RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 PCF11O94913 1555 aaKnown RBP10.72□□□□□ -0.69
UBXN4-205ENST00000467065 FRMPD1Q5SYB0 1578 aa10.72□□□□□ -0.69
UBXN4-205ENST00000467065 CFAP74Q9C0B2 1584 aa10.72□□□□□ -0.69
UBXN4-205ENST00000467065 MYO5CQ9NQX4 1742 aa10.72□□□□□ -0.69
UBXN4-205ENST00000467065 KDM4FA0A1W2PPD8 638 aa10.71□□□□□ -0.69
UBXN4-205ENST00000467065 FMN1Q68DA7 1419 aa10.71□□□□□ -0.69
UBXN4-205ENST00000467065 RICTORQ6R327 1708 aa10.71□□□□□ -0.69
UBXN4-205ENST00000467065 ARAP3Q8WWN8 1544 aa10.71□□□□□ -0.69
UBXN4-205ENST00000467065 KIF14Q15058 1648 aa10.7□□□□□ -0.7
UBXN4-205ENST00000467065 NEO1Q92859 1461 aa10.68□□□□□ -0.7
UBXN4-205ENST00000467065 PLEKHD1A6NEE1 506 aa10.67□□□□□ -0.7
UBXN4-205ENST00000467065 ATP1B4Q9UN42 357 aaPredicted RBP10.67□□□□□ -0.7
UBXN4-205ENST00000467065 FANCAO15360 1455 aa10.66□□□□□ -0.7
UBXN4-205ENST00000467065 ARHGEF40Q8TER5 1519 aa10.64□□□□□ -0.71
UBXN4-205ENST00000467065 KCNA4P22459 653 aa10.64□□□□□ -0.71
UBXN4-205ENST00000467065 ZNF219Q9P2Y4 722 aaPredicted RBP10.64□□□□□ -0.71
UBXN4-205ENST00000467065 CDC42BPBQ9Y5S2 1711 aa10.64□□□□□ -0.71
UBXN4-205ENST00000467065 PHLDB1Q86UU1 1377 aa10.64□□□□□ -0.71
UBXN4-205ENST00000467065 RAPGEF3O95398 923 aa10.63□□□□□ -0.71
UBXN4-205ENST00000467065 AKNAQ7Z591 1439 aa10.63□□□□□ -0.71
UBXN4-205ENST00000467065 BCORL1Q5H9F3 1711 aa10.62□□□□□ -0.71
UBXN4-205ENST00000467065 CDC42BPAQ5VT25 1732 aa10.62□□□□□ -0.71
UBXN4-205ENST00000467065 SIGLEC1Q9BZZ2 1709 aa10.62□□□□□ -0.71
UBXN4-205ENST00000467065 CLIP1P30622 1438 aa10.62□□□□□ -0.71
UBXN4-205ENST00000467065 CASKIN1Q8WXD9 1431 aa10.62□□□□□ -0.71
UBXN4-205ENST00000467065 ABCB7O75027 752 aa10.62□□□□□ -0.71
UBXN4-205ENST00000467065 APLP2Q06481 763 aa10.62□□□□□ -0.71
UBXN4-205ENST00000467065 PREX2Q70Z35 1606 aa10.62□□□□□ -0.71
UBXN4-205ENST00000467065 DENND4BO75064 1496 aaPredicted RBP10.61□□□□□ -0.71
UBXN4-205ENST00000467065 CCDC18Q5T9S5 1454 aa10.61□□□□□ -0.71
UBXN4-205ENST00000467065 FYCO1Q9BQS8 1478 aa10.61□□□□□ -0.71
UBXN4-205ENST00000467065 TROQ12816 1431 aaPredicted RBP10.61□□□□□ -0.71
UBXN4-205ENST00000467065 ADAMTSL3P82987 1691 aa10.61□□□□□ -0.71
UBXN4-205ENST00000467065 ZMYM4Q5VZL5 1548 aa10.61□□□□□ -0.71
UBXN4-205ENST00000467065 PLCH2O75038 1416 aa10.59□□□□□ -0.71
UBXN4-205ENST00000467065 ARHGAP5Q13017 1502 aa10.59□□□□□ -0.71
UBXN4-205ENST00000467065 MADDQ8WXG6 1647 aa10.59□□□□□ -0.71
UBXN4-205ENST00000467065 ZFYVE16Q7Z3T8 1539 aa10.58□□□□□ -0.72
UBXN4-205ENST00000467065 RIMS1Q86UR5 1692 aaKnown RBP10.58□□□□□ -0.72
UBXN4-205ENST00000467065 ITSN2Q9NZM3 1697 aa10.58□□□□□ -0.72
UBXN4-205ENST00000467065 HECW2Q9P2P5 1572 aa10.57□□□□□ -0.72
UBXN4-205ENST00000467065 CDK11AQ9UQ88 783 aaPredicted RBP10.57□□□□□ -0.72
UBXN4-205ENST00000467065 POGZQ7Z3K3 1410 aa10.57□□□□□ -0.72
UBXN4-205ENST00000467065 FER1L4A9Z1Z3 1794 aa10.56□□□□□ -0.72
UBXN4-205ENST00000467065 SCAPERQ9BY12 1400 aa10.56□□□□□ -0.72
UBXN4-205ENST00000467065 YEATS2Q9ULM3 1422 aa10.56□□□□□ -0.72
UBXN4-205ENST00000467065 CEP162Q5TB80 1403 aa10.55□□□□□ -0.72
UBXN4-205ENST00000467065 ABCC1P33527 1531 aa10.54□□□□□ -0.72
UBXN4-205ENST00000467065 KDM5CP41229 1560 aa10.54□□□□□ -0.72
UBXN4-205ENST00000467065 ABCA6Q8N139 1617 aa10.53□□□□□ -0.72
UBXN4-205ENST00000467065 SAMD9LQ8IVG5 1584 aa10.52□□□□□ -0.72
UBXN4-205ENST00000467065 EFCAB2Q5VUJ9 269 aa10.52□□□□□ -0.73
UBXN4-205ENST00000467065 ZNF518AQ6AHZ1 1483 aa10.52□□□□□ -0.73
UBXN4-205ENST00000467065 MAGI2Q86UL8 1455 aa10.52□□□□□ -0.73
UBXN4-205ENST00000467065 ARID4BQ4LE39 1312 aaPredicted RBP10.52□□□□□ -0.73
UBXN4-205ENST00000467065 PTPRMP28827 1452 aa10.51□□□□□ -0.73
UBXN4-205ENST00000467065 DIP2CQ9Y2E4 1556 aa10.51□□□□□ -0.73
UBXN4-205ENST00000467065 KIDINS220Q9ULH0 1771 aa10.5□□□□□ -0.73
UBXN4-205ENST00000467065 ARHGEF12Q9NZN5 1544 aa10.5□□□□□ -0.73
UBXN4-205ENST00000467065 EHBP1L1Q8N3D4 1523 aa10.49□□□□□ -0.73
UBXN4-205ENST00000467065 SYCP2Q9BX26 1530 aa10.49□□□□□ -0.73
UBXN4-205ENST00000467065 TIAM1Q13009 1591 aa10.49□□□□□ -0.73
UBXN4-205ENST00000467065 SAMD1Q6SPF0 538 aaPredicted RBP10.49□□□□□ -0.73
UBXN4-205ENST00000467065 C9orf84Q5VXU9 1444 aa10.49□□□□□ -0.73
UBXN4-205ENST00000467065 ATP10AO60312 1499 aa10.48□□□□□ -0.73
UBXN4-205ENST00000467065 SUPT6HQ7KZ85 1726 aaKnown RBP10.47□□□□□ -0.73
UBXN4-205ENST00000467065 MTUS2Q5JR59 1369 aa10.47□□□□□ -0.73
UBXN4-205ENST00000467065 TRAPPC8Q9Y2L5 1435 aa10.47□□□□□ -0.73
UBXN4-205ENST00000467065 GPATCH8Q9UKJ3 1502 aaKnown RBP10.47□□□□□ -0.73
UBXN4-205ENST00000467065 AFAP1Q8N556 730 aa10.46□□□□□ -0.73
UBXN4-205ENST00000467065 REREQ9P2R6 1566 aa10.46□□□□□ -0.74
UBXN4-205ENST00000467065 LOC105371045A0A1W2PR82 267 aa10.45□□□□□ -0.74
UBXN4-205ENST00000467065 MLECQ14165 292 aa10.45□□□□□ -0.74
UBXN4-205ENST00000467065 INO80Q9ULG1 1556 aaPredicted RBP10.44□□□□□ -0.74
UBXN4-205ENST00000467065 MLH3Q9UHC1 1453 aa10.44□□□□□ -0.74
UBXN4-205ENST00000467065 MYT1LQ9UL68 1186 aa10.44□□□□□ -0.74
UBXN4-205ENST00000467065 ZNF777Q9ULD5 760 aaPredicted RBP10.44□□□□□ -0.74
UBXN4-205ENST00000467065 CCNB3Q8WWL7 1395 aa10.43□□□□□ -0.74
UBXN4-205ENST00000467065 RBM42Q9BTD8 480 aaKnown RBP10.43□□□□□ -0.74
UBXN4-205ENST00000467065 C3P01024 1663 aa10.43□□□□□ -0.74
UBXN4-205ENST00000467065 ATP7AQ04656 1500 aa10.43□□□□□ -0.74
UBXN4-205ENST00000467065 PREX1Q8TCU6 1659 aa10.42□□□□□ -0.74
UBXN4-205ENST00000467065 LMTK3Q96Q04 1460 aa10.42□□□□□ -0.74
UBXN4-205ENST00000467065 VPS8Q8N3P4 1428 aa10.41□□□□□ -0.74
UBXN4-205ENST00000467065 ADGBQ8N7X0 1667 aa10.41□□□□□ -0.74
UBXN4-205ENST00000467065 PLEKHH2Q8IVE3 1493 aa10.41□□□□□ -0.74
UBXN4-205ENST00000467065 NCOA2Q15596 1464 aa10.4□□□□□ -0.74
UBXN4-205ENST00000467065 AGLP35573 1532 aa10.39□□□□□ -0.75
UBXN4-205ENST00000467065 HNRNPMP52272 730 aaKnown RBP eCLIP10.39□□□□□ -0.75
UBXN4-205ENST00000467065 CFDP1Q9UEE9 299 aaPredicted RBP10.39□□□□□ -0.75
UBXN4-205ENST00000467065 PLXNC1O60486 1568 aa10.39□□□□□ -0.75
UBXN4-205ENST00000467065 CLTCQ00610 1675 aaKnown RBP10.38□□□□□ -0.75
UBXN4-205ENST00000467065 KIAA1107Q9UPP5 1409 aa10.38□□□□□ -0.75
UBXN4-205ENST00000467065 MROH2AA6NES4 1674 aa10.38□□□□□ -0.75
UBXN4-205ENST00000467065 CAMSAP2Q08AD1 1489 aa10.37□□□□□ -0.75
UBXN4-205ENST00000467065 SETD1BQ9UPS6 1966 aaKnown RBP10.37□□□□□ -0.75
UBXN4-205ENST00000467065 LRRC9Q6ZRR7 1453 aa10.36□□□□□ -0.75
UBXN4-205ENST00000467065 SPAG9O60271 1321 aaKnown RBP10.36□□□□□ -0.75
UBXN4-205ENST00000467065 ZNF644Q9H582 1327 aaPredicted RBP10.36□□□□□ -0.75
UBXN4-205ENST00000467065 CHRDL2Q6WN34 429 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms