RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 ARHGAP5Q13017 1502 aa17.52■□□□□ 0.39
MSH5-212ENST00000467319 ITSN2Q9NZM3 1697 aa17.51■□□□□ 0.39
MSH5-212ENST00000467319 GPATCH8Q9UKJ3 1502 aaKnown RBP17.51■□□□□ 0.39
MSH5-212ENST00000467319 NCOA2Q15596 1464 aa17.5■□□□□ 0.39
MSH5-212ENST00000467319 RICTORQ6R327 1708 aa17.5■□□□□ 0.39
MSH5-212ENST00000467319 AKNAQ7Z591 1439 aa17.5■□□□□ 0.39
MSH5-212ENST00000467319 ABCC1P33527 1531 aa17.49■□□□□ 0.39
MSH5-212ENST00000467319 ADGRL1O94910 1474 aa17.48■□□□□ 0.39
MSH5-212ENST00000467319 ZMYM4Q5VZL5 1548 aa17.47■□□□□ 0.39
MSH5-212ENST00000467319 SAMD9LQ8IVG5 1584 aa17.47■□□□□ 0.39
MSH5-212ENST00000467319 POGZQ7Z3K3 1410 aa17.46■□□□□ 0.39
MSH5-212ENST00000467319 DENND4BO75064 1496 aaPredicted RBP17.45■□□□□ 0.38
MSH5-212ENST00000467319 CCNB3Q8WWL7 1395 aa17.44■□□□□ 0.38
MSH5-212ENST00000467319 KDM5CP41229 1560 aa17.44■□□□□ 0.38
MSH5-212ENST00000467319 KANK4Q5T7N3 995 aaPredicted RBP17.43■□□□□ 0.38
MSH5-212ENST00000467319 EFCAB2Q5VUJ9 269 aa17.42■□□□□ 0.38
MSH5-212ENST00000467319 ARHGEF40Q8TER5 1519 aa17.42■□□□□ 0.38
MSH5-212ENST00000467319 SCAPERQ9BY12 1400 aa17.41■□□□□ 0.38
MSH5-212ENST00000467319 ARHGEF12Q9NZN5 1544 aa17.41■□□□□ 0.38
MSH5-212ENST00000467319 SYCP2Q9BX26 1530 aa17.4■□□□□ 0.38
MSH5-212ENST00000467319 ZNF518AQ6AHZ1 1483 aa17.39■□□□□ 0.37
MSH5-212ENST00000467319 PLEKHH2Q8IVE3 1493 aa17.38■□□□□ 0.37
MSH5-212ENST00000467319 KIAA1107Q9UPP5 1409 aa17.38■□□□□ 0.37
MSH5-212ENST00000467319 RAPGEF3O95398 923 aa17.37■□□□□ 0.37
MSH5-212ENST00000467319 MYOM3Q5VTT5 1437 aa17.37■□□□□ 0.37
MSH5-212ENST00000467319 MAGI2Q86UL8 1455 aa17.36■□□□□ 0.37
MSH5-212ENST00000467319 HECW2Q9P2P5 1572 aa17.36■□□□□ 0.37
MSH5-212ENST00000467319 TRAPPC8Q9Y2L5 1435 aa17.35■□□□□ 0.37
MSH5-212ENST00000467319 CAMSAP2Q08AD1 1489 aa17.35■□□□□ 0.37
MSH5-212ENST00000467319 ZFYVE16Q7Z3T8 1539 aa17.35■□□□□ 0.37
MSH5-212ENST00000467319 APLP2Q06481 763 aa17.34■□□□□ 0.37
MSH5-212ENST00000467319 CFDP1Q9UEE9 299 aaPredicted RBP17.34■□□□□ 0.37
MSH5-212ENST00000467319 MBD5Q9P267 1494 aa17.33■□□□□ 0.37
MSH5-212ENST00000467319 MIA2Q96PC5 1412 aa17.33■□□□□ 0.36
MSH5-212ENST00000467319 INO80Q9ULG1 1556 aaPredicted RBP17.32■□□□□ 0.36
MSH5-212ENST00000467319 MLH3Q9UHC1 1453 aa17.31■□□□□ 0.36
MSH5-212ENST00000467319 YEATS2Q9ULM3 1422 aa17.31■□□□□ 0.36
MSH5-212ENST00000467319 ARHGEF5Q12774 1597 aa17.31■□□□□ 0.36
MSH5-212ENST00000467319 ABCA6Q8N139 1617 aa17.3■□□□□ 0.36
MSH5-212ENST00000467319 DIP2CQ9Y2E4 1556 aa17.3■□□□□ 0.36
MSH5-212ENST00000467319 KIDINS220Q9ULH0 1771 aa17.29■□□□□ 0.36
MSH5-212ENST00000467319 FGD6Q6ZV73 1430 aa17.29■□□□□ 0.36
MSH5-212ENST00000467319 REREQ9P2R6 1566 aa17.28■□□□□ 0.36
MSH5-212ENST00000467319 ZNF644Q9H582 1327 aaPredicted RBP17.28■□□□□ 0.36
MSH5-212ENST00000467319 SIGLEC1Q9BZZ2 1709 aa17.28■□□□□ 0.36
MSH5-212ENST00000467319 TCOF1Q13428 1488 aaKnown RBP17.28■□□□□ 0.36
MSH5-212ENST00000467319 CCDC141Q6ZP82 1450 aa17.27■□□□□ 0.36
MSH5-212ENST00000467319 PTPN23Q9H3S7 1636 aa17.27■□□□□ 0.36
MSH5-212ENST00000467319 ATP7AQ04656 1500 aa17.26■□□□□ 0.35
MSH5-212ENST00000467319 AFAP1Q8N556 730 aa17.26■□□□□ 0.35
MSH5-212ENST00000467319 ZNF777Q9ULD5 760 aaPredicted RBP17.26■□□□□ 0.35
MSH5-212ENST00000467319 CROCC2H7BZ55 1655 aa17.24■□□□□ 0.35
MSH5-212ENST00000467319 C9orf84Q5VXU9 1444 aa17.23■□□□□ 0.35
MSH5-212ENST00000467319 MAST1Q9Y2H9 1570 aa17.23■□□□□ 0.35
MSH5-212ENST00000467319 HNRNPMP52272 730 aaKnown RBP eCLIP17.22■□□□□ 0.35
MSH5-212ENST00000467319 ATP10AO60312 1499 aa17.22■□□□□ 0.35
MSH5-212ENST00000467319 PLXNC1O60486 1568 aa17.22■□□□□ 0.35
MSH5-212ENST00000467319 DNMT1P26358 1616 aaKnown RBP17.21■□□□□ 0.35
MSH5-212ENST00000467319 SHANK2Q9UPX8 1470 aa17.2■□□□□ 0.34
MSH5-212ENST00000467319 RTEL1-TNFRSF6BF6WH68 1400 aa17.2■□□□□ 0.34
MSH5-212ENST00000467319 BCORL1Q5H9F3 1711 aa17.19■□□□□ 0.34
MSH5-212ENST00000467319 ADGBQ8N7X0 1667 aa17.19■□□□□ 0.34
MSH5-212ENST00000467319 AGLP35573 1532 aa17.18■□□□□ 0.34
MSH5-212ENST00000467319 SPAG9O60271 1321 aaKnown RBP17.18■□□□□ 0.34
MSH5-212ENST00000467319 ADAMTSL3P82987 1691 aa17.17■□□□□ 0.34
MSH5-212ENST00000467319 ABCC5O15440 1437 aa17.15■□□□□ 0.34
MSH5-212ENST00000467319 DAPK1P53355 1430 aa17.14■□□□□ 0.33
MSH5-212ENST00000467319 RSPH4AQ5TD94 716 aa17.14■□□□□ 0.33
MSH5-212ENST00000467319 A2MP01023 1474 aa17.12■□□□□ 0.33
MSH5-212ENST00000467319 MADDQ8WXG6 1647 aa17.12■□□□□ 0.33
MSH5-212ENST00000467319 KDM4FA0A1W2PPD8 638 aa17.12■□□□□ 0.33
MSH5-212ENST00000467319 RRBP1Q9P2E9 1410 aaKnown RBP17.12■□□□□ 0.33
MSH5-212ENST00000467319 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.1■□□□□ 0.33
MSH5-212ENST00000467319 ADGRL2O95490 1459 aa17.09■□□□□ 0.33
MSH5-212ENST00000467319 PPARGC1BQ86YN6 1023 aaKnown RBP17.08■□□□□ 0.32
MSH5-212ENST00000467319 FER1L4A9Z1Z3 1794 aa17.07■□□□□ 0.32
MSH5-212ENST00000467319 EIF2AK4Q9P2K8 1649 aaKnown RBP17.07■□□□□ 0.32
MSH5-212ENST00000467319 MYT1LQ9UL68 1186 aa17.05■□□□□ 0.32
MSH5-212ENST00000467319 DUOX2Q9NRD8 1548 aa17.05■□□□□ 0.32
MSH5-212ENST00000467319 DHX29Q7Z478 1369 aaKnown RBP17.04■□□□□ 0.32
MSH5-212ENST00000467319 RIMS1Q86UR5 1692 aaKnown RBP17.04■□□□□ 0.32
MSH5-212ENST00000467319 RNF17Q9BXT8 1623 aaKnown RBP17.04■□□□□ 0.32
MSH5-212ENST00000467319 ARID4BQ4LE39 1312 aaPredicted RBP17.04■□□□□ 0.32
MSH5-212ENST00000467319 PTPRKQ15262 1439 aa17.04■□□□□ 0.32
MSH5-212ENST00000467319 TSPY4P0CV99 314 aa17.03■□□□□ 0.32
MSH5-212ENST00000467319 TSPY10P0CW01 314 aa17.03■□□□□ 0.32
MSH5-212ENST00000467319 FAM50AQ14320 339 aaKnown RBP17.02■□□□□ 0.32
MSH5-212ENST00000467319 KIF15Q9NS87 1388 aa17.02■□□□□ 0.31
MSH5-212ENST00000467319 FAM135AQ9P2D6 1515 aa17.01■□□□□ 0.31
MSH5-212ENST00000467319 PTPRMP28827 1452 aa17.01■□□□□ 0.31
MSH5-212ENST00000467319 MROH1Q8NDA8 1641 aa17.01■□□□□ 0.31
MSH5-212ENST00000467319 NCOA1Q15788 1441 aa17.01■□□□□ 0.31
MSH5-212ENST00000467319 ERBINQ96RT1 1412 aa17.01■□□□□ 0.31
MSH5-212ENST00000467319 MROH2AA6NES4 1674 aa16.99■□□□□ 0.31
MSH5-212ENST00000467319 ANKRD30AQ9BXX3 1397 aa16.99■□□□□ 0.31
MSH5-212ENST00000467319 DEPDC5O75140 1603 aa16.99■□□□□ 0.31
MSH5-212ENST00000467319 ROCK1Q13464 1354 aa16.98■□□□□ 0.31
MSH5-212ENST00000467319 PRDM15P57071 1507 aaPredicted RBP16.97■□□□□ 0.31
MSH5-212ENST00000467319 CNTLNQ9NXG0 1405 aa16.96■□□□□ 0.3
MSH5-212ENST00000467319 KDM5DQ9BY66 1539 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms