RNA–Protein interactions for RNA: ENST00000464612.5

SNHG12-204, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best)

Gene SNHG12, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-204ENST00000464612 APLP2Q06481 763 aa14.1□□□□□ -0.15
SNHG12-204ENST00000464612 NCOA2Q15596 1464 aa14.1□□□□□ -0.15
SNHG12-204ENST00000464612 ARAP3Q8WWN8 1544 aa14.1□□□□□ -0.15
SNHG12-204ENST00000464612 GPATCH8Q9UKJ3 1502 aaKnown RBP14.1□□□□□ -0.15
SNHG12-204ENST00000464612 SUPT6HQ7KZ85 1726 aaKnown RBP14.1□□□□□ -0.15
SNHG12-204ENST00000464612 CFAP74Q9C0B2 1584 aa14.09□□□□□ -0.15
SNHG12-204ENST00000464612 AKNAQ7Z591 1439 aa14.09□□□□□ -0.15
SNHG12-204ENST00000464612 CCNB3Q8WWL7 1395 aa14.08□□□□□ -0.16
SNHG12-204ENST00000464612 ADGRL1O94910 1474 aa14.06□□□□□ -0.16
SNHG12-204ENST00000464612 EFCAB2Q5VUJ9 269 aa14.06□□□□□ -0.16
SNHG12-204ENST00000464612 PHLDB1Q86UU1 1377 aa14.06□□□□□ -0.16
SNHG12-204ENST00000464612 RAPGEF3O95398 923 aa14.05□□□□□ -0.16
SNHG12-204ENST00000464612 FRMPD1Q5SYB0 1578 aa14.05□□□□□ -0.16
SNHG12-204ENST00000464612 ZNF777Q9ULD5 760 aaPredicted RBP14.04□□□□□ -0.16
SNHG12-204ENST00000464612 SCAPERQ9BY12 1400 aa14.04□□□□□ -0.16
SNHG12-204ENST00000464612 SAMD9LQ8IVG5 1584 aa14.04□□□□□ -0.16
SNHG12-204ENST00000464612 ITSN2Q9NZM3 1697 aa14.04□□□□□ -0.16
SNHG12-204ENST00000464612 PLPPR3Q6T4P5 718 aa14.03□□□□□ -0.16
SNHG12-204ENST00000464612 CFDP1Q9UEE9 299 aaPredicted RBP14.03□□□□□ -0.16
SNHG12-204ENST00000464612 DENND4BO75064 1496 aaPredicted RBP14.03□□□□□ -0.16
SNHG12-204ENST00000464612 ABCC1P33527 1531 aa14.02□□□□□ -0.16
SNHG12-204ENST00000464612 PPARGC1BQ86YN6 1023 aaKnown RBP14.02□□□□□ -0.17
SNHG12-204ENST00000464612 RICTORQ6R327 1708 aa14.01□□□□□ -0.17
SNHG12-204ENST00000464612 ARHGEF12Q9NZN5 1544 aa14.01□□□□□ -0.17
SNHG12-204ENST00000464612 POGZQ7Z3K3 1410 aa14□□□□□ -0.17
SNHG12-204ENST00000464612 ZNF644Q9H582 1327 aaPredicted RBP14□□□□□ -0.17
SNHG12-204ENST00000464612 SYCP2Q9BX26 1530 aa14□□□□□ -0.17
SNHG12-204ENST00000464612 MYOM3Q5VTT5 1437 aa13.98□□□□□ -0.17
SNHG12-204ENST00000464612 TRAPPC8Q9Y2L5 1435 aa13.98□□□□□ -0.17
SNHG12-204ENST00000464612 FOXD1Q16676 465 aa13.98□□□□□ -0.17
SNHG12-204ENST00000464612 CAMSAP2Q08AD1 1489 aa13.97□□□□□ -0.17
SNHG12-204ENST00000464612 ZMYM4Q5VZL5 1548 aa13.96□□□□□ -0.17
SNHG12-204ENST00000464612 ZNF518AQ6AHZ1 1483 aa13.96□□□□□ -0.17
SNHG12-204ENST00000464612 HNRNPMP52272 730 aaKnown RBP eCLIP13.96□□□□□ -0.17
SNHG12-204ENST00000464612 AFAP1Q8N556 730 aa13.96□□□□□ -0.17
SNHG12-204ENST00000464612 KDM5CP41229 1560 aa13.95□□□□□ -0.18
SNHG12-204ENST00000464612 PLEKHH2Q8IVE3 1493 aa13.94□□□□□ -0.18
SNHG12-204ENST00000464612 YEATS2Q9ULM3 1422 aa13.94□□□□□ -0.18
SNHG12-204ENST00000464612 KIAA1107Q9UPP5 1409 aa13.94□□□□□ -0.18
SNHG12-204ENST00000464612 MBD5Q9P267 1494 aa13.93□□□□□ -0.18
SNHG12-204ENST00000464612 MIA2Q96PC5 1412 aa13.93□□□□□ -0.18
SNHG12-204ENST00000464612 FGD6Q6ZV73 1430 aa13.92□□□□□ -0.18
SNHG12-204ENST00000464612 ZFYVE16Q7Z3T8 1539 aa13.92□□□□□ -0.18
SNHG12-204ENST00000464612 ARHGEF40Q8TER5 1519 aa13.92□□□□□ -0.18
SNHG12-204ENST00000464612 HECW2Q9P2P5 1572 aa13.92□□□□□ -0.18
SNHG12-204ENST00000464612 PTPN23Q9H3S7 1636 aa13.91□□□□□ -0.18
SNHG12-204ENST00000464612 MAGI2Q86UL8 1455 aa13.89□□□□□ -0.19
SNHG12-204ENST00000464612 MYT1LQ9UL68 1186 aa13.89□□□□□ -0.19
SNHG12-204ENST00000464612 TCOF1Q13428 1488 aaKnown RBP13.88□□□□□ -0.19
SNHG12-204ENST00000464612 CCDC141Q6ZP82 1450 aa13.88□□□□□ -0.19
SNHG12-204ENST00000464612 MLH3Q9UHC1 1453 aa13.88□□□□□ -0.19
SNHG12-204ENST00000464612 ABCA6Q8N139 1617 aa13.88□□□□□ -0.19
SNHG12-204ENST00000464612 KIDINS220Q9ULH0 1771 aa13.88□□□□□ -0.19
SNHG12-204ENST00000464612 ARHGEF5Q12774 1597 aa13.88□□□□□ -0.19
SNHG12-204ENST00000464612 INO80Q9ULG1 1556 aaPredicted RBP13.88□□□□□ -0.19
SNHG12-204ENST00000464612 DIP2CQ9Y2E4 1556 aa13.88□□□□□ -0.19
SNHG12-204ENST00000464612 SPAG9O60271 1321 aaKnown RBP13.87□□□□□ -0.19
SNHG12-204ENST00000464612 SIGLEC1Q9BZZ2 1709 aa13.87□□□□□ -0.19
SNHG12-204ENST00000464612 ATP7AQ04656 1500 aa13.86□□□□□ -0.19
SNHG12-204ENST00000464612 FAM50AQ14320 339 aaKnown RBP13.84□□□□□ -0.19
SNHG12-204ENST00000464612 ATP10AO60312 1499 aa13.84□□□□□ -0.19
SNHG12-204ENST00000464612 C9orf84Q5VXU9 1444 aa13.83□□□□□ -0.2
SNHG12-204ENST00000464612 ABCC5O15440 1437 aa13.82□□□□□ -0.2
SNHG12-204ENST00000464612 DNMT1P26358 1616 aaKnown RBP13.82□□□□□ -0.2
SNHG12-204ENST00000464612 CROCC2H7BZ55 1655 aa13.82□□□□□ -0.2
SNHG12-204ENST00000464612 DAPK1P53355 1430 aa13.81□□□□□ -0.2
SNHG12-204ENST00000464612 RSPH4AQ5TD94 716 aa13.81□□□□□ -0.2
SNHG12-204ENST00000464612 ARID4BQ4LE39 1312 aaPredicted RBP13.81□□□□□ -0.2
SNHG12-204ENST00000464612 RTEL1-TNFRSF6BF6WH68 1400 aa13.81□□□□□ -0.2
SNHG12-204ENST00000464612 REREQ9P2R6 1566 aa13.79□□□□□ -0.2
SNHG12-204ENST00000464612 MAST1Q9Y2H9 1570 aa13.79□□□□□ -0.2
SNHG12-204ENST00000464612 KDM4FA0A1W2PPD8 638 aa13.79□□□□□ -0.2
SNHG12-204ENST00000464612 TSPY4P0CV99 314 aa13.79□□□□□ -0.2
SNHG12-204ENST00000464612 TSPY10P0CW01 314 aa13.79□□□□□ -0.2
SNHG12-204ENST00000464612 ADGBQ8N7X0 1667 aa13.79□□□□□ -0.2
SNHG12-204ENST00000464612 RRBP1Q9P2E9 1410 aaKnown RBP13.78□□□□□ -0.2
SNHG12-204ENST00000464612 SHANK2Q9UPX8 1470 aa13.78□□□□□ -0.2
SNHG12-204ENST00000464612 PLXNC1O60486 1568 aa13.77□□□□□ -0.21
SNHG12-204ENST00000464612 A2MP01023 1474 aa13.77□□□□□ -0.21
SNHG12-204ENST00000464612 MLECQ14165 292 aa13.77□□□□□ -0.21
SNHG12-204ENST00000464612 BCORL1Q5H9F3 1711 aa13.77□□□□□ -0.21
SNHG12-204ENST00000464612 PTPRKQ15262 1439 aa13.76□□□□□ -0.21
SNHG12-204ENST00000464612 CHIC2Q9UKJ5 165 aa13.76□□□□□ -0.21
SNHG12-204ENST00000464612 AGLP35573 1532 aa13.74□□□□□ -0.21
SNHG12-204ENST00000464612 ITGAEP38570 1179 aa13.74□□□□□ -0.21
SNHG12-204ENST00000464612 ADAMTSL3P82987 1691 aa13.74□□□□□ -0.21
SNHG12-204ENST00000464612 DHX29Q7Z478 1369 aaKnown RBP13.73□□□□□ -0.21
SNHG12-204ENST00000464612 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.73□□□□□ -0.212e-7■□□□□ 9.2
SNHG12-204ENST00000464612 MADDQ8WXG6 1647 aa13.73□□□□□ -0.21
SNHG12-204ENST00000464612 RRP7BPQ9NSQ0 103 aa13.72□□□□□ -0.21
SNHG12-204ENST00000464612 KIF15Q9NS87 1388 aa13.71□□□□□ -0.21
SNHG12-204ENST00000464612 ADGRL2O95490 1459 aa13.71□□□□□ -0.21
SNHG12-204ENST00000464612 NCOA1Q15788 1441 aa13.7□□□□□ -0.22
SNHG12-204ENST00000464612 ANKRD30AQ9BXX3 1397 aa13.7□□□□□ -0.22
SNHG12-204ENST00000464612 RIMS1Q86UR5 1692 aaKnown RBP13.69□□□□□ -0.22
SNHG12-204ENST00000464612 DUOX2Q9NRD8 1548 aa13.69□□□□□ -0.22
SNHG12-204ENST00000464612 FER1L4A9Z1Z3 1794 aa13.68□□□□□ -0.22
SNHG12-204ENST00000464612 KIF3BO15066 747 aa13.68□□□□□ -0.22
SNHG12-204ENST00000464612 GGT6Q6P531 493 aa13.67□□□□□ -0.22
SNHG12-204ENST00000464612 PTPRMP28827 1452 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms