RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 RICTORQ6R327 1708 aa41.2■■■■■ 4.19
PDCD4-205ENST00000467574 GPATCH8Q9UKJ3 1502 aaKnown RBP41.13■■■■■ 4.18
PDCD4-205ENST00000467574 ADGRL1O94910 1474 aa41.13■■■■■ 4.17
PDCD4-205ENST00000467574 LRRC9Q6ZRR7 1453 aa41.13■■■■■ 4.17
PDCD4-205ENST00000467574 SUPT6HQ7KZ85 1726 aaKnown RBP41.12■■■■■ 4.17
PDCD4-205ENST00000467574 DENND4BO75064 1496 aaPredicted RBP41.11■■■■■ 4.17
PDCD4-205ENST00000467574 EFCAB2Q5VUJ9 269 aa41.11■■■■■ 4.17
PDCD4-205ENST00000467574 RAPGEF3O95398 923 aa41.09■■■■■ 4.17
PDCD4-205ENST00000467574 SCAPERQ9BY12 1400 aa41.04■■■■■ 4.16
PDCD4-205ENST00000467574 ABCC1P33527 1531 aa41.03■■■■■ 4.16
PDCD4-205ENST00000467574 NCOA2Q15596 1464 aa41.03■■■■■ 4.16
PDCD4-205ENST00000467574 ITSN2Q9NZM3 1697 aa41.03■■■■■ 4.16
PDCD4-205ENST00000467574 ZMYM4Q5VZL5 1548 aa41.03■■■■■ 4.16
PDCD4-205ENST00000467574 POGZQ7Z3K3 1410 aa41.02■■■■■ 4.16
PDCD4-205ENST00000467574 CCNB3Q8WWL7 1395 aa41.01■■■■■ 4.16
PDCD4-205ENST00000467574 SAMD9LQ8IVG5 1584 aa41■■■■■ 4.15
PDCD4-205ENST00000467574 KANK4Q5T7N3 995 aaPredicted RBP40.99■■■■■ 4.15
PDCD4-205ENST00000467574 ARHGEF12Q9NZN5 1544 aa40.95■■■■■ 4.15
PDCD4-205ENST00000467574 ARHGEF40Q8TER5 1519 aa40.93■■■■■ 4.14
PDCD4-205ENST00000467574 KDM5CP41229 1560 aa40.91■■■■■ 4.14
PDCD4-205ENST00000467574 ZNF518AQ6AHZ1 1483 aa40.89■■■■■ 4.14
PDCD4-205ENST00000467574 CFDP1Q9UEE9 299 aaPredicted RBP40.86■■■■■ 4.13
PDCD4-205ENST00000467574 SYCP2Q9BX26 1530 aa40.86■■■■■ 4.13
PDCD4-205ENST00000467574 APLP2Q06481 763 aa40.83■■■■■ 4.13
PDCD4-205ENST00000467574 TRAPPC8Q9Y2L5 1435 aa40.83■■■■■ 4.13
PDCD4-205ENST00000467574 MAGI2Q86UL8 1455 aa40.83■■■■■ 4.13
PDCD4-205ENST00000467574 ZFYVE16Q7Z3T8 1539 aa40.82■■■■■ 4.12
PDCD4-205ENST00000467574 PLEKHH2Q8IVE3 1493 aa40.79■■■■■ 4.12
PDCD4-205ENST00000467574 YEATS2Q9ULM3 1422 aa40.79■■■■■ 4.12
PDCD4-205ENST00000467574 KIAA1107Q9UPP5 1409 aa40.79■■■■■ 4.12
PDCD4-205ENST00000467574 ZNF777Q9ULD5 760 aaPredicted RBP40.79■■■■■ 4.12
PDCD4-205ENST00000467574 HECW2Q9P2P5 1572 aa40.78■■■■■ 4.12
PDCD4-205ENST00000467574 AFAP1Q8N556 730 aa40.76■■■■■ 4.12
PDCD4-205ENST00000467574 ZNF644Q9H582 1327 aaPredicted RBP40.72■■■■■ 4.11
PDCD4-205ENST00000467574 SIGLEC1Q9BZZ2 1709 aa40.71■■■■■ 4.11
PDCD4-205ENST00000467574 CAMSAP2Q08AD1 1489 aa40.7■■■■■ 4.11
PDCD4-205ENST00000467574 MLH3Q9UHC1 1453 aa40.7■■■■■ 4.11
PDCD4-205ENST00000467574 MYOM3Q5VTT5 1437 aa40.69■■■■■ 4.1
PDCD4-205ENST00000467574 MBD5Q9P267 1494 aa40.68■■■■■ 4.1
PDCD4-205ENST00000467574 KIDINS220Q9ULH0 1771 aa40.68■■■■■ 4.1
PDCD4-205ENST00000467574 KDM4FA0A1W2PPD8 638 aa40.66■■■■■ 4.1
PDCD4-205ENST00000467574 HNRNPMP52272 730 aaKnown RBP eCLIP40.66■■■■■ 4.1
PDCD4-205ENST00000467574 ABCA6Q8N139 1617 aa40.66■■■■■ 4.1
PDCD4-205ENST00000467574 DIP2CQ9Y2E4 1556 aa40.65■■■■■ 4.1
PDCD4-205ENST00000467574 INO80Q9ULG1 1556 aaPredicted RBP40.61■■■■■ 4.09
PDCD4-205ENST00000467574 MIA2Q96PC5 1412 aa40.61■■■■■ 4.09
PDCD4-205ENST00000467574 ATP10AO60312 1499 aa40.58■■■■■ 4.09
PDCD4-205ENST00000467574 C9orf84Q5VXU9 1444 aa40.56■■■■■ 4.08
PDCD4-205ENST00000467574 ARHGEF5Q12774 1597 aa40.56■■■■■ 4.08
PDCD4-205ENST00000467574 BCORL1Q5H9F3 1711 aa40.56■■■■■ 4.08
PDCD4-205ENST00000467574 REREQ9P2R6 1566 aa40.55■■■■■ 4.08
PDCD4-205ENST00000467574 ATP7AQ04656 1500 aa40.54■■■■■ 4.08
PDCD4-205ENST00000467574 CCDC141Q6ZP82 1450 aa40.51■■■■■ 4.08
PDCD4-205ENST00000467574 ADAMTSL3P82987 1691 aa40.51■■■■■ 4.08
PDCD4-205ENST00000467574 PTPN23Q9H3S7 1636 aa40.5■■■■■ 4.07
PDCD4-205ENST00000467574 SPAG9O60271 1321 aaKnown RBP40.49■■■■■ 4.07
PDCD4-205ENST00000467574 FGD6Q6ZV73 1430 aa40.48■■■■■ 4.07
PDCD4-205ENST00000467574 MYT1LQ9UL68 1186 aa40.43■■■■■ 4.06
PDCD4-205ENST00000467574 TCOF1Q13428 1488 aaKnown RBP40.43■■■■■ 4.06
PDCD4-205ENST00000467574 ARID4BQ4LE39 1312 aaPredicted RBP40.41■■■■■ 4.06
PDCD4-205ENST00000467574 RTEL1-TNFRSF6BF6WH68 1400 aa40.39■■■■■ 4.06
PDCD4-205ENST00000467574 MADDQ8WXG6 1647 aa40.38■■■■■ 4.06
PDCD4-205ENST00000467574 PLXNC1O60486 1568 aa40.37■■■■■ 4.05
PDCD4-205ENST00000467574 RSPH4AQ5TD94 716 aa40.37■■■■■ 4.05
PDCD4-205ENST00000467574 ADGBQ8N7X0 1667 aa40.37■■■■■ 4.05
PDCD4-205ENST00000467574 AGLP35573 1532 aa40.37■■■■■ 4.05
PDCD4-205ENST00000467574 MAST1Q9Y2H9 1570 aa40.35■■■■■ 4.05
PDCD4-205ENST00000467574 CROCC2H7BZ55 1655 aa40.35■■■■■ 4.05
PDCD4-205ENST00000467574 AEBP2Q6ZN18 517 aaPredicted RBP40.32■■■■■ 4.05
PDCD4-205ENST00000467574 DNMT1P26358 1616 aaKnown RBP40.3■■■■■ 4.04
PDCD4-205ENST00000467574 A2MP01023 1474 aa40.28■■■■■ 4.04
PDCD4-205ENST00000467574 FER1L4A9Z1Z3 1794 aa40.28■■■■■ 4.04
PDCD4-205ENST00000467574 PPARGC1BQ86YN6 1023 aaKnown RBP40.27■■■■■ 4.04
PDCD4-205ENST00000467574 RIMS1Q86UR5 1692 aaKnown RBP40.26■■■■■ 4.04
PDCD4-205ENST00000467574 ABCC5O15440 1437 aa40.25■■■■■ 4.03
PDCD4-205ENST00000467574 SHANK2Q9UPX8 1470 aa40.23■■■■■ 4.03
PDCD4-205ENST00000467574 DAPK1P53355 1430 aa40.2■■■■■ 4.03
PDCD4-205ENST00000467574 MLECQ14165 292 aa40.19■■■■■ 4.02
PDCD4-205ENST00000467574 PTPRMP28827 1452 aa40.19■■■■■ 4.02
PDCD4-205ENST00000467574 TSPY4P0CV99 314 aa40.18■■■■■ 4.02
PDCD4-205ENST00000467574 TSPY10P0CW01 314 aa40.18■■■■■ 4.02
PDCD4-205ENST00000467574 DHX29Q7Z478 1369 aaKnown RBP40.12■■■■■ 4.01
PDCD4-205ENST00000467574 FAM50AQ14320 339 aaKnown RBP40.06■■■■■ 4
PDCD4-205ENST00000467574 EIF2AK4Q9P2K8 1649 aaKnown RBP39.99■■■■□ 3.99
PDCD4-205ENST00000467574 DUOX2Q9NRD8 1548 aa39.99■■■■□ 3.99
PDCD4-205ENST00000467574 ADGRL2O95490 1459 aa39.99■■■■□ 3.99
PDCD4-205ENST00000467574 RRBP1Q9P2E9 1410 aaKnown RBP39.98■■■■□ 3.99
PDCD4-205ENST00000467574 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.97■■■■□ 3.991e-6■□□□□ 9.9
PDCD4-205ENST00000467574 KIF15Q9NS87 1388 aa39.97■■■■□ 3.99
PDCD4-205ENST00000467574 RNF17Q9BXT8 1623 aaKnown RBP39.95■■■■□ 3.99
PDCD4-205ENST00000467574 PTPRKQ15262 1439 aa39.95■■■■□ 3.99
PDCD4-205ENST00000467574 MROH2AA6NES4 1674 aa39.95■■■■□ 3.99
PDCD4-205ENST00000467574 C3P01024 1663 aa39.94■■■■□ 3.98
PDCD4-205ENST00000467574 CLTCQ00610 1675 aaKnown RBP39.92■■■■□ 3.98
PDCD4-205ENST00000467574 NCOA1Q15788 1441 aa39.91■■■■□ 3.98
PDCD4-205ENST00000467574 CNTLNQ9NXG0 1405 aa39.91■■■■□ 3.98
PDCD4-205ENST00000467574 ANKRD30AQ9BXX3 1397 aa39.89■■■■□ 3.98
PDCD4-205ENST00000467574 CHIC2Q9UKJ5 165 aa39.89■■■■□ 3.98
PDCD4-205ENST00000467574 KIF3BO15066 747 aa39.88■■■■□ 3.97
PDCD4-205ENST00000467574 GGT6Q6P531 493 aa39.87■■■■□ 3.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms