RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 HFM1A2PYH4 1435 aa18.32■□□□□ 0.52
HDLBP-231ENST00000467435 DAPK1P53355 1430 aa18.32■□□□□ 0.52
HDLBP-231ENST00000467435 DHX57Q6P158 1386 aaKnown RBP18.31■□□□□ 0.52
HDLBP-231ENST00000467435 AKNAQ7Z591 1439 aa18.31■□□□□ 0.52
HDLBP-231ENST00000467435 CFDP1Q9UEE9 299 aaPredicted RBP18.29■□□□□ 0.52
HDLBP-231ENST00000467435 SAMD9LQ8IVG5 1584 aa18.28■□□□□ 0.52
HDLBP-231ENST00000467435 ABCC5O15440 1437 aa18.26■□□□□ 0.51
HDLBP-231ENST00000467435 NAIPQ13075 1403 aa18.26■□□□□ 0.51
HDLBP-231ENST00000467435 WDR7Q9Y4E6 1490 aa18.26■□□□□ 0.51
HDLBP-231ENST00000467435 ZNF644Q9H582 1327 aaPredicted RBP18.25■□□□□ 0.51
HDLBP-231ENST00000467435 ARHGAP5Q13017 1502 aa18.25■□□□□ 0.51
HDLBP-231ENST00000467435 ARHGEF5Q12774 1597 aa18.25■□□□□ 0.51
HDLBP-231ENST00000467435 RIMBP3CA6NJZ7 1639 aa18.24■□□□□ 0.51
HDLBP-231ENST00000467435 RIMBP3BA6NNM3 1639 aa18.24■□□□□ 0.51
HDLBP-231ENST00000467435 RIMBP3Q9UFD9 1639 aa18.24■□□□□ 0.51
HDLBP-231ENST00000467435 ZNF777Q9ULD5 760 aaPredicted RBP18.22■□□□□ 0.51
HDLBP-231ENST00000467435 CLSPNQ9HAW4 1339 aa18.22■□□□□ 0.51
HDLBP-231ENST00000467435 SHANK2Q9UPX8 1470 aa18.21■□□□□ 0.51
HDLBP-231ENST00000467435 ROCK1Q13464 1354 aa18.21■□□□□ 0.51
HDLBP-231ENST00000467435 ABCA9Q8IUA7 1624 aa18.21■□□□□ 0.51
HDLBP-231ENST00000467435 KDM6BO15054 1643 aa18.2■□□□□ 0.5
HDLBP-231ENST00000467435 MAPKBP1O60336 1514 aa18.2■□□□□ 0.5
HDLBP-231ENST00000467435 ADGRL2O95490 1459 aa18.2■□□□□ 0.5
HDLBP-231ENST00000467435 CHIC2Q9UKJ5 165 aa18.19■□□□□ 0.5
HDLBP-231ENST00000467435 ARAP3Q8WWN8 1544 aa18.18■□□□□ 0.5
HDLBP-231ENST00000467435 SYCP2Q9BX26 1530 aa18.18■□□□□ 0.5
HDLBP-231ENST00000467435 ASXL2Q76L83 1435 aa18.17■□□□□ 0.5
HDLBP-231ENST00000467435 KCNH8Q96L42 1107 aa18.17■□□□□ 0.5
HDLBP-231ENST00000467435 RRP7BPQ9NSQ0 103 aa18.16■□□□□ 0.5
HDLBP-231ENST00000467435 PLCH2O75038 1416 aa18.15■□□□□ 0.5
HDLBP-231ENST00000467435 CCDC141Q6ZP82 1450 aa18.15■□□□□ 0.5
HDLBP-231ENST00000467435 PLEKHH2Q8IVE3 1493 aa18.15■□□□□ 0.5
HDLBP-231ENST00000467435 ABCC1P33527 1531 aa18.15■□□□□ 0.5
HDLBP-231ENST00000467435 MBD5Q9P267 1494 aa18.14■□□□□ 0.5
HDLBP-231ENST00000467435 MAST1Q9Y2H9 1570 aa18.13■□□□□ 0.49
HDLBP-231ENST00000467435 C9orf84Q5VXU9 1444 aa18.13■□□□□ 0.49
HDLBP-231ENST00000467435 NPM1P06748 294 aaKnown RBP eCLIP18.11■□□□□ 0.49
HDLBP-231ENST00000467435 NCOA1Q15788 1441 aa18.1■□□□□ 0.49
HDLBP-231ENST00000467435 KIAA1107Q9UPP5 1409 aa18.09■□□□□ 0.49
HDLBP-231ENST00000467435 ANKRD30AQ9BXX3 1397 aa18.09■□□□□ 0.49
HDLBP-231ENST00000467435 PLXNC1O60486 1568 aa18.08■□□□□ 0.48
HDLBP-231ENST00000467435 CFAP74Q9C0B2 1584 aa18.07■□□□□ 0.48
HDLBP-231ENST00000467435 HNRNPMP52272 730 aaKnown RBP eCLIP18.06■□□□□ 0.48
HDLBP-231ENST00000467435 ARHGEF12Q9NZN5 1544 aa18.06■□□□□ 0.48
HDLBP-231ENST00000467435 EFCAB2Q5VUJ9 269 aa18.04■□□□□ 0.48
HDLBP-231ENST00000467435 FANCAO15360 1455 aa18.03■□□□□ 0.48
HDLBP-231ENST00000467435 RSPH4AQ5TD94 716 aa18.03■□□□□ 0.48
HDLBP-231ENST00000467435 ACIN1Q9UKV3 1341 aaKnown RBP18.02■□□□□ 0.48
HDLBP-231ENST00000467435 TSPY4P0CV99 314 aa18.02■□□□□ 0.48
HDLBP-231ENST00000467435 TSPY10P0CW01 314 aa18.02■□□□□ 0.48
HDLBP-231ENST00000467435 ANKRD50Q9ULJ7 1429 aa18■□□□□ 0.47
HDLBP-231ENST00000467435 KIF15Q9NS87 1388 aa18■□□□□ 0.47
HDLBP-231ENST00000467435 CYB5RLQ6IPT4 315 aa17.99■□□□□ 0.47
HDLBP-231ENST00000467435 TRIM52Q96A61 297 aa17.99■□□□□ 0.47
HDLBP-231ENST00000467435 DENND4BO75064 1496 aaPredicted RBP17.99■□□□□ 0.47
HDLBP-231ENST00000467435 MAP3K4Q9Y6R4 1608 aa17.98■□□□□ 0.47
HDLBP-231ENST00000467435 INO80Q9ULG1 1556 aaPredicted RBP17.98■□□□□ 0.47
HDLBP-231ENST00000467435 ZFYVE16Q7Z3T8 1539 aa17.98■□□□□ 0.47
HDLBP-231ENST00000467435 ADGRL1O94910 1474 aa17.97■□□□□ 0.47
HDLBP-231ENST00000467435 KDM5DQ9BY66 1539 aa17.97■□□□□ 0.47
HDLBP-231ENST00000467435 TRAPPC8Q9Y2L5 1435 aa17.97■□□□□ 0.47
HDLBP-231ENST00000467435 UNC13BO14795 1591 aa17.96■□□□□ 0.46
HDLBP-231ENST00000467435 GLI2P10070 1586 aa17.96■□□□□ 0.46
HDLBP-231ENST00000467435 PZPP20742 1482 aa17.95■□□□□ 0.46
HDLBP-231ENST00000467435 CD109Q6YHK3 1445 aa17.95■□□□□ 0.46
HDLBP-231ENST00000467435 DUOX2Q9NRD8 1548 aa17.94■□□□□ 0.46
HDLBP-231ENST00000467435 DIP2BQ9P265 1576 aa17.93■□□□□ 0.46
HDLBP-231ENST00000467435 ATP7AQ04656 1500 aa17.93■□□□□ 0.46
HDLBP-231ENST00000467435 SIN3AQ96ST3 1273 aa17.91■□□□□ 0.46
HDLBP-231ENST00000467435 MPHOSPH9Q99550 1183 aa17.91■□□□□ 0.46
HDLBP-231ENST00000467435 RTEL1-TNFRSF6BF6WH68 1400 aa17.9■□□□□ 0.46
HDLBP-231ENST00000467435 ERBINQ96RT1 1412 aa17.89■□□□□ 0.46
HDLBP-231ENST00000467435 SCAPERQ9BY12 1400 aa17.89■□□□□ 0.46
HDLBP-231ENST00000467435 NEUROD1Q13562 356 aa17.88■□□□□ 0.45
HDLBP-231ENST00000467435 NEO1Q92859 1461 aa17.88■□□□□ 0.45
HDLBP-231ENST00000467435 IQGAP3Q86VI3 1631 aa17.87■□□□□ 0.45
HDLBP-231ENST00000467435 ZNF518AQ6AHZ1 1483 aa17.87■□□□□ 0.45
HDLBP-231ENST00000467435 KDM5CP41229 1560 aa17.87■□□□□ 0.45
HDLBP-231ENST00000467435 KIDINS220Q9ULH0 1771 aa17.86■□□□□ 0.45
HDLBP-231ENST00000467435 SPAG9O60271 1321 aaKnown RBP17.86■□□□□ 0.45
HDLBP-231ENST00000467435 POGZQ7Z3K3 1410 aa17.85■□□□□ 0.45
HDLBP-231ENST00000467435 MAGI2Q86UL8 1455 aa17.85■□□□□ 0.45
HDLBP-231ENST00000467435 SLC4A1APQ9BWU0 796 aaKnown RBP17.85■□□□□ 0.45
HDLBP-231ENST00000467435 EIF2AK4Q9P2K8 1649 aaKnown RBP17.85■□□□□ 0.45
HDLBP-231ENST00000467435 HECW2Q9P2P5 1572 aa17.85■□□□□ 0.45
HDLBP-231ENST00000467435 FAM135AQ9P2D6 1515 aa17.84■□□□□ 0.45
HDLBP-231ENST00000467435 TIMELESSQ9UNS1 1208 aa17.84■□□□□ 0.45
HDLBP-231ENST00000467435 KIF13AQ9H1H9 1805 aa17.84■□□□□ 0.45
HDLBP-231ENST00000467435 PPRC1Q5VV67 1664 aaKnown RBP17.83■□□□□ 0.45
HDLBP-231ENST00000467435 DEPDC5O75140 1603 aa17.83■□□□□ 0.45
HDLBP-231ENST00000467435 NUP155O75694 1391 aa17.83■□□□□ 0.45
HDLBP-231ENST00000467435 TONSLQ96HA7 1378 aa17.83■□□□□ 0.45
HDLBP-231ENST00000467435 AFAP1Q8N556 730 aa17.83■□□□□ 0.44
HDLBP-231ENST00000467435 TSPOAP1O95153 1857 aa17.83■□□□□ 0.44
HDLBP-231ENST00000467435 RICTORQ6R327 1708 aa17.83■□□□□ 0.44
HDLBP-231ENST00000467435 ANKRD30BQ9BXX2 1392 aa17.81■□□□□ 0.44
HDLBP-231ENST00000467435 FOXD1Q16676 465 aa17.8■□□□□ 0.44
HDLBP-231ENST00000467435 DNAJC5Q9H3Z4 198 aa17.8■□□□□ 0.44
HDLBP-231ENST00000467435 RPRD2Q5VT52 1461 aaKnown RBP17.79■□□□□ 0.44
HDLBP-231ENST00000467435 ABCA6Q8N139 1617 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms