RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 POGZQ7Z3K3 1410 aa23.67■■□□□ 1.38
COL16A1-208ENST00000468459 ARID4BQ4LE39 1312 aaPredicted RBP23.67■■□□□ 1.38
COL16A1-208ENST00000468459 KIF14Q15058 1648 aa23.65■■□□□ 1.38
COL16A1-208ENST00000468459 BCORL1Q5H9F3 1711 aa23.63■■□□□ 1.37
COL16A1-208ENST00000468459 ZFYVE16Q7Z3T8 1539 aa23.62■■□□□ 1.37
COL16A1-208ENST00000468459 LRRIQ1Q96JM4 1722 aa23.6■■□□□ 1.37
COL16A1-208ENST00000468459 CCDC18Q5T9S5 1454 aa23.59■■□□□ 1.37
COL16A1-208ENST00000468459 PCF11O94913 1555 aaKnown RBP23.59■■□□□ 1.37
COL16A1-208ENST00000468459 MADDQ8WXG6 1647 aa23.58■■□□□ 1.36
COL16A1-208ENST00000468459 AFAP1Q8N556 730 aa23.56■■□□□ 1.36
COL16A1-208ENST00000468459 SIGLEC1Q9BZZ2 1709 aa23.55■■□□□ 1.36
COL16A1-208ENST00000468459 MYO5CQ9NQX4 1742 aa23.55■■□□□ 1.36
COL16A1-208ENST00000468459 FYCO1Q9BQS8 1478 aa23.55■■□□□ 1.36
COL16A1-208ENST00000468459 ARHGAP5Q13017 1502 aa23.54■■□□□ 1.36
COL16A1-208ENST00000468459 ATP10AO60312 1499 aa23.54■■□□□ 1.36
COL16A1-208ENST00000468459 ZNF518AQ6AHZ1 1483 aa23.53■■□□□ 1.36
COL16A1-208ENST00000468459 ILDR1Q86SU0 546 aaPredicted RBP23.5■■□□□ 1.35
COL16A1-208ENST00000468459 C9orf84Q5VXU9 1444 aa23.5■■□□□ 1.35
COL16A1-208ENST00000468459 KDM5CP41229 1560 aa23.49■■□□□ 1.35
COL16A1-208ENST00000468459 ARHGEF12Q9NZN5 1544 aa23.49■■□□□ 1.35
COL16A1-208ENST00000468459 MLECQ14165 292 aa23.48■■□□□ 1.35
COL16A1-208ENST00000468459 LMTK3Q96Q04 1460 aa23.47■■□□□ 1.35
COL16A1-208ENST00000468459 TRAPPC8Q9Y2L5 1435 aa23.46■■□□□ 1.35
COL16A1-208ENST00000468459 MLH3Q9UHC1 1453 aa23.45■■□□□ 1.34
COL16A1-208ENST00000468459 CDC42BPBQ9Y5S2 1711 aa23.45■■□□□ 1.34
COL16A1-208ENST00000468459 RIMS1Q86UR5 1692 aaKnown RBP23.44■■□□□ 1.34
COL16A1-208ENST00000468459 VPS8Q8N3P4 1428 aa23.43■■□□□ 1.34
COL16A1-208ENST00000468459 PREX2Q70Z35 1606 aa23.43■■□□□ 1.34
COL16A1-208ENST00000468459 ABCC1P33527 1531 aa23.43■■□□□ 1.34
COL16A1-208ENST00000468459 GPATCH8Q9UKJ3 1502 aaKnown RBP23.42■■□□□ 1.34
COL16A1-208ENST00000468459 DIP2CQ9Y2E4 1556 aa23.38■■□□□ 1.33
COL16A1-208ENST00000468459 REREQ9P2R6 1566 aa23.37■■□□□ 1.33
COL16A1-208ENST00000468459 PLPPR3Q6T4P5 718 aa23.37■■□□□ 1.33
COL16A1-208ENST00000468459 MYT1LQ9UL68 1186 aa23.35■■□□□ 1.33
COL16A1-208ENST00000468459 HSPA2P54652 639 aa23.34■■□□□ 1.33
COL16A1-208ENST00000468459 CDC42BPAQ5VT25 1732 aa23.33■■□□□ 1.33
COL16A1-208ENST00000468459 ZNF777Q9ULD5 760 aaPredicted RBP23.33■■□□□ 1.33
COL16A1-208ENST00000468459 ABCA6Q8N139 1617 aa23.33■■□□□ 1.32
COL16A1-208ENST00000468459 CEBPAP49715 358 aaPredicted RBP23.32■■□□□ 1.32
COL16A1-208ENST00000468459 AGLP35573 1532 aa23.32■■□□□ 1.32
COL16A1-208ENST00000468459 KIAA1107Q9UPP5 1409 aa23.32■■□□□ 1.32
COL16A1-208ENST00000468459 SAMD9LQ8IVG5 1584 aa23.31■■□□□ 1.32
COL16A1-208ENST00000468459 MTUS2Q5JR59 1369 aa23.31■■□□□ 1.32
COL16A1-208ENST00000468459 HNRNPMP52272 730 aaKnown RBP eCLIP23.31■■□□□ 1.32
COL16A1-208ENST00000468459 CFDP1Q9UEE9 299 aaPredicted RBP23.31■■□□□ 1.32
COL16A1-208ENST00000468459 ITSN2Q9NZM3 1697 aa23.31■■□□□ 1.32
COL16A1-208ENST00000468459 FER1L4A9Z1Z3 1794 aa23.29■■□□□ 1.32
COL16A1-208ENST00000468459 CCNB3Q8WWL7 1395 aa23.29■■□□□ 1.32
COL16A1-208ENST00000468459 SYCP2Q9BX26 1530 aa23.27■■□□□ 1.32
COL16A1-208ENST00000468459 KIDINS220Q9ULH0 1771 aa23.27■■□□□ 1.32
COL16A1-208ENST00000468459 SPAG9O60271 1321 aaKnown RBP23.26■■□□□ 1.31
COL16A1-208ENST00000468459 PLEKHH2Q8IVE3 1493 aa23.24■■□□□ 1.31
COL16A1-208ENST00000468459 TIAM1Q13009 1591 aa23.23■■□□□ 1.31
COL16A1-208ENST00000468459 ZNF644Q9H582 1327 aaPredicted RBP23.22■■□□□ 1.31
COL16A1-208ENST00000468459 EHBP1L1Q8N3D4 1523 aa23.21■■□□□ 1.31
COL16A1-208ENST00000468459 MBD5Q9P267 1494 aa23.19■■□□□ 1.3
COL16A1-208ENST00000468459 FBXO41Q8TF61 875 aa23.19■■□□□ 1.3
COL16A1-208ENST00000468459 ATP7AQ04656 1500 aa23.16■■□□□ 1.3
COL16A1-208ENST00000468459 CNTLNQ9NXG0 1405 aa23.16■■□□□ 1.3
COL16A1-208ENST00000468459 MAP3K1Q13233 1512 aa23.14■■□□□ 1.3
COL16A1-208ENST00000468459 ESF1Q9H501 851 aaKnown RBP23.14■■□□□ 1.29
COL16A1-208ENST00000468459 UHRF1BP1Q6BDS2 1440 aa23.14■■□□□ 1.29
COL16A1-208ENST00000468459 INO80Q9ULG1 1556 aaPredicted RBP23.14■■□□□ 1.29
COL16A1-208ENST00000468459 A2MP01023 1474 aa23.13■■□□□ 1.29
COL16A1-208ENST00000468459 KANK4Q5T7N3 995 aaPredicted RBP23.13■■□□□ 1.29
COL16A1-208ENST00000468459 PLXNC1O60486 1568 aa23.13■■□□□ 1.29
COL16A1-208ENST00000468459 NCOA2Q15596 1464 aa23.12■■□□□ 1.29
COL16A1-208ENST00000468459 LRRC9Q6ZRR7 1453 aa23.12■■□□□ 1.29
COL16A1-208ENST00000468459 PREX1Q8TCU6 1659 aa23.12■■□□□ 1.29
COL16A1-208ENST00000468459 ZMYM3Q14202 1370 aa23.1■■□□□ 1.29
COL16A1-208ENST00000468459 RTEL1-TNFRSF6BF6WH68 1400 aa23.09■■□□□ 1.29
COL16A1-208ENST00000468459 C3P01024 1663 aa23.09■■□□□ 1.29
COL16A1-208ENST00000468459 SETD1BQ9UPS6 1966 aaKnown RBP23.08■■□□□ 1.29
COL16A1-208ENST00000468459 APLP2Q06481 763 aa23.07■■□□□ 1.28
COL16A1-208ENST00000468459 NPATQ14207 1427 aa23.06■■□□□ 1.28
COL16A1-208ENST00000468459 RSPH4AQ5TD94 716 aa23.04■■□□□ 1.28
COL16A1-208ENST00000468459 GGT6Q6P531 493 aa23.04■■□□□ 1.28
COL16A1-208ENST00000468459 PPP6R1Q9UPN7 881 aa23.04■■□□□ 1.28
COL16A1-208ENST00000468459 DHX29Q7Z478 1369 aaKnown RBP23.03■■□□□ 1.28
COL16A1-208ENST00000468459 DMRT2Q9Y5R5 561 aa23.03■■□□□ 1.28
COL16A1-208ENST00000468459 SUPT6HQ7KZ85 1726 aaKnown RBP23.02■■□□□ 1.28
COL16A1-208ENST00000468459 CERKQ8TCT0 537 aa23.02■■□□□ 1.28
COL16A1-208ENST00000468459 CAMSAP2Q08AD1 1489 aa23.01■■□□□ 1.27
COL16A1-208ENST00000468459 CCDC141Q6ZP82 1450 aa23.01■■□□□ 1.27
COL16A1-208ENST00000468459 STRCQ7RTU9 1775 aa23■■□□□ 1.27
COL16A1-208ENST00000468459 MROH2AA6NES4 1674 aa22.98■■□□□ 1.27
COL16A1-208ENST00000468459 PTPRKQ15262 1439 aa22.98■■□□□ 1.27
COL16A1-208ENST00000468459 PTPRTO14522 1441 aa22.97■■□□□ 1.27
COL16A1-208ENST00000468459 NCOA1Q15788 1441 aa22.96■■□□□ 1.27
COL16A1-208ENST00000468459 ADGBQ8N7X0 1667 aa22.96■■□□□ 1.27
COL16A1-208ENST00000468459 PPARGC1BQ86YN6 1023 aaKnown RBP22.94■■□□□ 1.26
COL16A1-208ENST00000468459 KIF3BO15066 747 aa22.93■■□□□ 1.26
COL16A1-208ENST00000468459 ARHGEF5Q12774 1597 aa22.93■■□□□ 1.26
COL16A1-208ENST00000468459 CLTCQ00610 1675 aaKnown RBP22.91■■□□□ 1.26
COL16A1-208ENST00000468459 TSPY4P0CV99 314 aa22.91■■□□□ 1.26
COL16A1-208ENST00000468459 TSPY10P0CW01 314 aa22.91■■□□□ 1.26
COL16A1-208ENST00000468459 MIA2Q96PC5 1412 aa22.89■■□□□ 1.25
COL16A1-208ENST00000468459 MYOM3Q5VTT5 1437 aa22.87■■□□□ 1.25
COL16A1-208ENST00000468459 CAMSAP1Q5T5Y3 1602 aa22.86■■□□□ 1.25
COL16A1-208ENST00000468459 FBXO31Q5XUX0 539 aaPredicted RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms