RNA–Protein interactions for RNA: ENST00000467411.5

CDCA7-206, Transcript of cell division cycle associated 7, humanhuman

TSL 1 (best)

Gene CDCA7, Length 3,176 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-206ENST00000467411 DAPK1P53355 1430 aa15.28■□□□□ 0.04
CDCA7-206ENST00000467411 ADGRL2O95490 1459 aa15.28■□□□□ 0.04
CDCA7-206ENST00000467411 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.27■□□□□ 0.041e-11■■■□□ 19.1
CDCA7-206ENST00000467411 SHANK2Q9UPX8 1470 aa15.27■□□□□ 0.04
CDCA7-206ENST00000467411 MYO5CQ9NQX4 1742 aa15.27■□□□□ 0.03
CDCA7-206ENST00000467411 TTC37Q6PGP7 1564 aa15.27■□□□□ 0.03
CDCA7-206ENST00000467411 ARAP3Q8WWN8 1544 aa15.26■□□□□ 0.03
CDCA7-206ENST00000467411 ABCC5O15440 1437 aa15.26■□□□□ 0.03
CDCA7-206ENST00000467411 FAM50AQ14320 339 aaKnown RBP15.25■□□□□ 0.03
CDCA7-206ENST00000467411 SAMD9LQ8IVG5 1584 aa15.23■□□□□ 0.03
CDCA7-206ENST00000467411 MAST1Q9Y2H9 1570 aa15.23■□□□□ 0.03
CDCA7-206ENST00000467411 PLEKHD1A6NEE1 506 aa15.23■□□□□ 0.03
CDCA7-206ENST00000467411 OSCARQ8IYS5 282 aa15.21■□□□□ 0.03
CDCA7-206ENST00000467411 ACIN1Q9UKV3 1341 aaKnown RBP15.21■□□□□ 0.02
CDCA7-206ENST00000467411 KDM6BO15054 1643 aa15.2■□□□□ 0.02
CDCA7-206ENST00000467411 ABCA9Q8IUA7 1624 aa15.2■□□□□ 0.02
CDCA7-206ENST00000467411 MBD5Q9P267 1494 aa15.19■□□□□ 0.02
CDCA7-206ENST00000467411 ARID3CA6NKF2 412 aa15.16■□□□□ 0.02
CDCA7-206ENST00000467411 KIAA1107Q9UPP5 1409 aa15.16■□□□□ 0.02
CDCA7-206ENST00000467411 WDR7Q9Y4E6 1490 aa15.15■□□□□ 0.02
CDCA7-206ENST00000467411 DENND4BO75064 1496 aaPredicted RBP15.15■□□□□ 0.02
CDCA7-206ENST00000467411 PLEKHH2Q8IVE3 1493 aa15.14■□□□□ 0.01
CDCA7-206ENST00000467411 PLCH2O75038 1416 aa15.14■□□□□ 0.01
CDCA7-206ENST00000467411 PLXNC1O60486 1568 aa15.14■□□□□ 0.01
CDCA7-206ENST00000467411 NCOA1Q15788 1441 aa15.13■□□□□ 0.01
CDCA7-206ENST00000467411 CFDP1Q9UEE9 299 aaPredicted RBP15.13■□□□□ 0.01
CDCA7-206ENST00000467411 ITGAEP38570 1179 aa15.12■□□□□ 0.01
CDCA7-206ENST00000467411 KDM5DQ9BY66 1539 aa15.12■□□□□ 0.01
CDCA7-206ENST00000467411 ZNF644Q9H582 1327 aaPredicted RBP15.12■□□□□ 0.01
CDCA7-206ENST00000467411 ABCC1P33527 1531 aa15.12■□□□□ 0.01
CDCA7-206ENST00000467411 CCDC141Q6ZP82 1450 aa15.1■□□□□ 0.01
CDCA7-206ENST00000467411 RSPH4AQ5TD94 716 aa15.08■□□□□ 0.01
CDCA7-206ENST00000467411 ARHGAP5Q13017 1502 aa15.08■□□□□ 0
CDCA7-206ENST00000467411 SYCP2Q9BX26 1530 aa15.08■□□□□ 0
CDCA7-206ENST00000467411 C9orf84Q5VXU9 1444 aa15.07■□□□□ 0
CDCA7-206ENST00000467411 TIMELESSQ9UNS1 1208 aa15.07■□□□□ 0
CDCA7-206ENST00000467411 ARHGEF12Q9NZN5 1544 aa15.06■□□□□ 0
CDCA7-206ENST00000467411 RIMBP3CA6NJZ7 1639 aa15.06■□□□□ 0
CDCA7-206ENST00000467411 RIMBP3BA6NNM3 1639 aa15.06■□□□□ 0
CDCA7-206ENST00000467411 RIMBP3Q9UFD9 1639 aa15.06■□□□□ 0
CDCA7-206ENST00000467411 ASXL2Q76L83 1435 aa15.05■□□□□ 0
CDCA7-206ENST00000467411 UNC13BO14795 1591 aa15.04■□□□□ -0
CDCA7-206ENST00000467411 CFAP74Q9C0B2 1584 aa15.04■□□□□ -0
CDCA7-206ENST00000467411 ANKRD30AQ9BXX3 1397 aa15.04■□□□□ -0
CDCA7-206ENST00000467411 PZPP20742 1482 aa15.02■□□□□ -0
CDCA7-206ENST00000467411 GLI2P10070 1586 aa15.01□□□□□ -0.01
CDCA7-206ENST00000467411 INO80Q9ULG1 1556 aaPredicted RBP15.01□□□□□ -0.01
CDCA7-206ENST00000467411 MAGI2Q86UL8 1455 aa15.01□□□□□ -0.01
CDCA7-206ENST00000467411 RTEL1-TNFRSF6BF6WH68 1400 aa15□□□□□ -0.01
CDCA7-206ENST00000467411 MAP3K4Q9Y6R4 1608 aa14.99□□□□□ -0.01
CDCA7-206ENST00000467411 RRP7BPQ9NSQ0 103 aa14.99□□□□□ -0.01
CDCA7-206ENST00000467411 ZFYVE16Q7Z3T8 1539 aa14.98□□□□□ -0.01
CDCA7-206ENST00000467411 DUOX2Q9NRD8 1548 aa14.98□□□□□ -0.01
CDCA7-206ENST00000467411 ANKRD50Q9ULJ7 1429 aa14.98□□□□□ -0.01
CDCA7-206ENST00000467411 CHIC2Q9UKJ5 165 aa14.97□□□□□ -0.01
CDCA7-206ENST00000467411 DEPDC5O75140 1603 aa14.97□□□□□ -0.01
CDCA7-206ENST00000467411 IQGAP3Q86VI3 1631 aa14.96□□□□□ -0.01
CDCA7-206ENST00000467411 ERBINQ96RT1 1412 aa14.96□□□□□ -0.01
CDCA7-206ENST00000467411 EIF2AK4Q9P2K8 1649 aaKnown RBP14.95□□□□□ -0.02
CDCA7-206ENST00000467411 FANCAO15360 1455 aa14.94□□□□□ -0.02
CDCA7-206ENST00000467411 BCORL1Q5H9F3 1711 aa14.94□□□□□ -0.02
CDCA7-206ENST00000467411 KDM5CP41229 1560 aa14.94□□□□□ -0.02
CDCA7-206ENST00000467411 EFCAB2Q5VUJ9 269 aa14.93□□□□□ -0.02
CDCA7-206ENST00000467411 ANKRD30BQ9BXX2 1392 aa14.93□□□□□ -0.02
CDCA7-206ENST00000467411 KIF15Q9NS87 1388 aa14.93□□□□□ -0.02
CDCA7-206ENST00000467411 HNRNPMP52272 730 aaKnown RBP eCLIP14.93□□□□□ -0.02
CDCA7-206ENST00000467411 MPHOSPH9Q99550 1183 aa14.92□□□□□ -0.02
CDCA7-206ENST00000467411 ZNF777Q9ULD5 760 aaPredicted RBP14.92□□□□□ -0.02
CDCA7-206ENST00000467411 TRAPPC8Q9Y2L5 1435 aa14.91□□□□□ -0.02
CDCA7-206ENST00000467411 RPRD2Q5VT52 1461 aaKnown RBP14.91□□□□□ -0.02
CDCA7-206ENST00000467411 TSPY4P0CV99 314 aa14.9□□□□□ -0.02
CDCA7-206ENST00000467411 TSPY10P0CW01 314 aa14.9□□□□□ -0.02
CDCA7-206ENST00000467411 ATP7AQ04656 1500 aa14.89□□□□□ -0.03
CDCA7-206ENST00000467411 KIDINS220Q9ULH0 1771 aa14.89□□□□□ -0.03
CDCA7-206ENST00000467411 VWDEQ8N2E2 1590 aa14.89□□□□□ -0.03
CDCA7-206ENST00000467411 NEO1Q92859 1461 aa14.89□□□□□ -0.03
CDCA7-206ENST00000467411 FAM135AQ9P2D6 1515 aa14.88□□□□□ -0.03
CDCA7-206ENST00000467411 ZNF316A6NFI3 1004 aaPredicted RBP14.88□□□□□ -0.03
CDCA7-206ENST00000467411 KCNH8Q96L42 1107 aa14.87□□□□□ -0.03
CDCA7-206ENST00000467411 DIP2BQ9P265 1576 aa14.87□□□□□ -0.03
CDCA7-206ENST00000467411 TEX14Q8IWB6 1497 aa14.87□□□□□ -0.03
CDCA7-206ENST00000467411 ADGRL1O94910 1474 aa14.87□□□□□ -0.03
CDCA7-206ENST00000467411 PPRC1Q5VV67 1664 aaKnown RBP14.86□□□□□ -0.03
CDCA7-206ENST00000467411 SIN3AQ96ST3 1273 aa14.86□□□□□ -0.03
CDCA7-206ENST00000467411 ATP10AO60312 1499 aa14.85□□□□□ -0.03
CDCA7-206ENST00000467411 RICTORQ6R327 1708 aa14.85□□□□□ -0.03
CDCA7-206ENST00000467411 RNF17Q9BXT8 1623 aaKnown RBP14.84□□□□□ -0.03
CDCA7-206ENST00000467411 ZNF518AQ6AHZ1 1483 aa14.84□□□□□ -0.03
CDCA7-206ENST00000467411 CD109Q6YHK3 1445 aa14.84□□□□□ -0.03
CDCA7-206ENST00000467411 PPP1R15AO75807 674 aaPredicted RBP14.84□□□□□ -0.03
CDCA7-206ENST00000467411 MROH1Q8NDA8 1641 aa14.84□□□□□ -0.03
CDCA7-206ENST00000467411 MLH3Q9UHC1 1453 aa14.84□□□□□ -0.03
CDCA7-206ENST00000467411 POGZQ7Z3K3 1410 aa14.83□□□□□ -0.04
CDCA7-206ENST00000467411 NPM1P06748 294 aaKnown RBP eCLIP14.83□□□□□ -0.04
CDCA7-206ENST00000467411 PRDM15P57071 1507 aaPredicted RBP14.83□□□□□ -0.04
CDCA7-206ENST00000467411 HECW2Q9P2P5 1572 aa14.82□□□□□ -0.04
CDCA7-206ENST00000467411 SCAPERQ9BY12 1400 aa14.81□□□□□ -0.04
CDCA7-206ENST00000467411 TET3O43151 1660 aa14.8□□□□□ -0.04
CDCA7-206ENST00000467411 FRMPD1Q5SYB0 1578 aa14.79□□□□□ -0.04
CDCA7-206ENST00000467411 TRIM52Q96A61 297 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms