 0.84
FDPS-207ENST00000468479 LRRIQ1Q96JM4 1722 aa20.31■□□□□ 0.84
FDPS-207ENST00000468479 HRCP23327 699 aa20.3■□□□□ 0.84
FDPS-207ENST00000468479 MYT1LQ9UL68 1186 aa20.3■□□□□ 0.84
FDPS-207ENST00000468479 YEATS2Q9ULM3 1422 aa20.29■□□□□ 0.84
FDPS-207ENST00000468479 FER1L4A9Z1Z3 1794 aa20.29■□□□□ 0.84
FDPS-207ENST00000468479 KANK4Q5T7N3 995 aaPredicted RBP20.29■□□□□ 0.84
FDPS-207ENST00000468479 LRRC9Q6ZRR7 1453 aa20.28■□□□□ 0.84
FDPS-207ENST00000468479 ATP10AO60312 1499 aa20.27■□□□□ 0.84
FDPS-207ENST00000468479 CCNB3Q8WWL7 1395 aa20.27■□□□□ 0.84
FDPS-207ENST00000468479 PREX2Q70Z35 1606 aa20.27■□□□□ 0.83
FDPS-207ENST00000468479 AFAP1Q8N556 730 aa20.26■□□□□ 0.83
FDPS-207ENST00000468479 C9orf84Q5VXU9 1444 aa20.26■□□□□ 0.83
FDPS-207ENST00000468479 CFDP1Q9UEE9 299 aaPredicted RBP20.25■□□□□ 0.83
FDPS-207ENST00000468479 SIGLEC1Q9BZZ2 1709 aa20.24■□□□□ 0.83
FDPS-207ENST00000468479 HSPA2P54652 639 aa20.24■□□□□ 0.83
FDPS-207ENST00000468479 ZNF777Q9ULD5 760 aaPredicted RBP20.24■□□□□ 0.83
FDPS-207ENST00000468479 KDM5CP41229 1560 aa20.23■□□□□ 0.83
FDPS-207ENST00000468479 GPATCH8Q9UKJ3 1502 aaKnown RBP20.22■□□□□ 0.83
FDPS-207ENST00000468479 PLPPR3Q6T4P5 718 aa20.22■□□□□ 0.83
FDPS-207ENST00000468479 PLEKHH2Q8IVE3 1493 aa20.22■□□□□ 0.83
FDPS-207ENST00000468479 ABCC1P33527 1531 aa20.22■□□□□ 0.83
FDPS-207ENST00000468479 RRBP1Q9P2E9 1410 aaKnown RBP20.21■□□□□ 0.83
FDPS-207ENST00000468479 MLH3Q9UHC1 1453 aa20.21■□□□□ 0.83
FDPS-207ENST00000468479 EHBP1L1Q8N3D4 1523 aa20.21■□□□□ 0.83
FDPS-207ENST00000468479 PREX1Q8TCU6 1659 aa20.19■□□□□ 0.82
FDPS-207ENST00000468479 CDC42BPBQ9Y5S2 1711 aa20.19■□□□□ 0.82
FDPS-207ENST00000468479 MLECQ14165 292 aa20.19■□□□□ 0.82
FDPS-207ENST00000468479 CERKQ8TCT0 537 aa20.19■□□□□ 0.82
FDPS-207ENST00000468479 KIAA1107Q9UPP5 1409 aa20.19■□□□□ 0.82
FDPS-207ENST00000468479 ZEB1P37275 1124 aaPredicted RBP20.18■□□□□ 0.82
FDPS-207ENST00000468479 TRAPPC8Q9Y2L5 1435 aa20.18■□□□□ 0.82
FDPS-207ENST00000468479 DISP3Q9P2K9 1392 aa20.17■□□□□ 0.82
FDPS-207ENST00000468479 SPAG9O60271 1321 aaKnown RBP20.15■□□□□ 0.82
FDPS-207ENST00000468479 ARHGEF12Q9NZN5 1544 aa20.15■□□□□ 0.82
FDPS-207ENST00000468479 CDC42BPAQ5VT25 1732 aa20.15■□□□□ 0.82
FDPS-207ENST00000468479 SPATA31D1Q6ZQQ2 1576 aa20.14■□□□□ 0.81
FDPS-207ENST00000468479 REREQ9P2R6 1566 aa20.12■□□□□ 0.81
FDPS-207ENST00000468479 HNRNPMP52272 730 aaKnown RBP eCLIP20.12■□□□□ 0.81
FDPS-207ENST00000468479 ESF1Q9H501 851 aaKnown RBP20.12■□□□□ 0.81
FDPS-207ENST00000468479 ITSN2Q9NZM3 1697 aa20.12■□□□□ 0.81
FDPS-207ENST00000468479 SYCP2Q9BX26 1530 aa20.12■□□□□ 0.81
FDPS-207ENST00000468479 SAMD9LQ8IVG5 1584 aa20.11■□□□□ 0.81
FDPS-207ENST00000468479 DIP2CQ9Y2E4 1556 aa20.11■□□□□ 0.81
FDPS-207ENST00000468479 ILDR2Q71H61 639 aa20.1■□□□□ 0.81
FDPS-207ENST00000468479 STRCQ7RTU9 1775 aa20.09■□□□□ 0.81
FDPS-207ENST00000468479 SOCS7O14512 581 aa20.09■□□□□ 0.81
FDPS-207ENST00000468479 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.08■□□□□ 0.813e-6■□□□□ 10.4
FDPS-207ENST00000468479 AGLP35573 1532 aa20.07■□□□□ 0.8
FDPS-207ENST00000468479 NCOA2Q15596 1464 aa20.07■□□□□ 0.8
FDPS-207ENST00000468479 RSPH4AQ5TD94 716 aa20.06■□□□□ 0.8
FDPS-207ENST00000468479 ABCA6Q8N139 1617 aa20.05■□□□□ 0.8
FDPS-207ENST00000468479 SUPT6HQ7KZ85 1726 aaKnown RBP20.05■□□□□ 0.8
FDPS-207ENST00000468479 ATP7AQ04656 1500 aa20.02■□□□□ 0.8
FDPS-207ENST00000468479 CNTLNQ9NXG0 1405 aa20.02■□□□□ 0.79
FDPS-207ENST00000468479 ZNF644Q9H582 1327 aaPredicted RBP20.02■□□□□ 0.79
FDPS-207ENST00000468479 KIDINS220Q9ULH0 1771 aa20■□□□□ 0.79
FDPS-207ENST00000468479 RTEL1-TNFRSF6BF6WH68 1400 aa20■□□□□ 0.79
FDPS-207ENST00000468479 MBD5Q9P267 1494 aa19.99■□□□□ 0.79
FDPS-207ENST00000468479 A2MP01023 1474 aa19.98■□□□□ 0.79
FDPS-207ENST00000468479 SETD1BQ9UPS6 1966 aaKnown RBP19.97■□□□□ 0.79
FDPS-207ENST00000468479 INO80Q9ULG1 1556 aaPredicted RBP19.97■□□□□ 0.79
FDPS-207ENST00000468479 CAMSAP2Q08AD1 1489 aa19.97■□□□□ 0.79
FDPS-207ENST00000468479 CCDC141Q6ZP82 1450 aa19.97■□□□□ 0.79
FDPS-207ENST00000468479 TSPY4P0CV99 314 aa19.96■□□□□ 0.79
FDPS-207ENST00000468479 TSPY10P0CW01 314 aa19.96■□□□□ 0.79
FDPS-207ENST00000468479 PPP6R1Q9UPN7 881 aa19.96■□□□□ 0.79
FDPS-207ENST00000468479 MYOM3Q5VTT5 1437 aa19.95■□□□□ 0.78
FDPS-207ENST00000468479 FGD6Q6ZV73 1430 aa19.95■□□□□ 0.78
FDPS-207ENST00000468479 CCER1Q8TC90 406 aaPredicted RBP19.95■□□□□ 0.78
FDPS-207ENST00000468479 UHRF1BP1Q6BDS2 1440 aa19.94■□□□□ 0.78
FDPS-207ENST00000468479 CEBPAP49715 358 aaPredicted RBP19.94■□□□□ 0.78
FDPS-207ENST00000468479 C3P01024 1663 aa19.94■□□□□ 0.78
FDPS-207ENST00000468479 MIA2Q96PC5 1412 aa19.93■□□□□ 0.78
FDPS-207ENST00000468479 PLXNC1O60486 1568 aa19.91■□□□□ 0.78
FDPS-207ENST00000468479 DMRT2Q9Y5R5 561 aa19.91■□□□□ 0.78
FDPS-207ENST00000468479 DHX29Q7Z478 1369 aaKnown RBP19.91■□□□□ 0.78
FDPS-207ENST00000468479 GGT6Q6P531 493 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms