RNA–Protein interactions for RNA: ENST00000466252.5

SNX21-208, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-208ENST00000466252 RAPGEF3O95398 923 aa36.21■■■■□ 3.39
SNX21-208ENST00000466252 CFAP74Q9C0B2 1584 aa36.21■■■■□ 3.39
SNX21-208ENST00000466252 APLP2Q06481 763 aa36.2■■■■□ 3.39
SNX21-208ENST00000466252 PREX2Q70Z35 1606 aa36.18■■■■□ 3.38
SNX21-208ENST00000466252 ARHGAP5Q13017 1502 aa36.17■■■■□ 3.38
SNX21-208ENST00000466252 CCNB3Q8WWL7 1395 aa36.16■■■■□ 3.38
SNX21-208ENST00000466252 SCAPERQ9BY12 1400 aa36.14■■■■□ 3.38
SNX21-208ENST00000466252 DENND4BO75064 1496 aaPredicted RBP36.13■■■■□ 3.37
SNX21-208ENST00000466252 NCOA2Q15596 1464 aa36.13■■■■□ 3.37
SNX21-208ENST00000466252 SUPT6HQ7KZ85 1726 aaKnown RBP36.12■■■■□ 3.37
SNX21-208ENST00000466252 ADGRL1O94910 1474 aa36.11■■■■□ 3.37
SNX21-208ENST00000466252 CFDP1Q9UEE9 299 aaPredicted RBP36.1■■■■□ 3.37
SNX21-208ENST00000466252 FRMPD1Q5SYB0 1578 aa36.06■■■■□ 3.36
SNX21-208ENST00000466252 RICTORQ6R327 1708 aa36.06■■■■□ 3.36
SNX21-208ENST00000466252 ZNF777Q9ULD5 760 aaPredicted RBP36.04■■■■□ 3.36
SNX21-208ENST00000466252 ARHGEF12Q9NZN5 1544 aa36.02■■■■□ 3.36
SNX21-208ENST00000466252 AFAP1Q8N556 730 aa35.99■■■■□ 3.35
SNX21-208ENST00000466252 SAMD9LQ8IVG5 1584 aa35.98■■■■□ 3.35
SNX21-208ENST00000466252 ZNF644Q9H582 1327 aaPredicted RBP35.98■■■■□ 3.35
SNX21-208ENST00000466252 POGZQ7Z3K3 1410 aa35.98■■■■□ 3.35
SNX21-208ENST00000466252 ABCC1P33527 1531 aa35.96■■■■□ 3.35
SNX21-208ENST00000466252 ITSN2Q9NZM3 1697 aa35.95■■■■□ 3.35
SNX21-208ENST00000466252 HNRNPMP52272 730 aaKnown RBP eCLIP35.95■■■■□ 3.35
SNX21-208ENST00000466252 KIAA1107Q9UPP5 1409 aa35.93■■■■□ 3.34
SNX21-208ENST00000466252 TRAPPC8Q9Y2L5 1435 aa35.93■■■■□ 3.34
SNX21-208ENST00000466252 ZMYM4Q5VZL5 1548 aa35.91■■■■□ 3.34
SNX21-208ENST00000466252 ZNF518AQ6AHZ1 1483 aa35.89■■■■□ 3.34
SNX21-208ENST00000466252 PLEKHH2Q8IVE3 1493 aa35.88■■■■□ 3.33
SNX21-208ENST00000466252 MAGI2Q86UL8 1455 aa35.87■■■■□ 3.33
SNX21-208ENST00000466252 KDM5CP41229 1560 aa35.85■■■■□ 3.33
SNX21-208ENST00000466252 MYOM3Q5VTT5 1437 aa35.85■■■■□ 3.33
SNX21-208ENST00000466252 SYCP2Q9BX26 1530 aa35.83■■■■□ 3.33
SNX21-208ENST00000466252 MBD5Q9P267 1494 aa35.83■■■■□ 3.33
SNX21-208ENST00000466252 MIA2Q96PC5 1412 aa35.83■■■■□ 3.33
SNX21-208ENST00000466252 YEATS2Q9ULM3 1422 aa35.83■■■■□ 3.33
SNX21-208ENST00000466252 MLH3Q9UHC1 1453 aa35.8■■■■□ 3.32
SNX21-208ENST00000466252 CAMSAP2Q08AD1 1489 aa35.76■■■■□ 3.32
SNX21-208ENST00000466252 RSPH4AQ5TD94 716 aa35.76■■■■□ 3.32
SNX21-208ENST00000466252 ZFYVE16Q7Z3T8 1539 aa35.76■■■■□ 3.31
SNX21-208ENST00000466252 KDM4FA0A1W2PPD8 638 aa35.74■■■■□ 3.31
SNX21-208ENST00000466252 PPARGC1BQ86YN6 1023 aaKnown RBP35.74■■■■□ 3.31
SNX21-208ENST00000466252 ARHGEF40Q8TER5 1519 aa35.73■■■■□ 3.31
SNX21-208ENST00000466252 SPAG9O60271 1321 aaKnown RBP35.71■■■■□ 3.31
SNX21-208ENST00000466252 ATP10AO60312 1499 aa35.7■■■■□ 3.31
SNX21-208ENST00000466252 HECW2Q9P2P5 1572 aa35.7■■■■□ 3.31
SNX21-208ENST00000466252 KIDINS220Q9ULH0 1771 aa35.69■■■■□ 3.3
SNX21-208ENST00000466252 MYT1LQ9UL68 1186 aa35.69■■■■□ 3.3
SNX21-208ENST00000466252 FGD6Q6ZV73 1430 aa35.66■■■■□ 3.3
SNX21-208ENST00000466252 ARHGEF5Q12774 1597 aa35.63■■■■□ 3.29
SNX21-208ENST00000466252 PTPN23Q9H3S7 1636 aa35.61■■■■□ 3.29
SNX21-208ENST00000466252 TCOF1Q13428 1488 aaKnown RBP35.6■■■■□ 3.29
SNX21-208ENST00000466252 CCDC141Q6ZP82 1450 aa35.6■■■■□ 3.29
SNX21-208ENST00000466252 SIGLEC1Q9BZZ2 1709 aa35.6■■■■□ 3.29
SNX21-208ENST00000466252 DIP2CQ9Y2E4 1556 aa35.6■■■■□ 3.29
SNX21-208ENST00000466252 RTEL1-TNFRSF6BF6WH68 1400 aa35.6■■■■□ 3.29
SNX21-208ENST00000466252 C9orf84Q5VXU9 1444 aa35.58■■■■□ 3.29
SNX21-208ENST00000466252 ABCA6Q8N139 1617 aa35.58■■■■□ 3.29
SNX21-208ENST00000466252 ARID4BQ4LE39 1312 aaPredicted RBP35.57■■■■□ 3.29
SNX21-208ENST00000466252 TSPY4P0CV99 314 aa35.57■■■■□ 3.28
SNX21-208ENST00000466252 TSPY10P0CW01 314 aa35.57■■■■□ 3.28
SNX21-208ENST00000466252 ATP7AQ04656 1500 aa35.57■■■■□ 3.28
SNX21-208ENST00000466252 INO80Q9ULG1 1556 aaPredicted RBP35.56■■■■□ 3.28
SNX21-208ENST00000466252 REREQ9P2R6 1566 aa35.53■■■■□ 3.28
SNX21-208ENST00000466252 ABCC5O15440 1437 aa35.49■■■■□ 3.27
SNX21-208ENST00000466252 BCORL1Q5H9F3 1711 aa35.48■■■■□ 3.27
SNX21-208ENST00000466252 ADAMTSL3P82987 1691 aa35.45■■■■□ 3.27
SNX21-208ENST00000466252 MAST1Q9Y2H9 1570 aa35.44■■■■□ 3.26
SNX21-208ENST00000466252 AGLP35573 1532 aa35.44■■■■□ 3.26
SNX21-208ENST00000466252 FAM50AQ14320 339 aaKnown RBP35.44■■■■□ 3.26
SNX21-208ENST00000466252 A2MP01023 1474 aa35.42■■■■□ 3.26
SNX21-208ENST00000466252 DAPK1P53355 1430 aa35.41■■■■□ 3.26
SNX21-208ENST00000466252 MLECQ14165 292 aa35.41■■■■□ 3.26
SNX21-208ENST00000466252 DNMT1P26358 1616 aaKnown RBP35.4■■■■□ 3.26
SNX21-208ENST00000466252 DHX29Q7Z478 1369 aaKnown RBP35.39■■■■□ 3.26
SNX21-208ENST00000466252 ADGBQ8N7X0 1667 aa35.38■■■■□ 3.25
SNX21-208ENST00000466252 AEBP2Q6ZN18 517 aaPredicted RBP35.37■■■■□ 3.25
SNX21-208ENST00000466252 PLXNC1O60486 1568 aa35.36■■■■□ 3.25
SNX21-208ENST00000466252 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.35■■■■□ 3.25
SNX21-208ENST00000466252 SHANK2Q9UPX8 1470 aa35.34■■■■□ 3.25
SNX21-208ENST00000466252 CROCC2H7BZ55 1655 aa35.32■■■■□ 3.24
SNX21-208ENST00000466252 CHIC2Q9UKJ5 165 aa35.3■■■■□ 3.24
SNX21-208ENST00000466252 RRBP1Q9P2E9 1410 aaKnown RBP35.3■■■■□ 3.24
SNX21-208ENST00000466252 MADDQ8WXG6 1647 aa35.28■■■■□ 3.24
SNX21-208ENST00000466252 PTPRKQ15262 1439 aa35.27■■■■□ 3.24
SNX21-208ENST00000466252 RRP7BPQ9NSQ0 103 aa35.26■■■■□ 3.24
SNX21-208ENST00000466252 NCOA1Q15788 1441 aa35.23■■■■□ 3.23
SNX21-208ENST00000466252 PTPRMP28827 1452 aa35.22■■■■□ 3.23
SNX21-208ENST00000466252 KIF3BO15066 747 aa35.22■■■■□ 3.23
SNX21-208ENST00000466252 GGT6Q6P531 493 aa35.21■■■■□ 3.23
SNX21-208ENST00000466252 ANKRD30AQ9BXX3 1397 aa35.2■■■■□ 3.23
SNX21-208ENST00000466252 ADGRL2O95490 1459 aa35.19■■■■□ 3.22
SNX21-208ENST00000466252 KIF15Q9NS87 1388 aa35.19■■■■□ 3.22
SNX21-208ENST00000466252 RIMS1Q86UR5 1692 aaKnown RBP35.18■■■■□ 3.22
SNX21-208ENST00000466252 PPP6R1Q9UPN7 881 aa35.18■■■■□ 3.22
SNX21-208ENST00000466252 FER1L4A9Z1Z3 1794 aa35.18■■■■□ 3.22
SNX21-208ENST00000466252 DUOX2Q9NRD8 1548 aa35.17■■■■□ 3.22
SNX21-208ENST00000466252 ITGAEP38570 1179 aa35.13■■■■□ 3.21
SNX21-208ENST00000466252 CEBPAP49715 358 aaPredicted RBP35.08■■■■□ 3.21
SNX21-208ENST00000466252 ESF1Q9H501 851 aaKnown RBP35.08■■■■□ 3.21
SNX21-208ENST00000466252 ROCK1Q13464 1354 aa35.08■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms