RNA–Protein interactions for RNA: ENST00000467061.1

TMEM41A-204, Transcript of transmembrane protein 41A, humanhuman

TSL 2

Gene TMEM41A, Length 4,921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-204ENST00000467061 HAP1P54257 671 aaPredicted RBP20.22■□□□□ 0.83
TMEM41A-204ENST00000467061 FOXD1Q16676 465 aa20.21■□□□□ 0.83
TMEM41A-204ENST00000467061 MORC1Q86VD1 984 aa20.21■□□□□ 0.83
TMEM41A-204ENST00000467061 PDE3BQ13370 1112 aa20.2■□□□□ 0.82
TMEM41A-204ENST00000467061 CFAP44Q96MT7 982 aa20.2■□□□□ 0.82
TMEM41A-204ENST00000467061 RCAN3Q9UKA8 241 aa20.2■□□□□ 0.82
TMEM41A-204ENST00000467061 HDGFP51858 240 aaKnown RBP20.19■□□□□ 0.82
TMEM41A-204ENST00000467061 U2SURPO15042 1029 aaKnown RBP20.19■□□□□ 0.82
TMEM41A-204ENST00000467061 C14orf37Q86TY3 774 aa20.19■□□□□ 0.82
TMEM41A-204ENST00000467061 TCERG1O14776 1098 aaKnown RBP20.19■□□□□ 0.82
TMEM41A-204ENST00000467061 EIF3AQ14152 1382 aaKnown RBP20.18■□□□□ 0.82
TMEM41A-204ENST00000467061 PHLDB1Q86UU1 1377 aa20.16■□□□□ 0.82
TMEM41A-204ENST00000467061 NLRP13Q86W25 1043 aa20.16■□□□□ 0.82
TMEM41A-204ENST00000467061 LAS1LQ9Y4W2 734 aaKnown RBP20.16■□□□□ 0.82
TMEM41A-204ENST00000467061 TNNT2P45379 298 aaPredicted RBP20.16■□□□□ 0.82
TMEM41A-204ENST00000467061 FANCD2Q9BXW9 1451 aa20.12■□□□□ 0.81
TMEM41A-204ENST00000467061 SENP3Q9H4L4 574 aaPredicted RBP20.12■□□□□ 0.81
TMEM41A-204ENST00000467061 IPO8O15397 1037 aaKnown RBP20.1■□□□□ 0.81
TMEM41A-204ENST00000467061 SRPK2P78362 688 aaKnown RBP20.1■□□□□ 0.81
TMEM41A-204ENST00000467061 TSHZ2Q9NRE2 1034 aa20.09■□□□□ 0.81
TMEM41A-204ENST00000467061 KIF15Q9NS87 1388 aa20.09■□□□□ 0.81
TMEM41A-204ENST00000467061 HSP90AB1P08238 724 aaKnown RBP20.08■□□□□ 0.81
TMEM41A-204ENST00000467061 CALD1Q05682 793 aaKnown RBP20.08■□□□□ 0.81
TMEM41A-204ENST00000467061 HSCBQ8IWL3 235 aa20.08■□□□□ 0.81
TMEM41A-204ENST00000467061 ZBTB7CA1YPR0 619 aa20.08■□□□□ 0.8
TMEM41A-204ENST00000467061 HDGFL2Q7Z4V5 671 aaPredicted RBP20.07■□□□□ 0.8
TMEM41A-204ENST00000467061 IGF1RP08069 1367 aa20.07■□□□□ 0.8
TMEM41A-204ENST00000467061 KIF21BO75037 1637 aa20.04■□□□□ 0.8
TMEM41A-204ENST00000467061 PTMAP06454 111 aaKnown RBP20.04■□□□□ 0.8
TMEM41A-204ENST00000467061 L1TD1Q5T7N2 865 aaKnown RBP20.04■□□□□ 0.8
TMEM41A-204ENST00000467061 RWDD1Q9H446 243 aaPredicted RBP20.03■□□□□ 0.8
TMEM41A-204ENST00000467061 MYBBP1AQ9BQG0 1328 aaKnown RBP20.03■□□□□ 0.8
TMEM41A-204ENST00000467061 GOLGA2Q08379 1002 aa20.03■□□□□ 0.8
TMEM41A-204ENST00000467061 JPH4Q96JJ6 628 aa20.03■□□□□ 0.8
TMEM41A-204ENST00000467061 GGT6Q6P531 493 aa20.02■□□□□ 0.79
TMEM41A-204ENST00000467061 CUX1P39880 1505 aa20.01■□□□□ 0.79
TMEM41A-204ENST00000467061 PRKRIP1Q9H875 184 aaPredicted RBP20.01■□□□□ 0.79
TMEM41A-204ENST00000467061 ERICH3Q5RHP9 1530 aa20.01■□□□□ 0.79
TMEM41A-204ENST00000467061 ZRSR1Q15695 479 aaKnown RBP20.01■□□□□ 0.79
TMEM41A-204ENST00000467061 FGD5Q6ZNL6 1462 aa20■□□□□ 0.79
TMEM41A-204ENST00000467061 NCAPD3P42695 1498 aa20■□□□□ 0.79
TMEM41A-204ENST00000467061 HNRNPMP52272 730 aaKnown RBP eCLIP20■□□□□ 0.79
TMEM41A-204ENST00000467061 PMFBP1Q8TBY8 1022 aa20■□□□□ 0.79
TMEM41A-204ENST00000467061 ZBED9Q6R2W3 1325 aa20■□□□□ 0.79
TMEM41A-204ENST00000467061 CCDC144AA2RUR9 1427 aa19.99■□□□□ 0.79
TMEM41A-204ENST00000467061 SPAG9O60271 1321 aaKnown RBP19.99■□□□□ 0.79
TMEM41A-204ENST00000467061 FGD6Q6ZV73 1430 aa19.98■□□□□ 0.79
TMEM41A-204ENST00000467061 U2AF1L5P0DN76 240 aaPredicted RBP19.98■□□□□ 0.79
TMEM41A-204ENST00000467061 DEKP35659 375 aaKnown RBP19.98■□□□□ 0.79
TMEM41A-204ENST00000467061 U2AF1Q01081 240 aaKnown RBP eCLIP19.98■□□□□ 0.79
TMEM41A-204ENST00000467061 PTMSP20962 102 aa19.98■□□□□ 0.79
TMEM41A-204ENST00000467061 MYOM3Q5VTT5 1437 aa19.97■□□□□ 0.79
TMEM41A-204ENST00000467061 MCCP23508 829 aa19.97■□□□□ 0.79
TMEM41A-204ENST00000467061 UACAQ9BZF9 1416 aa19.96■□□□□ 0.79
TMEM41A-204ENST00000467061 IPO9Q96P70 1041 aaKnown RBP19.95■□□□□ 0.78
TMEM41A-204ENST00000467061 KIF3BO15066 747 aa19.95■□□□□ 0.78
TMEM41A-204ENST00000467061 CHMP4AQ9BY43 222 aa19.94■□□□□ 0.78
TMEM41A-204ENST00000467061 LRRC9Q6ZRR7 1453 aa19.94■□□□□ 0.78
TMEM41A-204ENST00000467061 GAPVD1Q14C86 1478 aa19.94■□□□□ 0.78
TMEM41A-204ENST00000467061 TERF2IPQ9NYB0 399 aa19.93■□□□□ 0.78
TMEM41A-204ENST00000467061 OS9Q13438 667 aaPredicted RBP19.93■□□□□ 0.78
TMEM41A-204ENST00000467061 ST20-MTHFSA0A0A6YYL1 179 aa19.93■□□□□ 0.78
TMEM41A-204ENST00000467061 USP47Q96K76 1375 aa19.92■□□□□ 0.78
TMEM41A-204ENST00000467061 RTF1Q92541 710 aaKnown RBP19.92■□□□□ 0.78
TMEM41A-204ENST00000467061 CASKIN1Q8WXD9 1431 aa19.9■□□□□ 0.78
TMEM41A-204ENST00000467061 SAFB2Q14151 953 aaKnown RBP eCLIP19.9■□□□□ 0.78
TMEM41A-204ENST00000467061 NGEFQ8N5V2 710 aa19.9■□□□□ 0.78
TMEM41A-204ENST00000467061 RRBP1Q9P2E9 1410 aaKnown RBP19.89■□□□□ 0.78
TMEM41A-204ENST00000467061 DNTTIP2Q5QJE6 756 aaKnown RBP19.89■□□□□ 0.77
TMEM41A-204ENST00000467061 CENPJQ9HC77 1338 aaPredicted RBP19.88■□□□□ 0.77
TMEM41A-204ENST00000467061 STK26Q9P289 416 aa19.88■□□□□ 0.77
TMEM41A-204ENST00000467061 STAC3Q96MF2 364 aa19.88■□□□□ 0.77
TMEM41A-204ENST00000467061 GBP4Q96PP9 640 aa19.88■□□□□ 0.77
TMEM41A-204ENST00000467061 KCNJ4P48050 445 aa19.87■□□□□ 0.77
TMEM41A-204ENST00000467061 PLEKHG5O94827 1062 aa19.87■□□□□ 0.77
TMEM41A-204ENST00000467061 PTPRGP23470 1445 aa19.86■□□□□ 0.77
TMEM41A-204ENST00000467061 ITPRIPQ8IWB1 547 aa19.86■□□□□ 0.77
TMEM41A-204ENST00000467061 FYCO1Q9BQS8 1478 aa19.86■□□□□ 0.77
TMEM41A-204ENST00000467061 NAP1L5Q96NT1 182 aaPredicted RBP19.85■□□□□ 0.77
TMEM41A-204ENST00000467061 A0A0G2JS52 829 aa19.84■□□□□ 0.77
TMEM41A-204ENST00000467061 LMOD3Q0VAK6 560 aa19.84■□□□□ 0.77
TMEM41A-204ENST00000467061 PANK3Q9H999 370 aa19.84■□□□□ 0.77
TMEM41A-204ENST00000467061 FGD1P98174 961 aa19.83■□□□□ 0.77
TMEM41A-204ENST00000467061 CDK11BP21127 795 aaKnown RBP19.83■□□□□ 0.77
TMEM41A-204ENST00000467061 LMOD2Q6P5Q4 547 aa19.83■□□□□ 0.77
TMEM41A-204ENST00000467061 CENPQQ7L2Z9 268 aaPredicted RBP19.83■□□□□ 0.77
TMEM41A-204ENST00000467061 GOLGA6L6A8MZA4 724 aa19.83■□□□□ 0.76
TMEM41A-204ENST00000467061 SMC4Q9NTJ3 1288 aa19.83■□□□□ 0.76
TMEM41A-204ENST00000467061 USP35Q9P2H5 1018 aa19.82■□□□□ 0.76
TMEM41A-204ENST00000467061 NRDCO43847 1150 aa19.82■□□□□ 0.76
TMEM41A-204ENST00000467061 CCDC7Q96M83 1385 aa19.8■□□□□ 0.76
TMEM41A-204ENST00000467061 WASHC2CQ9Y4E1 1318 aa19.8■□□□□ 0.76
TMEM41A-204ENST00000467061 RRP1P56182 461 aaKnown RBP19.8■□□□□ 0.76
TMEM41A-204ENST00000467061 GOLGA6L4A6NEF3 574 aa19.79■□□□□ 0.76
TMEM41A-204ENST00000467061 E9PSI1 815 aa19.79■□□□□ 0.76
TMEM41A-204ENST00000467061 MIA2Q96PC5 1412 aa19.79■□□□□ 0.76
TMEM41A-204ENST00000467061 MLECQ14165 292 aa19.79■□□□□ 0.76
TMEM41A-204ENST00000467061 HDAC5Q9UQL6 1122 aa19.79■□□□□ 0.76
TMEM41A-204ENST00000467061 CFTRP13569 1480 aa19.78■□□□□ 0.76
TMEM41A-204ENST00000467061 PRXQ9BXM0 1461 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms