RNA–Protein interactions for RNA: ENST00000464304.1

HMG20B-208, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-208ENST00000464304 ARAP3Q8WWN8 1544 aa29.51■■■□□ 2.32
HMG20B-208ENST00000464304 NEO1Q92859 1461 aa29.5■■■□□ 2.31
HMG20B-208ENST00000464304 FANCAO15360 1455 aa29.49■■■□□ 2.31
HMG20B-208ENST00000464304 ARHGAP5Q13017 1502 aa29.46■■■□□ 2.31
HMG20B-208ENST00000464304 APLP2Q06481 763 aa29.46■■■□□ 2.31
HMG20B-208ENST00000464304 KANK4Q5T7N3 995 aaPredicted RBP29.45■■■□□ 2.31
HMG20B-208ENST00000464304 ITSN2Q9NZM3 1697 aa29.44■■■□□ 2.3
HMG20B-208ENST00000464304 NCOA2Q15596 1464 aa29.43■■■□□ 2.3
HMG20B-208ENST00000464304 PHLDB1Q86UU1 1377 aa29.42■■■□□ 2.3
HMG20B-208ENST00000464304 GPATCH8Q9UKJ3 1502 aaKnown RBP29.42■■■□□ 2.3
HMG20B-208ENST00000464304 AKNAQ7Z591 1439 aa29.42■■■□□ 2.3
HMG20B-208ENST00000464304 CCNB3Q8WWL7 1395 aa29.39■■■□□ 2.29
HMG20B-208ENST00000464304 RICTORQ6R327 1708 aa29.37■■■□□ 2.29
HMG20B-208ENST00000464304 EFCAB2Q5VUJ9 269 aa29.37■■■□□ 2.29
HMG20B-208ENST00000464304 FRMPD1Q5SYB0 1578 aa29.35■■■□□ 2.29
HMG20B-208ENST00000464304 SAMD9LQ8IVG5 1584 aa29.33■■■□□ 2.29
HMG20B-208ENST00000464304 ABCC1P33527 1531 aa29.3■■■□□ 2.28
HMG20B-208ENST00000464304 DENND4BO75064 1496 aaPredicted RBP29.29■■■□□ 2.28
HMG20B-208ENST00000464304 SCAPERQ9BY12 1400 aa29.28■■■□□ 2.28
HMG20B-208ENST00000464304 RAPGEF3O95398 923 aa29.26■■■□□ 2.27
HMG20B-208ENST00000464304 CFDP1Q9UEE9 299 aaPredicted RBP29.26■■■□□ 2.27
HMG20B-208ENST00000464304 ZNF777Q9ULD5 760 aaPredicted RBP29.24■■■□□ 2.27
HMG20B-208ENST00000464304 ARHGEF12Q9NZN5 1544 aa29.24■■■□□ 2.27
HMG20B-208ENST00000464304 POGZQ7Z3K3 1410 aa29.23■■■□□ 2.27
HMG20B-208ENST00000464304 SYCP2Q9BX26 1530 aa29.21■■■□□ 2.27
HMG20B-208ENST00000464304 ZMYM4Q5VZL5 1548 aa29.2■■■□□ 2.26
HMG20B-208ENST00000464304 MYOM3Q5VTT5 1437 aa29.2■■■□□ 2.26
HMG20B-208ENST00000464304 KDM5CP41229 1560 aa29.17■■■□□ 2.26
HMG20B-208ENST00000464304 PLEKHH2Q8IVE3 1493 aa29.17■■■□□ 2.26
HMG20B-208ENST00000464304 CAMSAP2Q08AD1 1489 aa29.16■■■□□ 2.26
HMG20B-208ENST00000464304 ZNF518AQ6AHZ1 1483 aa29.16■■■□□ 2.26
HMG20B-208ENST00000464304 TRAPPC8Q9Y2L5 1435 aa29.15■■■□□ 2.26
HMG20B-208ENST00000464304 ZNF644Q9H582 1327 aaPredicted RBP29.15■■■□□ 2.26
HMG20B-208ENST00000464304 KIAA1107Q9UPP5 1409 aa29.13■■■□□ 2.25
HMG20B-208ENST00000464304 PPARGC1BQ86YN6 1023 aaKnown RBP29.12■■■□□ 2.25
HMG20B-208ENST00000464304 MIA2Q96PC5 1412 aa29.11■■■□□ 2.25
HMG20B-208ENST00000464304 ARHGEF40Q8TER5 1519 aa29.11■■■□□ 2.25
HMG20B-208ENST00000464304 AFAP1Q8N556 730 aa29.1■■■□□ 2.25
HMG20B-208ENST00000464304 PTPN23Q9H3S7 1636 aa29.09■■■□□ 2.25
HMG20B-208ENST00000464304 HNRNPMP52272 730 aaKnown RBP eCLIP29.09■■■□□ 2.25
HMG20B-208ENST00000464304 ZFYVE16Q7Z3T8 1539 aa29.09■■■□□ 2.25
HMG20B-208ENST00000464304 MBD5Q9P267 1494 aa29.07■■■□□ 2.24
HMG20B-208ENST00000464304 KIDINS220Q9ULH0 1771 aa29.06■■■□□ 2.24
HMG20B-208ENST00000464304 MAGI2Q86UL8 1455 aa29.06■■■□□ 2.24
HMG20B-208ENST00000464304 FGD6Q6ZV73 1430 aa29.05■■■□□ 2.24
HMG20B-208ENST00000464304 YEATS2Q9ULM3 1422 aa29.05■■■□□ 2.24
HMG20B-208ENST00000464304 ADAMTSL3P82987 1691 aa29.05■■■□□ 2.24
HMG20B-208ENST00000464304 ARHGEF5Q12774 1597 aa29.03■■■□□ 2.24
HMG20B-208ENST00000464304 MLH3Q9UHC1 1453 aa29.02■■■□□ 2.24
HMG20B-208ENST00000464304 ABCA6Q8N139 1617 aa29.02■■■□□ 2.24
HMG20B-208ENST00000464304 INO80Q9ULG1 1556 aaPredicted RBP29.01■■■□□ 2.23
HMG20B-208ENST00000464304 TCOF1Q13428 1488 aaKnown RBP28.99■■■□□ 2.23
HMG20B-208ENST00000464304 CCDC141Q6ZP82 1450 aa28.99■■■□□ 2.23
HMG20B-208ENST00000464304 DIP2CQ9Y2E4 1556 aa28.99■■■□□ 2.23
HMG20B-208ENST00000464304 SIGLEC1Q9BZZ2 1709 aa28.98■■■□□ 2.23
HMG20B-208ENST00000464304 PTPRMP28827 1452 aa28.97■■■□□ 2.23
HMG20B-208ENST00000464304 ATP7AQ04656 1500 aa28.97■■■□□ 2.23
HMG20B-208ENST00000464304 MYT1LQ9UL68 1186 aa28.95■■■□□ 2.22
HMG20B-208ENST00000464304 CROCC2H7BZ55 1655 aa28.95■■■□□ 2.22
HMG20B-208ENST00000464304 FBXO41Q8TF61 875 aa28.94■■■□□ 2.22
HMG20B-208ENST00000464304 SPAG9O60271 1321 aaKnown RBP28.94■■■□□ 2.22
HMG20B-208ENST00000464304 DNMT1P26358 1616 aaKnown RBP28.92■■■□□ 2.22
HMG20B-208ENST00000464304 BCORL1Q5H9F3 1711 aa28.91■■■□□ 2.22
HMG20B-208ENST00000464304 ATP10AO60312 1499 aa28.91■■■□□ 2.22
HMG20B-208ENST00000464304 MADDQ8WXG6 1647 aa28.91■■■□□ 2.22
HMG20B-208ENST00000464304 RSPH4AQ5TD94 716 aa28.9■■■□□ 2.22
HMG20B-208ENST00000464304 ADGBQ8N7X0 1667 aa28.89■■■□□ 2.22
HMG20B-208ENST00000464304 C9orf84Q5VXU9 1444 aa28.89■■■□□ 2.22
HMG20B-208ENST00000464304 MAST1Q9Y2H9 1570 aa28.88■■■□□ 2.21
HMG20B-208ENST00000464304 REREQ9P2R6 1566 aa28.88■■■□□ 2.21
HMG20B-208ENST00000464304 RTEL1-TNFRSF6BF6WH68 1400 aa28.86■■■□□ 2.21
HMG20B-208ENST00000464304 ABCC5O15440 1437 aa28.84■■■□□ 2.21
HMG20B-208ENST00000464304 DAPK1P53355 1430 aa28.84■■■□□ 2.21
HMG20B-208ENST00000464304 FAM50AQ14320 339 aaKnown RBP28.83■■■□□ 2.21
HMG20B-208ENST00000464304 RIMS1Q86UR5 1692 aaKnown RBP28.81■■■□□ 2.2
HMG20B-208ENST00000464304 LMTK3Q96Q04 1460 aa28.81■■■□□ 2.2
HMG20B-208ENST00000464304 SHANK2Q9UPX8 1470 aa28.8■■■□□ 2.2
HMG20B-208ENST00000464304 TSPY4P0CV99 314 aa28.8■■■□□ 2.2
HMG20B-208ENST00000464304 TSPY10P0CW01 314 aa28.8■■■□□ 2.2
HMG20B-208ENST00000464304 ARID4BQ4LE39 1312 aaPredicted RBP28.79■■■□□ 2.2
HMG20B-208ENST00000464304 PLXNC1O60486 1568 aa28.79■■■□□ 2.2
HMG20B-208ENST00000464304 RRBP1Q9P2E9 1410 aaKnown RBP28.77■■■□□ 2.2
HMG20B-208ENST00000464304 A2MP01023 1474 aa28.76■■■□□ 2.19
HMG20B-208ENST00000464304 AGLP35573 1532 aa28.75■■■□□ 2.19
HMG20B-208ENST00000464304 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.72■■■□□ 2.193e-7■■■□□ 14.6
HMG20B-208ENST00000464304 FER1L4A9Z1Z3 1794 aa28.7■■■□□ 2.19
HMG20B-208ENST00000464304 HSPA2P54652 639 aa28.66■■■□□ 2.18
HMG20B-208ENST00000464304 MLECQ14165 292 aa28.66■■■□□ 2.18
HMG20B-208ENST00000464304 CHIC2Q9UKJ5 165 aa28.66■■■□□ 2.18
HMG20B-208ENST00000464304 PTPRKQ15262 1439 aa28.66■■■□□ 2.18
HMG20B-208ENST00000464304 DHX29Q7Z478 1369 aaKnown RBP28.65■■■□□ 2.18
HMG20B-208ENST00000464304 ADGRL2O95490 1459 aa28.65■■■□□ 2.18
HMG20B-208ENST00000464304 PLPPR3Q6T4P5 718 aa28.63■■■□□ 2.17
HMG20B-208ENST00000464304 DUOX2Q9NRD8 1548 aa28.63■■■□□ 2.17
HMG20B-208ENST00000464304 EIF2AK4Q9P2K8 1649 aaKnown RBP28.61■■■□□ 2.17
HMG20B-208ENST00000464304 ANKRD30AQ9BXX3 1397 aa28.61■■■□□ 2.17
HMG20B-208ENST00000464304 KIF15Q9NS87 1388 aa28.61■■■□□ 2.17
HMG20B-208ENST00000464304 ITGAEP38570 1179 aa28.6■■■□□ 2.17
HMG20B-208ENST00000464304 NCOA1Q15788 1441 aa28.6■■■□□ 2.17
HMG20B-208ENST00000464304 RRP7BPQ9NSQ0 103 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms