RNA–Protein interactions for RNA: ENST00000467331.5

APTX-214, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-214ENST00000467331 WASHC2AQ641Q2 1341 aa13.51□□□□□ -0.25
APTX-214ENST00000467331 RPRD2Q5VT52 1461 aaKnown RBP13.5□□□□□ -0.25
APTX-214ENST00000467331 HSPA5P11021 654 aaKnown RBP13.49□□□□□ -0.25
APTX-214ENST00000467331 EIF4G2P78344 907 aaKnown RBP eCLIP13.49□□□□□ -0.25
APTX-214ENST00000467331 TEX14Q8IWB6 1497 aa13.49□□□□□ -0.25
APTX-214ENST00000467331 DAPK1P53355 1430 aa13.46□□□□□ -0.25
APTX-214ENST00000467331 POTEDQ86YR6 584 aa13.46□□□□□ -0.25
APTX-214ENST00000467331 ANKRD30BQ9BXX2 1392 aa13.46□□□□□ -0.25
APTX-214ENST00000467331 CCDC7Q96M83 1385 aa13.46□□□□□ -0.25
APTX-214ENST00000467331 MPHOSPH9Q99550 1183 aa13.46□□□□□ -0.26
APTX-214ENST00000467331 CDK13Q14004 1512 aaKnown RBP13.45□□□□□ -0.26
APTX-214ENST00000467331 FANCIQ9NVI1 1328 aa13.45□□□□□ -0.26
APTX-214ENST00000467331 SPATA31E1Q6ZUB1 1445 aa13.45□□□□□ -0.26
APTX-214ENST00000467331 HNRNPUQ00839 825 aaKnown RBP eCLIP13.45□□□□□ -0.26
APTX-214ENST00000467331 RRP7BPQ9NSQ0 103 aa13.44□□□□□ -0.26
APTX-214ENST00000467331 KIAA0556O60303 1618 aa13.44□□□□□ -0.26
APTX-214ENST00000467331 ADGBQ8N7X0 1667 aa13.42□□□□□ -0.26
APTX-214ENST00000467331 ABCC5O15440 1437 aa13.42□□□□□ -0.26
APTX-214ENST00000467331 L3MBTL2Q969R5 705 aa13.41□□□□□ -0.26
APTX-214ENST00000467331 MBD5Q9P267 1494 aa13.41□□□□□ -0.26
APTX-214ENST00000467331 ZBED9Q6R2W3 1325 aa13.41□□□□□ -0.26
APTX-214ENST00000467331 ITSN2Q9NZM3 1697 aa13.4□□□□□ -0.26
APTX-214ENST00000467331 KIAA0586Q9BVV6 1533 aa13.4□□□□□ -0.26
APTX-214ENST00000467331 RAPGEF6Q8TEU7 1601 aa13.4□□□□□ -0.26
APTX-214ENST00000467331 PRKRIP1Q9H875 184 aaPredicted RBP13.4□□□□□ -0.26
APTX-214ENST00000467331 MRC2Q9UBG0 1479 aa13.4□□□□□ -0.26
APTX-214ENST00000467331 ADCY10Q96PN6 1610 aa13.39□□□□□ -0.27
APTX-214ENST00000467331 CROCC2H7BZ55 1655 aa13.39□□□□□ -0.27
APTX-214ENST00000467331 ADGRL2O95490 1459 aa13.39□□□□□ -0.27
APTX-214ENST00000467331 PPP4R2Q9NY27 417 aa13.39□□□□□ -0.27
APTX-214ENST00000467331 DISP1Q96F81 1524 aa13.38□□□□□ -0.27
APTX-214ENST00000467331 NUP153P49790 1475 aaKnown RBP13.38□□□□□ -0.27
APTX-214ENST00000467331 CDK11AQ9UQ88 783 aaPredicted RBP13.38□□□□□ -0.27
APTX-214ENST00000467331 CHIC2Q9UKJ5 165 aa13.37□□□□□ -0.27
APTX-214ENST00000467331 PZPP20742 1482 aa13.37□□□□□ -0.27
APTX-214ENST00000467331 IFT140Q96RY7 1462 aa13.37□□□□□ -0.27
APTX-214ENST00000467331 KIF14Q15058 1648 aa13.36□□□□□ -0.27
APTX-214ENST00000467331 ARID4BQ4LE39 1312 aaPredicted RBP13.35□□□□□ -0.27
APTX-214ENST00000467331 C11orf95C9JLR9 678 aaPredicted RBP13.34□□□□□ -0.27
APTX-214ENST00000467331 NBPF8Q3BBV2 869 aa13.34□□□□□ -0.27
APTX-214ENST00000467331 KIF7Q2M1P5 1343 aa13.33□□□□□ -0.28
APTX-214ENST00000467331 TROQ12816 1431 aaPredicted RBP13.33□□□□□ -0.28
APTX-214ENST00000467331 CAMSAP2Q08AD1 1489 aa13.32□□□□□ -0.28
APTX-214ENST00000467331 SMG6Q86US8 1419 aaKnown RBP13.32□□□□□ -0.28
APTX-214ENST00000467331 KIAA1107Q9UPP5 1409 aa13.32□□□□□ -0.28
APTX-214ENST00000467331 KDM5CP41229 1560 aa13.31□□□□□ -0.28
APTX-214ENST00000467331 UHRF1BP1Q6BDS2 1440 aa13.31□□□□□ -0.28
APTX-214ENST00000467331 CCDC184Q52MB2 194 aa13.31□□□□□ -0.28
APTX-214ENST00000467331 DHX29Q7Z478 1369 aaKnown RBP13.3□□□□□ -0.28
APTX-214ENST00000467331 MRS2Q9HD23 443 aa13.3□□□□□ -0.28
APTX-214ENST00000467331 ARHGEF12Q9NZN5 1544 aa13.3□□□□□ -0.28
APTX-214ENST00000467331 GRIN2AQ12879 1464 aa13.3□□□□□ -0.28
APTX-214ENST00000467331 KDM5DQ9BY66 1539 aa13.29□□□□□ -0.28
APTX-214ENST00000467331 SHANK2Q9UPX8 1470 aa13.29□□□□□ -0.28
APTX-214ENST00000467331 BCORL1Q5H9F3 1711 aa13.28□□□□□ -0.28
APTX-214ENST00000467331 ROCK2O75116 1388 aaKnown RBP13.28□□□□□ -0.28
APTX-214ENST00000467331 RNF123Q5XPI4 1314 aa13.28□□□□□ -0.28
APTX-214ENST00000467331 GPATCH8Q9UKJ3 1502 aaKnown RBP13.28□□□□□ -0.28
APTX-214ENST00000467331 SLC4A1APQ9BWU0 796 aaKnown RBP13.28□□□□□ -0.28
APTX-214ENST00000467331 RALGAPBQ86X10 1494 aa13.28□□□□□ -0.28
APTX-214ENST00000467331 MYT1LQ9UL68 1186 aa13.27□□□□□ -0.28
APTX-214ENST00000467331 MAGI1Q96QZ7 1491 aaPredicted RBP13.25□□□□□ -0.29
APTX-214ENST00000467331 EIF4G3O43432 1585 aaKnown RBP13.25□□□□□ -0.29
APTX-214ENST00000467331 KTN1Q86UP2 1357 aaKnown RBP13.24□□□□□ -0.29
APTX-214ENST00000467331 USP47Q96K76 1375 aa13.24□□□□□ -0.29
APTX-214ENST00000467331 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
APTX-214ENST00000467331 IRX6P78412 446 aaPredicted RBP13.24□□□□□ -0.29
APTX-214ENST00000467331 FAM9BQ8IZU0 186 aa13.24□□□□□ -0.29
APTX-214ENST00000467331 ANKRD30AQ9BXX3 1397 aa13.24□□□□□ -0.29
APTX-214ENST00000467331 ZNF644Q9H582 1327 aaPredicted RBP13.23□□□□□ -0.29
APTX-214ENST00000467331 E9PCH4 1651 aa13.23□□□□□ -0.29
APTX-214ENST00000467331 CDC42BPAQ5VT25 1732 aa13.22□□□□□ -0.29
APTX-214ENST00000467331 PRG4Q92954 1404 aaPredicted RBP13.22□□□□□ -0.29
APTX-214ENST00000467331 CEP170Q5SW79 1584 aa13.22□□□□□ -0.29
APTX-214ENST00000467331 NUDCQ9Y266 331 aa13.21□□□□□ -0.29
APTX-214ENST00000467331 BCL11AQ9H165 835 aa13.21□□□□□ -0.3
APTX-214ENST00000467331 PTPRGP23470 1445 aa13.2□□□□□ -0.3
APTX-214ENST00000467331 ANKRD50Q9ULJ7 1429 aa13.2□□□□□ -0.3
APTX-214ENST00000467331 ARHGEF5Q12774 1597 aa13.2□□□□□ -0.3
APTX-214ENST00000467331 ABCC10Q5T3U5 1492 aa13.19□□□□□ -0.3
APTX-214ENST00000467331 CFDP1Q9UEE9 299 aaPredicted RBP13.19□□□□□ -0.3
APTX-214ENST00000467331 ABCA8O94911 1581 aa13.19□□□□□ -0.3
APTX-214ENST00000467331 SYNJ2O15056 1496 aa13.18□□□□□ -0.3
APTX-214ENST00000467331 LRPPRCP42704 1394 aaKnown RBP13.18□□□□□ -0.3
APTX-214ENST00000467331 ERICH6Q7L0X2 663 aa13.18□□□□□ -0.3
APTX-214ENST00000467331 NUP160Q12769 1436 aa13.17□□□□□ -0.3
APTX-214ENST00000467331 KIF15Q9NS87 1388 aa13.17□□□□□ -0.3
APTX-214ENST00000467331 CARMIL2Q6F5E8 1435 aa13.17□□□□□ -0.3
APTX-214ENST00000467331 PLB1Q6P1J6 1458 aa13.17□□□□□ -0.3
APTX-214ENST00000467331 BRD4O60885 1362 aaPredicted RBP13.16□□□□□ -0.3
APTX-214ENST00000467331 B4GALNT3Q6L9W6 998 aa13.16□□□□□ -0.3
APTX-214ENST00000467331 LAMC1P11047 1609 aa13.15□□□□□ -0.3
APTX-214ENST00000467331 C9orf84Q5VXU9 1444 aa13.15□□□□□ -0.3
APTX-214ENST00000467331 ZMYM4Q5VZL5 1548 aa13.15□□□□□ -0.3
APTX-214ENST00000467331 PKD2Q13563 968 aa13.15□□□□□ -0.3
APTX-214ENST00000467331 PNISRQ8TF01 805 aaKnown RBP13.14□□□□□ -0.31
APTX-214ENST00000467331 INSRP06213 1382 aa13.14□□□□□ -0.31
APTX-214ENST00000467331 ARID3CA6NKF2 412 aa13.13□□□□□ -0.31
APTX-214ENST00000467331 RALBP1Q15311 655 aa13.12□□□□□ -0.31
APTX-214ENST00000467331 TRPM1Q7Z4N2 1603 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms