RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 RIMS1Q86UR5 1692 aaKnown RBP31.17■■■□□ 2.58
SRSF4-202ENST00000466448 LMTK3Q96Q04 1460 aa31.17■■■□□ 2.58
SRSF4-202ENST00000466448 SIGLEC1Q9BZZ2 1709 aa31.15■■■□□ 2.58
SRSF4-202ENST00000466448 CDK11AQ9UQ88 783 aaPredicted RBP31.11■■■□□ 2.57
SRSF4-202ENST00000466448 EFCAB2Q5VUJ9 269 aa31.09■■■□□ 2.57
SRSF4-202ENST00000466448 KIF14Q15058 1648 aa31.09■■■□□ 2.57
SRSF4-202ENST00000466448 MYO5CQ9NQX4 1742 aa31.07■■■□□ 2.56
SRSF4-202ENST00000466448 TROQ12816 1431 aaPredicted RBP31.07■■■□□ 2.56
SRSF4-202ENST00000466448 MLECQ14165 292 aa31.05■■■□□ 2.56
SRSF4-202ENST00000466448 PLPPR3Q6T4P5 718 aa31.05■■■□□ 2.56
SRSF4-202ENST00000466448 FBXO41Q8TF61 875 aa31.03■■■□□ 2.56
SRSF4-202ENST00000466448 ATP10AO60312 1499 aa31.02■■■□□ 2.56
SRSF4-202ENST00000466448 CLIP1P30622 1438 aa31■■■□□ 2.55
SRSF4-202ENST00000466448 C9orf84Q5VXU9 1444 aa30.99■■■□□ 2.55
SRSF4-202ENST00000466448 ARHGAP5Q13017 1502 aa30.99■■■□□ 2.55
SRSF4-202ENST00000466448 HSPA2P54652 639 aa30.99■■■□□ 2.55
SRSF4-202ENST00000466448 ZNF518AQ6AHZ1 1483 aa30.98■■■□□ 2.55
SRSF4-202ENST00000466448 LRRIQ1Q96JM4 1722 aa30.98■■■□□ 2.55
SRSF4-202ENST00000466448 ARHGEF12Q9NZN5 1544 aa30.95■■■□□ 2.55
SRSF4-202ENST00000466448 FER1L4A9Z1Z3 1794 aa30.94■■■□□ 2.54
SRSF4-202ENST00000466448 AFAP1Q8N556 730 aa30.94■■■□□ 2.54
SRSF4-202ENST00000466448 KDM5CP41229 1560 aa30.92■■■□□ 2.54
SRSF4-202ENST00000466448 CASKIN1Q8WXD9 1431 aa30.9■■■□□ 2.54
SRSF4-202ENST00000466448 CCDC18Q5T9S5 1454 aa30.87■■■□□ 2.53
SRSF4-202ENST00000466448 CDC42BPBQ9Y5S2 1711 aa30.84■■■□□ 2.53
SRSF4-202ENST00000466448 DIP2CQ9Y2E4 1556 aa30.83■■■□□ 2.53
SRSF4-202ENST00000466448 MYT1LQ9UL68 1186 aa30.83■■■□□ 2.53
SRSF4-202ENST00000466448 CEBPAP49715 358 aaPredicted RBP30.82■■■□□ 2.52
SRSF4-202ENST00000466448 PREX2Q70Z35 1606 aa30.82■■■□□ 2.52
SRSF4-202ENST00000466448 MLH3Q9UHC1 1453 aa30.81■■■□□ 2.52
SRSF4-202ENST00000466448 ABCC1P33527 1531 aa30.8■■■□□ 2.52
SRSF4-202ENST00000466448 TRAPPC8Q9Y2L5 1435 aa30.79■■■□□ 2.52
SRSF4-202ENST00000466448 REREQ9P2R6 1566 aa30.79■■■□□ 2.52
SRSF4-202ENST00000466448 ABCA6Q8N139 1617 aa30.77■■■□□ 2.52
SRSF4-202ENST00000466448 FYCO1Q9BQS8 1478 aa30.76■■■□□ 2.52
SRSF4-202ENST00000466448 PREX1Q8TCU6 1659 aa30.74■■■□□ 2.51
SRSF4-202ENST00000466448 ITSN2Q9NZM3 1697 aa30.71■■■□□ 2.51
SRSF4-202ENST00000466448 AGLP35573 1532 aa30.69■■■□□ 2.5
SRSF4-202ENST00000466448 CDC42BPAQ5VT25 1732 aa30.68■■■□□ 2.5
SRSF4-202ENST00000466448 UHRF1BP1Q6BDS2 1440 aa30.66■■■□□ 2.5
SRSF4-202ENST00000466448 CERKQ8TCT0 537 aa30.65■■■□□ 2.5
SRSF4-202ENST00000466448 KIDINS220Q9ULH0 1771 aa30.64■■■□□ 2.49
SRSF4-202ENST00000466448 ZNF777Q9ULD5 760 aaPredicted RBP30.63■■■□□ 2.49
SRSF4-202ENST00000466448 GPATCH8Q9UKJ3 1502 aaKnown RBP30.63■■■□□ 2.49
SRSF4-202ENST00000466448 SAMD9LQ8IVG5 1584 aa30.62■■■□□ 2.49
SRSF4-202ENST00000466448 ESF1Q9H501 851 aaKnown RBP30.59■■■□□ 2.49
SRSF4-202ENST00000466448 C3P01024 1663 aa30.58■■■□□ 2.49
SRSF4-202ENST00000466448 SYCP2Q9BX26 1530 aa30.58■■■□□ 2.49
SRSF4-202ENST00000466448 DMRT2Q9Y5R5 561 aa30.55■■■□□ 2.48
SRSF4-202ENST00000466448 STRCQ7RTU9 1775 aa30.55■■■□□ 2.48
SRSF4-202ENST00000466448 HNRNPMP52272 730 aaKnown RBP eCLIP30.54■■■□□ 2.483e-9■■■■□ 23.4
SRSF4-202ENST00000466448 SPAG9O60271 1321 aaKnown RBP30.53■■■□□ 2.48
SRSF4-202ENST00000466448 CNTLNQ9NXG0 1405 aa30.53■■■□□ 2.48
SRSF4-202ENST00000466448 KIAA1107Q9UPP5 1409 aa30.5■■■□□ 2.47
SRSF4-202ENST00000466448 CFDP1Q9UEE9 299 aaPredicted RBP30.5■■■□□ 2.47
SRSF4-202ENST00000466448 CCNB3Q8WWL7 1395 aa30.5■■■□□ 2.47
SRSF4-202ENST00000466448 PLEKHH2Q8IVE3 1493 aa30.48■■■□□ 2.47
SRSF4-202ENST00000466448 ATP7AQ04656 1500 aa30.47■■■□□ 2.47
SRSF4-202ENST00000466448 SETD1BQ9UPS6 1966 aaKnown RBP30.47■■■□□ 2.47
SRSF4-202ENST00000466448 MTUS2Q5JR59 1369 aa30.47■■■□□ 2.47
SRSF4-202ENST00000466448 INO80Q9ULG1 1556 aaPredicted RBP30.45■■■□□ 2.46
SRSF4-202ENST00000466448 PTPRTO14522 1441 aa30.43■■■□□ 2.46
SRSF4-202ENST00000466448 PLXNC1O60486 1568 aa30.41■■■□□ 2.46
SRSF4-202ENST00000466448 NPATQ14207 1427 aa30.41■■■□□ 2.46
SRSF4-202ENST00000466448 ZMYM3Q14202 1370 aa30.41■■■□□ 2.46
SRSF4-202ENST00000466448 MROH2AA6NES4 1674 aa30.4■■■□□ 2.46
SRSF4-202ENST00000466448 A2MP01023 1474 aa30.4■■■□□ 2.46
SRSF4-202ENST00000466448 SUPT6HQ7KZ85 1726 aaKnown RBP30.4■■■□□ 2.46
SRSF4-202ENST00000466448 NCOA1Q15788 1441 aa30.38■■■□□ 2.45
SRSF4-202ENST00000466448 TIAM1Q13009 1591 aa30.37■■■□□ 2.45
SRSF4-202ENST00000466448 ZNF644Q9H582 1327 aaPredicted RBP30.37■■■□□ 2.45
SRSF4-202ENST00000466448 EHBP1L1Q8N3D4 1523 aa30.35■■■□□ 2.45
SRSF4-202ENST00000466448 MBD5Q9P267 1494 aa30.32■■■□□ 2.44
SRSF4-202ENST00000466448 CLTCQ00610 1675 aaKnown RBP30.31■■■□□ 2.44
SRSF4-202ENST00000466448 CAMSAP1Q5T5Y3 1602 aa30.3■■■□□ 2.44
SRSF4-202ENST00000466448 GGT6Q6P531 493 aa30.3■■■□□ 2.44
SRSF4-202ENST00000466448 CEP162Q5TB80 1403 aa30.3■■■□□ 2.44
SRSF4-202ENST00000466448 LTBP4Q8N2S1 1624 aa30.28■■■□□ 2.44
SRSF4-202ENST00000466448 PTPRKQ15262 1439 aa30.26■■■□□ 2.43
SRSF4-202ENST00000466448 ADGBQ8N7X0 1667 aa30.26■■■□□ 2.43
SRSF4-202ENST00000466448 RTEL1-TNFRSF6BF6WH68 1400 aa30.23■■■□□ 2.43
SRSF4-202ENST00000466448 MYO3AQ8NEV4 1616 aa30.23■■■□□ 2.43
SRSF4-202ENST00000466448 PPP6R1Q9UPN7 881 aa30.22■■■□□ 2.43
SRSF4-202ENST00000466448 NCKAP5LQ9HCH0 1330 aa30.21■■■□□ 2.43
SRSF4-202ENST00000466448 ZNF142P52746 1687 aaPredicted RBP30.2■■■□□ 2.42
SRSF4-202ENST00000466448 CEP170BQ9Y4F5 1589 aaPredicted RBP30.19■■■□□ 2.42
SRSF4-202ENST00000466448 NCOA2Q15596 1464 aa30.19■■■□□ 2.42
SRSF4-202ENST00000466448 DHX29Q7Z478 1369 aaKnown RBP30.18■■■□□ 2.42
SRSF4-202ENST00000466448 PLA2R1Q13018 1463 aa30.17■■■□□ 2.42
SRSF4-202ENST00000466448 IQSEC2Q5JU85 1478 aa30.16■■■□□ 2.42
SRSF4-202ENST00000466448 CAMSAP2Q08AD1 1489 aa30.15■■■□□ 2.42
SRSF4-202ENST00000466448 CCDC141Q6ZP82 1450 aa30.15■■■□□ 2.42
SRSF4-202ENST00000466448 TCOF1Q13428 1488 aaKnown RBP30.13■■■□□ 2.41
SRSF4-202ENST00000466448 PKD2Q13563 968 aa30.13■■■□□ 2.41
SRSF4-202ENST00000466448 ZNF335Q9H4Z2 1342 aaPredicted RBP30.12■■■□□ 2.41
SRSF4-202ENST00000466448 KIF3BO15066 747 aa30.09■■■□□ 2.41
SRSF4-202ENST00000466448 A2ML1A8K2U0 1454 aa30.07■■■□□ 2.4
SRSF4-202ENST00000466448 DISP3Q9P2K9 1392 aa30.07■■■□□ 2.4
SRSF4-202ENST00000466448 RSPH4AQ5TD94 716 aa30.07■■■□□ 2.4
SRSF4-202ENST00000466448 KDM5DQ9BY66 1539 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms