RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 PREX2Q70Z35 1606 aa15.53■□□□□ 0.08
RTFDC1-205ENST00000466260 FRMPD1Q5SYB0 1578 aa15.53■□□□□ 0.08
RTFDC1-205ENST00000466260 ARHGAP5Q13017 1502 aa15.53■□□□□ 0.08
RTFDC1-205ENST00000466260 ARAP3Q8WWN8 1544 aa15.53■□□□□ 0.08
RTFDC1-205ENST00000466260 AKNAQ7Z591 1439 aa15.51■□□□□ 0.07
RTFDC1-205ENST00000466260 RAPGEF3O95398 923 aa15.5■□□□□ 0.07
RTFDC1-205ENST00000466260 PLCH2O75038 1416 aa15.5■□□□□ 0.07
RTFDC1-205ENST00000466260 VPS8Q8N3P4 1428 aa15.5■□□□□ 0.07
RTFDC1-205ENST00000466260 MTUS2Q5JR59 1369 aa15.49■□□□□ 0.07
RTFDC1-205ENST00000466260 ADGRL1O94910 1474 aa15.49■□□□□ 0.07
RTFDC1-205ENST00000466260 PHLDB1Q86UU1 1377 aa15.48■□□□□ 0.07
RTFDC1-205ENST00000466260 EHBP1L1Q8N3D4 1523 aa15.48■□□□□ 0.07
RTFDC1-205ENST00000466260 DENND4BO75064 1496 aaPredicted RBP15.47■□□□□ 0.07
RTFDC1-205ENST00000466260 TIAM1Q13009 1591 aa15.47■□□□□ 0.07
RTFDC1-205ENST00000466260 ITSN2Q9NZM3 1697 aa15.44■□□□□ 0.06
RTFDC1-205ENST00000466260 SUPT6HQ7KZ85 1726 aaKnown RBP15.44■□□□□ 0.06
RTFDC1-205ENST00000466260 EFCAB2Q5VUJ9 269 aa15.44■□□□□ 0.06
RTFDC1-205ENST00000466260 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
RTFDC1-205ENST00000466260 SCAPERQ9BY12 1400 aa15.43■□□□□ 0.06
RTFDC1-205ENST00000466260 ARHGEF40Q8TER5 1519 aa15.42■□□□□ 0.06
RTFDC1-205ENST00000466260 ZNF777Q9ULD5 760 aaPredicted RBP15.41■□□□□ 0.06
RTFDC1-205ENST00000466260 SAMD9LQ8IVG5 1584 aa15.41■□□□□ 0.06
RTFDC1-205ENST00000466260 ABCC1P33527 1531 aa15.4■□□□□ 0.06
RTFDC1-205ENST00000466260 POGZQ7Z3K3 1410 aa15.4■□□□□ 0.06
RTFDC1-205ENST00000466260 CCNB3Q8WWL7 1395 aa15.39■□□□□ 0.05
RTFDC1-205ENST00000466260 ZMYM4Q5VZL5 1548 aa15.39■□□□□ 0.05
RTFDC1-205ENST00000466260 ZFYVE16Q7Z3T8 1539 aa15.39■□□□□ 0.05
RTFDC1-205ENST00000466260 GPATCH8Q9UKJ3 1502 aaKnown RBP15.39■□□□□ 0.05
RTFDC1-205ENST00000466260 KDM4FA0A1W2PPD8 638 aa15.38■□□□□ 0.05
RTFDC1-205ENST00000466260 MYT1LQ9UL68 1186 aa15.38■□□□□ 0.05
RTFDC1-205ENST00000466260 YEATS2Q9ULM3 1422 aa15.37■□□□□ 0.05
RTFDC1-205ENST00000466260 SYCP2Q9BX26 1530 aa15.37■□□□□ 0.05
RTFDC1-205ENST00000466260 SIGLEC1Q9BZZ2 1709 aa15.37■□□□□ 0.05
RTFDC1-205ENST00000466260 HECW2Q9P2P5 1572 aa15.36■□□□□ 0.05
RTFDC1-205ENST00000466260 NCOA2Q15596 1464 aa15.35■□□□□ 0.05
RTFDC1-205ENST00000466260 ZNF518AQ6AHZ1 1483 aa15.35■□□□□ 0.05
RTFDC1-205ENST00000466260 LRRC9Q6ZRR7 1453 aa15.35■□□□□ 0.05
RTFDC1-205ENST00000466260 ARHGEF12Q9NZN5 1544 aa15.35■□□□□ 0.05
RTFDC1-205ENST00000466260 ARID4BQ4LE39 1312 aaPredicted RBP15.35■□□□□ 0.05
RTFDC1-205ENST00000466260 KDM5CP41229 1560 aa15.34■□□□□ 0.05
RTFDC1-205ENST00000466260 CFDP1Q9UEE9 299 aaPredicted RBP15.34■□□□□ 0.05
RTFDC1-205ENST00000466260 APLP2Q06481 763 aa15.33■□□□□ 0.04
RTFDC1-205ENST00000466260 NCBP3Q53F19 620 aaKnown RBP15.33■□□□□ 0.04
RTFDC1-205ENST00000466260 AFAP1Q8N556 730 aa15.33■□□□□ 0.04
RTFDC1-205ENST00000466260 BCORL1Q5H9F3 1711 aa15.33■□□□□ 0.04
RTFDC1-205ENST00000466260 TRAPPC8Q9Y2L5 1435 aa15.33■□□□□ 0.04
RTFDC1-205ENST00000466260 ABCA6Q8N139 1617 aa15.32■□□□□ 0.04
RTFDC1-205ENST00000466260 KANK4Q5T7N3 995 aaPredicted RBP15.31■□□□□ 0.04
RTFDC1-205ENST00000466260 MAP3K1Q13233 1512 aa15.31■□□□□ 0.04
RTFDC1-205ENST00000466260 MAGI2Q86UL8 1455 aa15.3■□□□□ 0.04
RTFDC1-205ENST00000466260 MADDQ8WXG6 1647 aa15.3■□□□□ 0.04
RTFDC1-205ENST00000466260 KIDINS220Q9ULH0 1771 aa15.3■□□□□ 0.04
RTFDC1-205ENST00000466260 DIP2CQ9Y2E4 1556 aa15.3■□□□□ 0.04
RTFDC1-205ENST00000466260 RIMS1Q86UR5 1692 aaKnown RBP15.29■□□□□ 0.04
RTFDC1-205ENST00000466260 HNRNPMP52272 730 aaKnown RBP eCLIP15.29■□□□□ 0.04
RTFDC1-205ENST00000466260 MAPK8IP2Q13387 824 aaPredicted RBP15.29■□□□□ 0.04
RTFDC1-205ENST00000466260 ADAMTSL3P82987 1691 aa15.28■□□□□ 0.04
RTFDC1-205ENST00000466260 ZNF644Q9H582 1327 aaPredicted RBP15.28■□□□□ 0.04
RTFDC1-205ENST00000466260 CAMSAP2Q08AD1 1489 aa15.27■□□□□ 0.04
RTFDC1-205ENST00000466260 FER1L4A9Z1Z3 1794 aa15.27■□□□□ 0.04
RTFDC1-205ENST00000466260 MLECQ14165 292 aa15.27■□□□□ 0.04
RTFDC1-205ENST00000466260 PLEKHH2Q8IVE3 1493 aa15.27■□□□□ 0.03
RTFDC1-205ENST00000466260 C9orf84Q5VXU9 1444 aa15.26■□□□□ 0.03
RTFDC1-205ENST00000466260 ATP10AO60312 1499 aa15.26■□□□□ 0.03
RTFDC1-205ENST00000466260 INO80Q9ULG1 1556 aaPredicted RBP15.24■□□□□ 0.03
RTFDC1-205ENST00000466260 ATP7AQ04656 1500 aa15.24■□□□□ 0.03
RTFDC1-205ENST00000466260 MLH3Q9UHC1 1453 aa15.24■□□□□ 0.03
RTFDC1-205ENST00000466260 SPAG9O60271 1321 aaKnown RBP15.22■□□□□ 0.03
RTFDC1-205ENST00000466260 KIAA1107Q9UPP5 1409 aa15.22■□□□□ 0.03
RTFDC1-205ENST00000466260 MYOM3Q5VTT5 1437 aa15.2■□□□□ 0.02
RTFDC1-205ENST00000466260 ADGBQ8N7X0 1667 aa15.2■□□□□ 0.02
RTFDC1-205ENST00000466260 CNKSR2Q8WXI2 1034 aa15.2■□□□□ 0.02
RTFDC1-205ENST00000466260 PTPN23Q9H3S7 1636 aa15.19■□□□□ 0.02
RTFDC1-205ENST00000466260 CCDC141Q6ZP82 1450 aa15.19■□□□□ 0.02
RTFDC1-205ENST00000466260 MBD5Q9P267 1494 aa15.19■□□□□ 0.02
RTFDC1-205ENST00000466260 REREQ9P2R6 1566 aa15.19■□□□□ 0.02
RTFDC1-205ENST00000466260 PTPRMP28827 1452 aa15.18■□□□□ 0.02
RTFDC1-205ENST00000466260 ARHGEF5Q12774 1597 aa15.17■□□□□ 0.02
RTFDC1-205ENST00000466260 PPARGC1BQ86YN6 1023 aaKnown RBP15.16■□□□□ 0.02
RTFDC1-205ENST00000466260 CROCC2H7BZ55 1655 aa15.16■□□□□ 0.02
RTFDC1-205ENST00000466260 MIA2Q96PC5 1412 aa15.14■□□□□ 0.01
RTFDC1-205ENST00000466260 A2MP01023 1474 aa15.14■□□□□ 0.01
RTFDC1-205ENST00000466260 PLXNC1O60486 1568 aa15.13■□□□□ 0.01
RTFDC1-205ENST00000466260 AGLP35573 1532 aa15.12■□□□□ 0.01
RTFDC1-205ENST00000466260 FGD6Q6ZV73 1430 aa15.11■□□□□ 0.01
RTFDC1-205ENST00000466260 NPM3O75607 178 aaKnown RBP15.11■□□□□ 0.01
RTFDC1-205ENST00000466260 CLTCQ00610 1675 aaKnown RBP15.11■□□□□ 0.01
RTFDC1-205ENST00000466260 C3P01024 1663 aa15.1■□□□□ 0.01
RTFDC1-205ENST00000466260 DNMT1P26358 1616 aaKnown RBP15.1■□□□□ 0.01
RTFDC1-205ENST00000466260 RTEL1-TNFRSF6BF6WH68 1400 aa15.09■□□□□ 0.01
RTFDC1-205ENST00000466260 TSPY4P0CV99 314 aa15.09■□□□□ 0.01
RTFDC1-205ENST00000466260 TSPY10P0CW01 314 aa15.09■□□□□ 0.01
RTFDC1-205ENST00000466260 MAST1Q9Y2H9 1570 aa15.09■□□□□ 0.01
RTFDC1-205ENST00000466260 ESF1Q9H501 851 aaKnown RBP15.08■□□□□ 0
RTFDC1-205ENST00000466260 TCOF1Q13428 1488 aaKnown RBP15.07■□□□□ 0
RTFDC1-205ENST00000466260 CEBPAP49715 358 aaPredicted RBP15.06■□□□□ 0
RTFDC1-205ENST00000466260 FAM50AQ14320 339 aaKnown RBP15.06■□□□□ 0
RTFDC1-205ENST00000466260 RSPH4AQ5TD94 716 aa15.06■□□□□ 0
RTFDC1-205ENST00000466260 GGT6Q6P531 493 aa15.06■□□□□ 0
RTFDC1-205ENST00000466260 DAPK1P53355 1430 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms