RNA–Protein interactions for RNA: ENST00000466454.1

CLCA3P-202, Transcript of chloride channel accessory 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CLCA3P, Length 3,412 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-202ENST00000466454 BCCIPQ9P287 314 aaKnown RBP eCLIP6.42□□□□□ -1.38
CLCA3P-202ENST00000466454 TRAIPQ9BWF2 469 aa6.41□□□□□ -1.38
CLCA3P-202ENST00000466454 AEBP1Q8IUX7 1158 aa6.41□□□□□ -1.38
CLCA3P-202ENST00000466454 CEP164Q9UPV0 1460 aa6.41□□□□□ -1.38
CLCA3P-202ENST00000466454 TOP2BQ02880 1626 aa6.41□□□□□ -1.38
CLCA3P-202ENST00000466454 USP35Q9P2H5 1018 aa6.41□□□□□ -1.38
CLCA3P-202ENST00000466454 ERICH3Q5RHP9 1530 aa6.41□□□□□ -1.38
CLCA3P-202ENST00000466454 SYNJ1O43426 1573 aa6.4□□□□□ -1.38
CLCA3P-202ENST00000466454 SPDYE2BA6NHP3 402 aa6.4□□□□□ -1.39
CLCA3P-202ENST00000466454 SPDYE6P0CI01 402 aa6.4□□□□□ -1.39
CLCA3P-202ENST00000466454 SPDYE2Q495Y8 402 aa6.4□□□□□ -1.39
CLCA3P-202ENST00000466454 ZNF592Q92610 1267 aa6.4□□□□□ -1.39
CLCA3P-202ENST00000466454 PKNOX2Q96KN3 472 aa6.4□□□□□ -1.39
CLCA3P-202ENST00000466454 CERS3Q8IU89 383 aa6.4□□□□□ -1.39
CLCA3P-202ENST00000466454 PRDM2Q13029 1718 aa6.39□□□□□ -1.39
CLCA3P-202ENST00000466454 ATAD2BQ9ULI0 1458 aa6.39□□□□□ -1.39
CLCA3P-202ENST00000466454 HMGXB3Q12766 1538 aa6.39□□□□□ -1.39
CLCA3P-202ENST00000466454 SOGA1O94964 1423 aa6.39□□□□□ -1.39
CLCA3P-202ENST00000466454 TMCO4Q5TGY1 634 aa6.38□□□□□ -1.39
CLCA3P-202ENST00000466454 RSPH4AQ5TD94 716 aa6.38□□□□□ -1.39
CLCA3P-202ENST00000466454 GPBP1L1Q9HC44 474 aaPredicted RBP6.38□□□□□ -1.39
CLCA3P-202ENST00000466454 CLEC11AQ9Y240 323 aa6.37□□□□□ -1.39
CLCA3P-202ENST00000466454 GZF1Q9H116 711 aaPredicted RBP6.37□□□□□ -1.39
CLCA3P-202ENST00000466454 ZBTB12Q9Y330 459 aaPredicted RBP6.37□□□□□ -1.39
CLCA3P-202ENST00000466454 CCDC136Q96JN2 1154 aa6.36□□□□□ -1.39
CLCA3P-202ENST00000466454 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.36□□□□□ -1.39
CLCA3P-202ENST00000466454 TICAM2Q86XR7 235 aa6.35□□□□□ -1.39
CLCA3P-202ENST00000466454 RUSC2Q8N2Y8 1516 aa6.35□□□□□ -1.39
CLCA3P-202ENST00000466454 IL27Q8NEV9 243 aa6.34□□□□□ -1.39
CLCA3P-202ENST00000466454 KCNV2Q8TDN2 545 aa6.34□□□□□ -1.39
CLCA3P-202ENST00000466454 CUX2O14529 1486 aa6.34□□□□□ -1.39
CLCA3P-202ENST00000466454 VPS8Q8N3P4 1428 aa6.34□□□□□ -1.39
CLCA3P-202ENST00000466454 IRF5Q13568 498 aa6.34□□□□□ -1.39
CLCA3P-202ENST00000466454 E9PSI1 815 aa6.34□□□□□ -1.4
CLCA3P-202ENST00000466454 RASEFQ8IZ41 740 aa6.34□□□□□ -1.4
CLCA3P-202ENST00000466454 PRXQ9BXM0 1461 aa6.33□□□□□ -1.4
CLCA3P-202ENST00000466454 GTPBP6O43824 516 aaPredicted RBP6.33□□□□□ -1.4
CLCA3P-202ENST00000466454 PYGBP11216 843 aa6.33□□□□□ -1.4
CLCA3P-202ENST00000466454 CLSPNQ9HAW4 1339 aa6.33□□□□□ -1.4
CLCA3P-202ENST00000466454 STK25O00506 426 aa6.33□□□□□ -1.4
CLCA3P-202ENST00000466454 PRDM16Q9HAZ2 1276 aa6.32□□□□□ -1.4
CLCA3P-202ENST00000466454 NCAPD3P42695 1498 aa6.32□□□□□ -1.4
CLCA3P-202ENST00000466454 MAP3K1Q13233 1512 aa6.32□□□□□ -1.4
CLCA3P-202ENST00000466454 NUBP1P53384 320 aa6.32□□□□□ -1.4
CLCA3P-202ENST00000466454 STAG3Q9UJ98 1225 aa6.32□□□□□ -1.4
CLCA3P-202ENST00000466454 HS6ST3Q8IZP7 471 aa6.31□□□□□ -1.4
CLCA3P-202ENST00000466454 PPM1GO15355 546 aaPredicted RBP6.31□□□□□ -1.4
CLCA3P-202ENST00000466454 DCAF8Q5TAQ9 597 aa6.31□□□□□ -1.4
CLCA3P-202ENST00000466454 ZNF316A6NFI3 1004 aaPredicted RBP6.31□□□□□ -1.4
CLCA3P-202ENST00000466454 CCDC125Q86Z20 511 aa6.3□□□□□ -1.4
CLCA3P-202ENST00000466454 CLIP1P30622 1438 aa6.3□□□□□ -1.4
CLCA3P-202ENST00000466454 CADPSQ9ULU8 1353 aa6.3□□□□□ -1.4
CLCA3P-202ENST00000466454 MNX1P50219 401 aaPredicted RBP6.29□□□□□ -1.4
CLCA3P-202ENST00000466454 CACNB1Q02641 598 aaPredicted RBP6.29□□□□□ -1.4
CLCA3P-202ENST00000466454 CHADLQ6NUI6 762 aa6.29□□□□□ -1.4
CLCA3P-202ENST00000466454 ACIN1Q9UKV3 1341 aaKnown RBP6.29□□□□□ -1.4
CLCA3P-202ENST00000466454 CC2D2BQ6DHV5 1058 aa6.29□□□□□ -1.4
CLCA3P-202ENST00000466454 CLUAP1Q96AJ1 413 aa6.28□□□□□ -1.4
CLCA3P-202ENST00000466454 RETREG2Q8NC44 543 aa6.28□□□□□ -1.4
CLCA3P-202ENST00000466454 RRBP1Q9P2E9 1410 aaKnown RBP6.27□□□□□ -1.41
CLCA3P-202ENST00000466454 ZMYND10O75800 440 aa6.27□□□□□ -1.41
CLCA3P-202ENST00000466454 CADPS2Q86UW7 1296 aa6.27□□□□□ -1.41
CLCA3P-202ENST00000466454 PSMD1Q99460 953 aa6.27□□□□□ -1.41
CLCA3P-202ENST00000466454 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.27□□□□□ -1.41
CLCA3P-202ENST00000466454 A0A0U1RQG5 324 aaPredicted RBP6.27□□□□□ -1.41
CLCA3P-202ENST00000466454 ONECUT3O60422 494 aaPredicted RBP6.27□□□□□ -1.41
CLCA3P-202ENST00000466454 KDM4AO75164 1064 aa6.27□□□□□ -1.41
CLCA3P-202ENST00000466454 CFTRP13569 1480 aa6.27□□□□□ -1.41
CLCA3P-202ENST00000466454 RAPGEF2Q9Y4G8 1499 aa6.27□□□□□ -1.41
CLCA3P-202ENST00000466454 CREBZFQ9NS37 354 aa6.26□□□□□ -1.41
CLCA3P-202ENST00000466454 IGSF5Q9NSI5 407 aa6.26□□□□□ -1.41
CLCA3P-202ENST00000466454 ARAP1Q96P48 1450 aa6.26□□□□□ -1.41
CLCA3P-202ENST00000466454 UNCXA6NJT0 531 aa6.25□□□□□ -1.41
CLCA3P-202ENST00000466454 TRAK2O60296 914 aa6.25□□□□□ -1.41
CLCA3P-202ENST00000466454 BARGINQ6ZT62 677 aa6.25□□□□□ -1.41
CLCA3P-202ENST00000466454 STK24Q9Y6E0 443 aa6.25□□□□□ -1.41
CLCA3P-202ENST00000466454 CLSTN1O94985 981 aa6.25□□□□□ -1.41
CLCA3P-202ENST00000466454 CCDC27Q2M243 656 aa6.25□□□□□ -1.41
CLCA3P-202ENST00000466454 CCER1Q8TC90 406 aaPredicted RBP6.25□□□□□ -1.41
CLCA3P-202ENST00000466454 CUX1P39880 1505 aa6.25□□□□□ -1.41
CLCA3P-202ENST00000466454 P3H3Q8IVL6 736 aa6.24□□□□□ -1.41
CLCA3P-202ENST00000466454 DIEXFQ68CQ4 756 aaKnown RBP6.23□□□□□ -1.41
CLCA3P-202ENST00000466454 RIOK3O14730 519 aaKnown RBP6.23□□□□□ -1.41
CLCA3P-202ENST00000466454 KDM4CQ9H3R0 1056 aa6.22□□□□□ -1.41
CLCA3P-202ENST00000466454 WDR70Q9NW82 654 aa6.22□□□□□ -1.41
CLCA3P-202ENST00000466454 ARID4BQ4LE39 1312 aaPredicted RBP6.22□□□□□ -1.41
CLCA3P-202ENST00000466454 ZNF526Q8TF50 670 aaPredicted RBP6.22□□□□□ -1.41
CLCA3P-202ENST00000466454 TSPYL2Q9H2G4 693 aaPredicted RBP6.22□□□□□ -1.41
CLCA3P-202ENST00000466454 CFAP43Q8NDM7 1665 aa6.21□□□□□ -1.41
CLCA3P-202ENST00000466454 CENPBP07199 599 aaPredicted RBP6.21□□□□□ -1.41
CLCA3P-202ENST00000466454 PCDHB8Q9UN66 801 aa6.21□□□□□ -1.42
CLCA3P-202ENST00000466454 PCDHB13Q9Y5F0 798 aa6.21□□□□□ -1.42
CLCA3P-202ENST00000466454 PRR29P0C7W0 189 aa6.2□□□□□ -1.42
CLCA3P-202ENST00000466454 KIF27Q86VH2 1401 aa6.2□□□□□ -1.42
CLCA3P-202ENST00000466454 NEUROD1Q13562 356 aa6.19□□□□□ -1.42
CLCA3P-202ENST00000466454 PRDM10Q9NQV6 1147 aa6.19□□□□□ -1.42
CLCA3P-202ENST00000466454 SMARCA5O60264 1052 aaPredicted RBP6.19□□□□□ -1.42
CLCA3P-202ENST00000466454 FBXW7Q969H0 707 aa6.19□□□□□ -1.42
CLCA3P-202ENST00000466454 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.19□□□□□ -1.42
CLCA3P-202ENST00000466454 REM2Q8IYK8 340 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms