RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	CRISPLD2	Q9H0B8	497 aa		11.39	□□□□□ -0.59
CACNA1C-223	ENST00000465278	METRN	Q9UJH8	293 aa		11.38	□□□□□ -0.59
CACNA1C-223	ENST00000465278	KCNV2	Q8TDN2	545 aa		11.37	□□□□□ -0.59
CACNA1C-223	ENST00000465278	E2F4	Q16254	413 aa		11.36	□□□□□ -0.59
CACNA1C-223	ENST00000465278	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.36	□□□□□ -0.59
CACNA1C-223	ENST00000465278	NISCH	Q9Y2I1	1504 aa		11.35	□□□□□ -0.59
CACNA1C-223	ENST00000465278	DDX27	Q96GQ7	796 aa	Known RBP	11.34	□□□□□ -0.59
CACNA1C-223	ENST00000465278	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.34	□□□□□ -0.59
CACNA1C-223	ENST00000465278	GPHN	Q9NQX3	736 aa	Predicted RBP	11.34	□□□□□ -0.59
CACNA1C-223	ENST00000465278	P3H3	Q8IVL6	736 aa		11.33	□□□□□ -0.6
CACNA1C-223	ENST00000465278	MFSD10	Q14728	455 aa		11.32	□□□□□ -0.6
CACNA1C-223	ENST00000465278	TMC2	Q8TDI7	906 aa		11.31	□□□□□ -0.6
CACNA1C-223	ENST00000465278	C2orf72	A6NCS6	295 aa		11.29	□□□□□ -0.6
CACNA1C-223	ENST00000465278	DSG2	Q14126	1118 aa		11.29	□□□□□ -0.6
CACNA1C-223	ENST00000465278	PRKCSH	P14314	528 aa	Predicted RBP	11.28	□□□□□ -0.6
CACNA1C-223	ENST00000465278	PPP1R15B	Q5SWA1	713 aa		11.28	□□□□□ -0.6
CACNA1C-223	ENST00000465278	TMEM92	Q6UXU6	159 aa		11.26	□□□□□ -0.61
CACNA1C-223	ENST00000465278	ARHGEF1	Q92888	912 aa	Known RBP	11.25	□□□□□ -0.61
CACNA1C-223	ENST00000465278	PLPP6	Q8IY26	295 aa		11.24	□□□□□ -0.61
CACNA1C-223	ENST00000465278	FOXK1	P85037	733 aa		11.23	□□□□□ -0.61
CACNA1C-223	ENST00000465278	KIF3C	O14782	793 aa		11.22	□□□□□ -0.61
CACNA1C-223	ENST00000465278	CAMK2B	Q13554	666 aa		11.21	□□□□□ -0.61
CACNA1C-223	ENST00000465278	TPRN	Q4KMQ1	711 aa		11.21	□□□□□ -0.61
CACNA1C-223	ENST00000465278	C3orf67	Q6ZVT6	689 aa		11.2	□□□□□ -0.62
CACNA1C-223	ENST00000465278	EMILIN3	Q9NT22	766 aa		11.19	□□□□□ -0.62
CACNA1C-223	ENST00000465278	SEMA3E	O15041	775 aa		11.18	□□□□□ -0.62
CACNA1C-223	ENST00000465278	POTEB2	H3BUK9	544 aa		11.16	□□□□□ -0.62
CACNA1C-223	ENST00000465278	POTEJ	P0CG39	1038 aa		11.15	□□□□□ -0.62
CACNA1C-223	ENST00000465278	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.15	□□□□□ -0.62
CACNA1C-223	ENST00000465278	DPYSL4	O14531	572 aa		11.14	□□□□□ -0.63
CACNA1C-223	ENST00000465278	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
CACNA1C-223	ENST00000465278	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.12	□□□□□ -0.63
CACNA1C-223	ENST00000465278	MAP3K9	P80192	1104 aa		11.1	□□□□□ -0.63
CACNA1C-223	ENST00000465278	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
CACNA1C-223	ENST00000465278	TESPA1	A2RU30	521 aa	Predicted RBP	11.09	□□□□□ -0.63
CACNA1C-223	ENST00000465278	MLLT3	P42568	568 aa	Predicted RBP	11.06	□□□□□ -0.64
CACNA1C-223	ENST00000465278	LMOD2	Q6P5Q4	547 aa		11.05	□□□□□ -0.64
CACNA1C-223	ENST00000465278	TULP1	O00294	542 aa	Predicted RBP	11.04	□□□□□ -0.64
CACNA1C-223	ENST00000465278	OXER1	Q8TDS5	423 aa		11.04	□□□□□ -0.64
CACNA1C-223	ENST00000465278	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.03	□□□□□ -0.64
CACNA1C-223	ENST00000465278	SLAIN1	Q8ND83	568 aa		11.02	□□□□□ -0.65
CACNA1C-223	ENST00000465278	SMYD5	Q6GMV2	418 aa		11.01	□□□□□ -0.65
CACNA1C-223	ENST00000465278	TBC1D12	O60347	775 aa		11	□□□□□ -0.65
CACNA1C-223	ENST00000465278	PDIA6	Q15084	440 aa		11	□□□□□ -0.65
CACNA1C-223	ENST00000465278	GRXCR2	A6NFK2	248 aa		10.99	□□□□□ -0.65
CACNA1C-223	ENST00000465278	PTCD2	Q8WV60	388 aa	Known RBP	10.99	□□□□□ -0.65
CACNA1C-223	ENST00000465278	RBM26	Q5T8P6	1007 aa	Known RBP	10.98	□□□□□ -0.65
CACNA1C-223	ENST00000465278	SCUBE2	Q9NQ36	999 aa		10.98	□□□□□ -0.65
CACNA1C-223	ENST00000465278	EVI5	O60447	810 aa		10.97	□□□□□ -0.65
CACNA1C-223	ENST00000465278	MAMSTR	Q6ZN01	415 aa		10.96	□□□□□ -0.65
CACNA1C-223	ENST00000465278	SLC34A2	O95436	690 aa		10.95	□□□□□ -0.66
CACNA1C-223	ENST00000465278	DDX12P	Q92771	950 aa		10.95	□□□□□ -0.66
CACNA1C-223	ENST00000465278	PCDHGA4	Q9Y5G9	962 aa		10.94	□□□□□ -0.66
CACNA1C-223	ENST00000465278	ZC3H15	Q8WU90	426 aa	Known RBP	10.92	□□□□□ -0.66
CACNA1C-223	ENST00000465278	HOXB3	P14651	431 aa	Predicted RBP	10.9	□□□□□ -0.66
CACNA1C-223	ENST00000465278	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.9	□□□□□ -0.66
CACNA1C-223	ENST00000465278	CCDC180	Q9P1Z9	1646 aa		10.9	□□□□□ -0.66
CACNA1C-223	ENST00000465278	ARSI	Q5FYB1	569 aa		10.89	□□□□□ -0.67
CACNA1C-223	ENST00000465278	OTUD5	Q96G74	571 aa		10.89	□□□□□ -0.67
CACNA1C-223	ENST00000465278	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.89	□□□□□ -0.67
CACNA1C-223	ENST00000465278	CUX2	O14529	1486 aa		10.88	□□□□□ -0.67
CACNA1C-223	ENST00000465278	PTGER2	P43116	358 aa		10.88	□□□□□ -0.67
CACNA1C-223	ENST00000465278	DOK7	Q18PE1	504 aa		10.88	□□□□□ -0.67
CACNA1C-223	ENST00000465278	RB1CC1	Q8TDY2	1594 aa		10.87	□□□□□ -0.67
CACNA1C-223	ENST00000465278	OSBP	P22059	807 aa		10.87	□□□□□ -0.67
CACNA1C-223	ENST00000465278	LHX8	Q68G74	356 aa		10.87	□□□□□ -0.67
CACNA1C-223	ENST00000465278	CECR2	Q9BXF3	1484 aa		10.87	□□□□□ -0.67
CACNA1C-223	ENST00000465278	UNC13A	Q9UPW8	1703 aa		10.86	□□□□□ -0.67
CACNA1C-223	ENST00000465278	ZNF710	Q8N1W2	664 aa		10.85	□□□□□ -0.67
CACNA1C-223	ENST00000465278	NUTM2F	A1L443	756 aa		10.84	□□□□□ -0.67
CACNA1C-223	ENST00000465278	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.84	□□□□□ -0.67
CACNA1C-223	ENST00000465278	NUDT7	P0C024	238 aa		10.84	□□□□□ -0.67
CACNA1C-223	ENST00000465278	PRIM1	P49642	420 aa	Known RBP	10.83	□□□□□ -0.68
CACNA1C-223	ENST00000465278	GPR153	Q6NV75	609 aa		10.83	□□□□□ -0.68
CACNA1C-223	ENST00000465278	GPIHBP1	Q8IV16	184 aa		10.83	□□□□□ -0.68
CACNA1C-223	ENST00000465278	KDM4F	A0A1W2PPD8	638 aa		10.82	□□□□□ -0.68
CACNA1C-223	ENST00000465278	RIMBP2	O15034	1052 aa		10.81	□□□□□ -0.68
CACNA1C-223	ENST00000465278	ZMYND10	O75800	440 aa		10.81	□□□□□ -0.68
CACNA1C-223	ENST00000465278	CC2D2A	Q9P2K1	1620 aa		10.8	□□□□□ -0.68
CACNA1C-223	ENST00000465278	RBM33	Q96EV2	1170 aa	Known RBP	10.8	□□□□□ -0.68
CACNA1C-223	ENST00000465278	SLC24A3	Q9HC58	644 aa		10.8	□□□□□ -0.68
CACNA1C-223	ENST00000465278	PCDHGA10	Q9Y5H3	936 aa		10.79	□□□□□ -0.68
CACNA1C-223	ENST00000465278	SNPH	O15079	494 aa		10.78	□□□□□ -0.68
CACNA1C-223	ENST00000465278	KRI1	Q8N9T8	703 aa	Known RBP	10.78	□□□□□ -0.68
CACNA1C-223	ENST00000465278	PHF14	O94880	888 aa		10.77	□□□□□ -0.69
CACNA1C-223	ENST00000465278	ZSWIM6	Q9HCJ5	1215 aa		10.77	□□□□□ -0.69
CACNA1C-223	ENST00000465278	BARGIN	Q6ZT62	677 aa		10.76	□□□□□ -0.69
CACNA1C-223	ENST00000465278	EPAS1	Q99814	870 aa		10.76	□□□□□ -0.69
CACNA1C-223	ENST00000465278	LHX6	Q9UPM6	363 aa		10.75	□□□□□ -0.69
CACNA1C-223	ENST00000465278	MAP3K7	O43318	606 aa		10.74	□□□□□ -0.69
CACNA1C-223	ENST00000465278	ZNF454	Q8N9F8	522 aa		10.74	□□□□□ -0.69
CACNA1C-223	ENST00000465278	FOSB	P53539	338 aa		10.73	□□□□□ -0.69
CACNA1C-223	ENST00000465278	TYW1B	Q6NUM6	668 aa		10.73	□□□□□ -0.69
CACNA1C-223	ENST00000465278	GPR37	O15354	613 aa		10.72	□□□□□ -0.69
CACNA1C-223	ENST00000465278	FECH	P22830	423 aa		10.71	□□□□□ -0.69
CACNA1C-223	ENST00000465278	EN1	Q05925	392 aa	Predicted RBP	10.71	□□□□□ -0.69
CACNA1C-223	ENST00000465278	TSR1	Q2NL82	804 aa	Known RBP	10.71	□□□□□ -0.69
CACNA1C-223	ENST00000465278	JPH4	Q96JJ6	628 aa		10.71	□□□□□ -0.69
CACNA1C-223	ENST00000465278	CDHR5	Q9HBB8	845 aa		10.71	□□□□□ -0.69
CACNA1C-223	ENST00000465278	FCHSD2	O94868	740 aa		10.7	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms