RNA–Protein interactions for RNA: ENST00000466396.5

CLTA-206, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-206ENST00000466396 ARHGAP5Q13017 1502 aa36.26■■■■□ 3.4
CLTA-206ENST00000466396 FRMPD1Q5SYB0 1578 aa36.26■■■■□ 3.39
CLTA-206ENST00000466396 GPATCH8Q9UKJ3 1502 aaKnown RBP36.24■■■■□ 3.39
CLTA-206ENST00000466396 DENND4BO75064 1496 aaPredicted RBP36.21■■■■□ 3.39
CLTA-206ENST00000466396 LRRC9Q6ZRR7 1453 aa36.21■■■■□ 3.39
CLTA-206ENST00000466396 RICTORQ6R327 1708 aa36.2■■■■□ 3.39
CLTA-206ENST00000466396 ADGRL1O94910 1474 aa36.2■■■■□ 3.39
CLTA-206ENST00000466396 KANK4Q5T7N3 995 aaPredicted RBP36.2■■■■□ 3.39
CLTA-206ENST00000466396 SCAPERQ9BY12 1400 aa36.17■■■■□ 3.38
CLTA-206ENST00000466396 CCNB3Q8WWL7 1395 aa36.15■■■■□ 3.38
CLTA-206ENST00000466396 SUPT6HQ7KZ85 1726 aaKnown RBP36.14■■■■□ 3.38
CLTA-206ENST00000466396 NCOA2Q15596 1464 aa36.13■■■■□ 3.37
CLTA-206ENST00000466396 POGZQ7Z3K3 1410 aa36.09■■■■□ 3.37
CLTA-206ENST00000466396 ARHGEF12Q9NZN5 1544 aa36.08■■■■□ 3.37
CLTA-206ENST00000466396 ABCC1P33527 1531 aa36.07■■■■□ 3.36
CLTA-206ENST00000466396 SAMD9LQ8IVG5 1584 aa36.06■■■■□ 3.36
CLTA-206ENST00000466396 CFDP1Q9UEE9 299 aaPredicted RBP36.05■■■■□ 3.36
CLTA-206ENST00000466396 ZMYM4Q5VZL5 1548 aa36.04■■■■□ 3.36
CLTA-206ENST00000466396 APLP2Q06481 763 aa36.03■■■■□ 3.36
CLTA-206ENST00000466396 ZNF777Q9ULD5 760 aaPredicted RBP36.03■■■■□ 3.36
CLTA-206ENST00000466396 ITSN2Q9NZM3 1697 aa36.03■■■■□ 3.36
CLTA-206ENST00000466396 AFAP1Q8N556 730 aa35.99■■■■□ 3.35
CLTA-206ENST00000466396 TRAPPC8Q9Y2L5 1435 aa35.99■■■■□ 3.35
CLTA-206ENST00000466396 ZNF518AQ6AHZ1 1483 aa35.97■■■■□ 3.35
CLTA-206ENST00000466396 ZNF644Q9H582 1327 aaPredicted RBP35.96■■■■□ 3.35
CLTA-206ENST00000466396 KDM5CP41229 1560 aa35.96■■■■□ 3.35
CLTA-206ENST00000466396 YEATS2Q9ULM3 1422 aa35.94■■■■□ 3.34
CLTA-206ENST00000466396 ARHGEF40Q8TER5 1519 aa35.93■■■■□ 3.34
CLTA-206ENST00000466396 SYCP2Q9BX26 1530 aa35.93■■■■□ 3.34
CLTA-206ENST00000466396 MAGI2Q86UL8 1455 aa35.92■■■■□ 3.34
CLTA-206ENST00000466396 KIAA1107Q9UPP5 1409 aa35.91■■■■□ 3.34
CLTA-206ENST00000466396 HNRNPMP52272 730 aaKnown RBP eCLIP35.91■■■■□ 3.34
CLTA-206ENST00000466396 ZFYVE16Q7Z3T8 1539 aa35.9■■■■□ 3.34
CLTA-206ENST00000466396 PLEKHH2Q8IVE3 1493 aa35.89■■■■□ 3.34
CLTA-206ENST00000466396 KDM4FA0A1W2PPD8 638 aa35.88■■■■□ 3.33
CLTA-206ENST00000466396 MBD5Q9P267 1494 aa35.83■■■■□ 3.33
CLTA-206ENST00000466396 HECW2Q9P2P5 1572 aa35.83■■■■□ 3.33
CLTA-206ENST00000466396 MYOM3Q5VTT5 1437 aa35.83■■■■□ 3.33
CLTA-206ENST00000466396 MLH3Q9UHC1 1453 aa35.82■■■■□ 3.32
CLTA-206ENST00000466396 CAMSAP2Q08AD1 1489 aa35.81■■■■□ 3.32
CLTA-206ENST00000466396 SIGLEC1Q9BZZ2 1709 aa35.8■■■■□ 3.32
CLTA-206ENST00000466396 KIDINS220Q9ULH0 1771 aa35.77■■■■□ 3.32
CLTA-206ENST00000466396 MIA2Q96PC5 1412 aa35.75■■■■□ 3.31
CLTA-206ENST00000466396 ATP10AO60312 1499 aa35.75■■■■□ 3.31
CLTA-206ENST00000466396 DIP2CQ9Y2E4 1556 aa35.74■■■■□ 3.31
CLTA-206ENST00000466396 ABCA6Q8N139 1617 aa35.74■■■■□ 3.31
CLTA-206ENST00000466396 MYT1LQ9UL68 1186 aa35.71■■■■□ 3.31
CLTA-206ENST00000466396 SPAG9O60271 1321 aaKnown RBP35.7■■■■□ 3.31
CLTA-206ENST00000466396 C9orf84Q5VXU9 1444 aa35.69■■■■□ 3.3
CLTA-206ENST00000466396 INO80Q9ULG1 1556 aaPredicted RBP35.68■■■■□ 3.3
CLTA-206ENST00000466396 ARID4BQ4LE39 1312 aaPredicted RBP35.66■■■■□ 3.3
CLTA-206ENST00000466396 ARHGEF5Q12774 1597 aa35.66■■■■□ 3.3
CLTA-206ENST00000466396 ATP7AQ04656 1500 aa35.66■■■■□ 3.3
CLTA-206ENST00000466396 BCORL1Q5H9F3 1711 aa35.65■■■■□ 3.3
CLTA-206ENST00000466396 CCDC141Q6ZP82 1450 aa35.65■■■■□ 3.3
CLTA-206ENST00000466396 FGD6Q6ZV73 1430 aa35.64■■■■□ 3.3
CLTA-206ENST00000466396 ADAMTSL3P82987 1691 aa35.62■■■■□ 3.29
CLTA-206ENST00000466396 PTPN23Q9H3S7 1636 aa35.62■■■■□ 3.29
CLTA-206ENST00000466396 PPARGC1BQ86YN6 1023 aaKnown RBP35.62■■■■□ 3.29
CLTA-206ENST00000466396 REREQ9P2R6 1566 aa35.62■■■■□ 3.29
CLTA-206ENST00000466396 RSPH4AQ5TD94 716 aa35.6■■■■□ 3.29
CLTA-206ENST00000466396 AEBP2Q6ZN18 517 aaPredicted RBP35.59■■■■□ 3.29
CLTA-206ENST00000466396 TCOF1Q13428 1488 aaKnown RBP35.58■■■■□ 3.29
CLTA-206ENST00000466396 RTEL1-TNFRSF6BF6WH68 1400 aa35.57■■■■□ 3.28
CLTA-206ENST00000466396 AGLP35573 1532 aa35.51■■■■□ 3.27
CLTA-206ENST00000466396 MADDQ8WXG6 1647 aa35.5■■■■□ 3.27
CLTA-206ENST00000466396 MLECQ14165 292 aa35.49■■■■□ 3.27
CLTA-206ENST00000466396 PLXNC1O60486 1568 aa35.47■■■■□ 3.27
CLTA-206ENST00000466396 MAST1Q9Y2H9 1570 aa35.47■■■■□ 3.27
CLTA-206ENST00000466396 ABCC5O15440 1437 aa35.47■■■■□ 3.27
CLTA-206ENST00000466396 A2MP01023 1474 aa35.47■■■■□ 3.27
CLTA-206ENST00000466396 ADGBQ8N7X0 1667 aa35.46■■■■□ 3.27
CLTA-206ENST00000466396 TSPY4P0CV99 314 aa35.46■■■■□ 3.27
CLTA-206ENST00000466396 TSPY10P0CW01 314 aa35.46■■■■□ 3.27
CLTA-206ENST00000466396 DNMT1P26358 1616 aaKnown RBP35.43■■■■□ 3.26
CLTA-206ENST00000466396 CROCC2H7BZ55 1655 aa35.42■■■■□ 3.26
CLTA-206ENST00000466396 DAPK1P53355 1430 aa35.4■■■■□ 3.26
CLTA-206ENST00000466396 PTPRMP28827 1452 aa35.39■■■■□ 3.26
CLTA-206ENST00000466396 RIMS1Q86UR5 1692 aaKnown RBP35.39■■■■□ 3.26
CLTA-206ENST00000466396 DHX29Q7Z478 1369 aaKnown RBP35.38■■■■□ 3.25
CLTA-206ENST00000466396 FER1L4A9Z1Z3 1794 aa35.37■■■■□ 3.25
CLTA-206ENST00000466396 SHANK2Q9UPX8 1470 aa35.36■■■■□ 3.25
CLTA-206ENST00000466396 FAM50AQ14320 339 aaKnown RBP35.36■■■■□ 3.25
CLTA-206ENST00000466396 CHIC2Q9UKJ5 165 aa35.24■■■■□ 3.23
CLTA-206ENST00000466396 PTPRKQ15262 1439 aa35.23■■■■□ 3.23
CLTA-206ENST00000466396 KIF3BO15066 747 aa35.2■■■■□ 3.23
CLTA-206ENST00000466396 GGT6Q6P531 493 aa35.2■■■■□ 3.23
CLTA-206ENST00000466396 RRP7BPQ9NSQ0 103 aa35.2■■■■□ 3.23
CLTA-206ENST00000466396 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.2■■■■□ 3.23
CLTA-206ENST00000466396 RRBP1Q9P2E9 1410 aaKnown RBP35.2■■■■□ 3.23
CLTA-206ENST00000466396 DUOX2Q9NRD8 1548 aa35.19■■■■□ 3.22
CLTA-206ENST00000466396 KIF15Q9NS87 1388 aa35.19■■■■□ 3.22
CLTA-206ENST00000466396 NCOA1Q15788 1441 aa35.18■■■■□ 3.22
CLTA-206ENST00000466396 ADGRL2O95490 1459 aa35.17■■■■□ 3.22
CLTA-206ENST00000466396 ANKRD30AQ9BXX3 1397 aa35.15■■■■□ 3.22
CLTA-206ENST00000466396 CEBPAP49715 358 aaPredicted RBP35.15■■■■□ 3.22
CLTA-206ENST00000466396 PLPPR3Q6T4P5 718 aa35.14■■■■□ 3.22
CLTA-206ENST00000466396 EIF2AK4Q9P2K8 1649 aaKnown RBP35.13■■■■□ 3.21
CLTA-206ENST00000466396 CNTLNQ9NXG0 1405 aa35.12■■■■□ 3.21
CLTA-206ENST00000466396 C3P01024 1663 aa35.11■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms