RNA–Protein interactions for RNA: ENST00000465298.1

ERGIC3-212, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-212ENST00000465298 ARHGAP5Q13017 1502 aa20.45■□□□□ 0.86
ERGIC3-212ENST00000465298 NCOA2Q15596 1464 aa20.43■□□□□ 0.86
ERGIC3-212ENST00000465298 GPATCH8Q9UKJ3 1502 aaKnown RBP20.43■□□□□ 0.86
ERGIC3-212ENST00000465298 KANK4Q5T7N3 995 aaPredicted RBP20.42■□□□□ 0.86
ERGIC3-212ENST00000465298 PLEKHH2Q8IVE3 1493 aa20.42■□□□□ 0.86
ERGIC3-212ENST00000465298 DENND4BO75064 1496 aaPredicted RBP20.4■□□□□ 0.86
ERGIC3-212ENST00000465298 PREX2Q70Z35 1606 aa20.39■□□□□ 0.86
ERGIC3-212ENST00000465298 ADGRL1O94910 1474 aa20.39■□□□□ 0.85
ERGIC3-212ENST00000465298 RSPH4AQ5TD94 716 aa20.38■□□□□ 0.85
ERGIC3-212ENST00000465298 ITSN2Q9NZM3 1697 aa20.38■□□□□ 0.85
ERGIC3-212ENST00000465298 MIA2Q96PC5 1412 aa20.36■□□□□ 0.85
ERGIC3-212ENST00000465298 SCAPERQ9BY12 1400 aa20.36■□□□□ 0.85
ERGIC3-212ENST00000465298 ZNF777Q9ULD5 760 aaPredicted RBP20.36■□□□□ 0.85
ERGIC3-212ENST00000465298 KIAA1107Q9UPP5 1409 aa20.36■□□□□ 0.85
ERGIC3-212ENST00000465298 MYOM3Q5VTT5 1437 aa20.34■□□□□ 0.85
ERGIC3-212ENST00000465298 CDC42BPAQ5VT25 1732 aa20.33■□□□□ 0.84
ERGIC3-212ENST00000465298 ZNF518AQ6AHZ1 1483 aa20.32■□□□□ 0.84
ERGIC3-212ENST00000465298 CDC42BPBQ9Y5S2 1711 aa20.32■□□□□ 0.84
ERGIC3-212ENST00000465298 COL17A1Q9UMD9 1497 aaPredicted RBP20.31■□□□□ 0.84
ERGIC3-212ENST00000465298 MAGI2Q86UL8 1455 aa20.3■□□□□ 0.84
ERGIC3-212ENST00000465298 RAPGEF3O95398 923 aa20.3■□□□□ 0.84
ERGIC3-212ENST00000465298 POGZQ7Z3K3 1410 aa20.29■□□□□ 0.84
ERGIC3-212ENST00000465298 ABCC1P33527 1531 aa20.27■□□□□ 0.83
ERGIC3-212ENST00000465298 MYT1LQ9UL68 1186 aa20.24■□□□□ 0.83
ERGIC3-212ENST00000465298 ZMYM4Q5VZL5 1548 aa20.23■□□□□ 0.83
ERGIC3-212ENST00000465298 TSPY4P0CV99 314 aa20.23■□□□□ 0.83
ERGIC3-212ENST00000465298 TSPY10P0CW01 314 aa20.23■□□□□ 0.83
ERGIC3-212ENST00000465298 SAMD9LQ8IVG5 1584 aa20.22■□□□□ 0.83
ERGIC3-212ENST00000465298 FGD6Q6ZV73 1430 aa20.22■□□□□ 0.83
ERGIC3-212ENST00000465298 HNRNPMP52272 730 aaKnown RBP eCLIP20.22■□□□□ 0.83
ERGIC3-212ENST00000465298 AFAP1Q8N556 730 aa20.22■□□□□ 0.83
ERGIC3-212ENST00000465298 CAMSAP2Q08AD1 1489 aa20.21■□□□□ 0.83
ERGIC3-212ENST00000465298 SPAG9O60271 1321 aaKnown RBP20.21■□□□□ 0.83
ERGIC3-212ENST00000465298 MLH3Q9UHC1 1453 aa20.2■□□□□ 0.82
ERGIC3-212ENST00000465298 SYCP2Q9BX26 1530 aa20.2■□□□□ 0.82
ERGIC3-212ENST00000465298 RICTORQ6R327 1708 aa20.19■□□□□ 0.82
ERGIC3-212ENST00000465298 KDM5CP41229 1560 aa20.19■□□□□ 0.82
ERGIC3-212ENST00000465298 ZNF644Q9H582 1327 aaPredicted RBP20.19■□□□□ 0.82
ERGIC3-212ENST00000465298 TRAPPC8Q9Y2L5 1435 aa20.18■□□□□ 0.82
ERGIC3-212ENST00000465298 CCDC141Q6ZP82 1450 aa20.18■□□□□ 0.82
ERGIC3-212ENST00000465298 RTEL1-TNFRSF6BF6WH68 1400 aa20.17■□□□□ 0.82
ERGIC3-212ENST00000465298 MBD5Q9P267 1494 aa20.17■□□□□ 0.82
ERGIC3-212ENST00000465298 ARHGEF12Q9NZN5 1544 aa20.17■□□□□ 0.82
ERGIC3-212ENST00000465298 FRMPD1Q5SYB0 1578 aa20.17■□□□□ 0.82
ERGIC3-212ENST00000465298 ZFYVE16Q7Z3T8 1539 aa20.16■□□□□ 0.82
ERGIC3-212ENST00000465298 ARHGEF5Q12774 1597 aa20.16■□□□□ 0.82
ERGIC3-212ENST00000465298 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.15■□□□□ 0.82
ERGIC3-212ENST00000465298 TCOF1Q13428 1488 aaKnown RBP20.15■□□□□ 0.82
ERGIC3-212ENST00000465298 HECW2Q9P2P5 1572 aa20.13■□□□□ 0.81
ERGIC3-212ENST00000465298 PTPN23Q9H3S7 1636 aa20.13■□□□□ 0.81
ERGIC3-212ENST00000465298 ATP10AO60312 1499 aa20.12■□□□□ 0.81
ERGIC3-212ENST00000465298 FAM50AQ14320 339 aaKnown RBP20.12■□□□□ 0.81
ERGIC3-212ENST00000465298 ARHGEF40Q8TER5 1519 aa20.12■□□□□ 0.81
ERGIC3-212ENST00000465298 PPARGC1BQ86YN6 1023 aaKnown RBP20.1■□□□□ 0.81
ERGIC3-212ENST00000465298 C9orf84Q5VXU9 1444 aa20.1■□□□□ 0.81
ERGIC3-212ENST00000465298 ARID4BQ4LE39 1312 aaPredicted RBP20.08■□□□□ 0.81
ERGIC3-212ENST00000465298 ATP7AQ04656 1500 aa20.07■□□□□ 0.8
ERGIC3-212ENST00000465298 SHANK2Q9UPX8 1470 aa20.07■□□□□ 0.8
ERGIC3-212ENST00000465298 YEATS2Q9ULM3 1422 aa20.07■□□□□ 0.8
ERGIC3-212ENST00000465298 RRBP1Q9P2E9 1410 aaKnown RBP20.05■□□□□ 0.8
ERGIC3-212ENST00000465298 REREQ9P2R6 1566 aa20.04■□□□□ 0.8
ERGIC3-212ENST00000465298 DAPK1P53355 1430 aa20.04■□□□□ 0.8
ERGIC3-212ENST00000465298 INO80Q9ULG1 1556 aaPredicted RBP20.03■□□□□ 0.8
ERGIC3-212ENST00000465298 MAST1Q9Y2H9 1570 aa20.03■□□□□ 0.8
ERGIC3-212ENST00000465298 ABCC5O15440 1437 aa20.02■□□□□ 0.8
ERGIC3-212ENST00000465298 ANKRD30AQ9BXX3 1397 aa20.02■□□□□ 0.8
ERGIC3-212ENST00000465298 DNMT1P26358 1616 aaKnown RBP20.02■□□□□ 0.79
ERGIC3-212ENST00000465298 KIDINS220Q9ULH0 1771 aa20■□□□□ 0.79
ERGIC3-212ENST00000465298 DIP2CQ9Y2E4 1556 aa20■□□□□ 0.79
ERGIC3-212ENST00000465298 DHX29Q7Z478 1369 aaKnown RBP20■□□□□ 0.79
ERGIC3-212ENST00000465298 PPP6R1Q9UPN7 881 aa20■□□□□ 0.79
ERGIC3-212ENST00000465298 AGLP35573 1532 aa20■□□□□ 0.79
ERGIC3-212ENST00000465298 A2MP01023 1474 aa19.99■□□□□ 0.79
ERGIC3-212ENST00000465298 ESF1Q9H501 851 aaKnown RBP19.97■□□□□ 0.79
ERGIC3-212ENST00000465298 ABCA6Q8N139 1617 aa19.96■□□□□ 0.79
ERGIC3-212ENST00000465298 ADGBQ8N7X0 1667 aa19.96■□□□□ 0.79
ERGIC3-212ENST00000465298 PLXNC1O60486 1568 aa19.95■□□□□ 0.78
ERGIC3-212ENST00000465298 ROCK1Q13464 1354 aa19.95■□□□□ 0.78
ERGIC3-212ENST00000465298 DUOX2Q9NRD8 1548 aa19.93■□□□□ 0.78
ERGIC3-212ENST00000465298 KIF15Q9NS87 1388 aa19.93■□□□□ 0.78
ERGIC3-212ENST00000465298 NCOA1Q15788 1441 aa19.93■□□□□ 0.78
ERGIC3-212ENST00000465298 ADGRL2O95490 1459 aa19.92■□□□□ 0.78
ERGIC3-212ENST00000465298 CROCC2H7BZ55 1655 aa19.92■□□□□ 0.78
ERGIC3-212ENST00000465298 CHIC2Q9UKJ5 165 aa19.92■□□□□ 0.78
ERGIC3-212ENST00000465298 ERBINQ96RT1 1412 aa19.91■□□□□ 0.78
ERGIC3-212ENST00000465298 RRP7BPQ9NSQ0 103 aa19.9■□□□□ 0.78
ERGIC3-212ENST00000465298 KIF3BO15066 747 aa19.89■□□□□ 0.77
ERGIC3-212ENST00000465298 CNTLNQ9NXG0 1405 aa19.88■□□□□ 0.77
ERGIC3-212ENST00000465298 ACIN1Q9UKV3 1341 aaKnown RBP19.88■□□□□ 0.77
ERGIC3-212ENST00000465298 ITGAEP38570 1179 aa19.88■□□□□ 0.77
ERGIC3-212ENST00000465298 MLECQ14165 292 aa19.88■□□□□ 0.77
ERGIC3-212ENST00000465298 FAM135AQ9P2D6 1515 aa19.86■□□□□ 0.77
ERGIC3-212ENST00000465298 BCORL1Q5H9F3 1711 aa19.86■□□□□ 0.77
ERGIC3-212ENST00000465298 KDM4FA0A1W2PPD8 638 aa19.85■□□□□ 0.77
ERGIC3-212ENST00000465298 GGT6Q6P531 493 aa19.85■□□□□ 0.77
ERGIC3-212ENST00000465298 AEBP2Q6ZN18 517 aaPredicted RBP19.85■□□□□ 0.77
ERGIC3-212ENST00000465298 EIF2AK4Q9P2K8 1649 aaKnown RBP19.84■□□□□ 0.77
ERGIC3-212ENST00000465298 ANKRD50Q9ULJ7 1429 aa19.84■□□□□ 0.77
ERGIC3-212ENST00000465298 KANK1Q14678 1352 aa19.83■□□□□ 0.76
ERGIC3-212ENST00000465298 PTPRKQ15262 1439 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms