RNA–Protein interactions for RNA: ENST00000464290.5

CRAT-208, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 3

Gene CRAT, Length 867 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-208ENST00000464290 PTPN23Q9H3S7 1636 aa23.27■■□□□ 1.32
CRAT-208ENST00000464290 CD109Q6YHK3 1445 aa23.26■■□□□ 1.31
CRAT-208ENST00000464290 FAM50AQ14320 339 aaKnown RBP23.26■■□□□ 1.31
CRAT-208ENST00000464290 TCOF1Q13428 1488 aaKnown RBP23.25■■□□□ 1.31
CRAT-208ENST00000464290 ZNF777Q9ULD5 760 aaPredicted RBP23.25■■□□□ 1.31
CRAT-208ENST00000464290 ARHGAP5Q13017 1502 aa23.24■■□□□ 1.31
CRAT-208ENST00000464290 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.24■■□□□ 1.31
CRAT-208ENST00000464290 ARAP3Q8WWN8 1544 aa23.23■■□□□ 1.31
CRAT-208ENST00000464290 EFCAB2Q5VUJ9 269 aa23.22■■□□□ 1.31
CRAT-208ENST00000464290 PCGF6Q9BYE7 350 aa23.22■■□□□ 1.31
CRAT-208ENST00000464290 MAP3K4Q9Y6R4 1608 aa23.22■■□□□ 1.31
CRAT-208ENST00000464290 KIF13AQ9H1H9 1805 aa23.21■■□□□ 1.31
CRAT-208ENST00000464290 CAMSAP2Q08AD1 1489 aa23.2■■□□□ 1.3
CRAT-208ENST00000464290 SAMD9LQ8IVG5 1584 aa23.18■■□□□ 1.3
CRAT-208ENST00000464290 FANCAO15360 1455 aa23.17■■□□□ 1.3
CRAT-208ENST00000464290 ITGAEP38570 1179 aa23.14■■□□□ 1.29
CRAT-208ENST00000464290 HNRNPMP52272 730 aaKnown RBP eCLIP23.13■■□□□ 1.29
CRAT-208ENST00000464290 MBD5Q9P267 1494 aa23.11■■□□□ 1.29
CRAT-208ENST00000464290 AKNAQ7Z591 1439 aa23.11■■□□□ 1.29
CRAT-208ENST00000464290 KIAA1107Q9UPP5 1409 aa23.11■■□□□ 1.29
CRAT-208ENST00000464290 ARHGEF12Q9NZN5 1544 aa23.11■■□□□ 1.29
CRAT-208ENST00000464290 PLEKHH2Q8IVE3 1493 aa23.11■■□□□ 1.29
CRAT-208ENST00000464290 PPRC1Q5VV67 1664 aaKnown RBP23.1■■□□□ 1.29
CRAT-208ENST00000464290 ABCC5O15440 1437 aa23.1■■□□□ 1.29
CRAT-208ENST00000464290 PTPRKQ15262 1439 aa23.1■■□□□ 1.29
CRAT-208ENST00000464290 TRHP20396 242 aaPredicted RBP23.1■■□□□ 1.29
CRAT-208ENST00000464290 TSPOAP1O95153 1857 aa23.1■■□□□ 1.29
CRAT-208ENST00000464290 ABCC1P33527 1531 aa23.09■■□□□ 1.29
CRAT-208ENST00000464290 SYCP2Q9BX26 1530 aa23.08■■□□□ 1.29
CRAT-208ENST00000464290 NEO1Q92859 1461 aa23.08■■□□□ 1.29
CRAT-208ENST00000464290 DAPK1P53355 1430 aa23.08■■□□□ 1.28
CRAT-208ENST00000464290 DNMT1P26358 1616 aaKnown RBP23.07■■□□□ 1.28
CRAT-208ENST00000464290 CFAP74Q9C0B2 1584 aa23.06■■□□□ 1.28
CRAT-208ENST00000464290 ARHGEF5Q12774 1597 aa23.06■■□□□ 1.28
CRAT-208ENST00000464290 ADGRL1O94910 1474 aa23.05■■□□□ 1.28
CRAT-208ENST00000464290 SCAPERQ9BY12 1400 aa23.05■■□□□ 1.28
CRAT-208ENST00000464290 RSPH4AQ5TD94 716 aa23.04■■□□□ 1.28
CRAT-208ENST00000464290 TEX14Q8IWB6 1497 aa23.04■■□□□ 1.28
CRAT-208ENST00000464290 TRAPPC8Q9Y2L5 1435 aa23.03■■□□□ 1.28
CRAT-208ENST00000464290 CCDC141Q6ZP82 1450 aa23.02■■□□□ 1.28
CRAT-208ENST00000464290 CHIC2Q9UKJ5 165 aa23.01■■□□□ 1.27
CRAT-208ENST00000464290 AFAP1Q8N556 730 aa23■■□□□ 1.27
CRAT-208ENST00000464290 TSPY4P0CV99 314 aa22.98■■□□□ 1.27
CRAT-208ENST00000464290 TSPY10P0CW01 314 aa22.98■■□□□ 1.27
CRAT-208ENST00000464290 CROCC2H7BZ55 1655 aa22.97■■□□□ 1.27
CRAT-208ENST00000464290 C9orf84Q5VXU9 1444 aa22.96■■□□□ 1.27
CRAT-208ENST00000464290 SHANK2Q9UPX8 1470 aa22.96■■□□□ 1.27
CRAT-208ENST00000464290 DENND4BO75064 1496 aaPredicted RBP22.95■■□□□ 1.26
CRAT-208ENST00000464290 POGZQ7Z3K3 1410 aa22.94■■□□□ 1.26
CRAT-208ENST00000464290 ROCK1Q13464 1354 aa22.93■■□□□ 1.26
CRAT-208ENST00000464290 RAPGEF3O95398 923 aa22.93■■□□□ 1.26
CRAT-208ENST00000464290 RRP7BPQ9NSQ0 103 aa22.92■■□□□ 1.26
CRAT-208ENST00000464290 MAST1Q9Y2H9 1570 aa22.92■■□□□ 1.26
CRAT-208ENST00000464290 ADGRL2O95490 1459 aa22.92■■□□□ 1.26
CRAT-208ENST00000464290 NCOA1Q15788 1441 aa22.91■■□□□ 1.26
CRAT-208ENST00000464290 SPAG9O60271 1321 aaKnown RBP22.91■■□□□ 1.26
CRAT-208ENST00000464290 ZNF518AQ6AHZ1 1483 aa22.91■■□□□ 1.26
CRAT-208ENST00000464290 COL17A1Q9UMD9 1497 aaPredicted RBP22.9■■□□□ 1.26
CRAT-208ENST00000464290 ADGBQ8N7X0 1667 aa22.88■■□□□ 1.25
CRAT-208ENST00000464290 HFM1A2PYH4 1435 aa22.88■■□□□ 1.25
CRAT-208ENST00000464290 NAIPQ13075 1403 aa22.88■■□□□ 1.25
CRAT-208ENST00000464290 KDM5CP41229 1560 aa22.88■■□□□ 1.25
CRAT-208ENST00000464290 RICTORQ6R327 1708 aa22.88■■□□□ 1.25
CRAT-208ENST00000464290 ANKRD30AQ9BXX3 1397 aa22.88■■□□□ 1.25
CRAT-208ENST00000464290 FRMPD1Q5SYB0 1578 aa22.86■■□□□ 1.25
CRAT-208ENST00000464290 RTEL1-TNFRSF6BF6WH68 1400 aa22.86■■□□□ 1.25
CRAT-208ENST00000464290 SETD5Q9C0A6 1442 aa22.86■■□□□ 1.25
CRAT-208ENST00000464290 ZFYVE16Q7Z3T8 1539 aa22.85■■□□□ 1.25
CRAT-208ENST00000464290 MLH3Q9UHC1 1453 aa22.84■■□□□ 1.25
CRAT-208ENST00000464290 INO80Q9ULG1 1556 aaPredicted RBP22.84■■□□□ 1.25
CRAT-208ENST00000464290 ATP7AQ04656 1500 aa22.82■■□□□ 1.24
CRAT-208ENST00000464290 KIF15Q9NS87 1388 aa22.82■■□□□ 1.24
CRAT-208ENST00000464290 RAB3GAP2Q9H2M9 1393 aa22.81■■□□□ 1.24
CRAT-208ENST00000464290 MYT1LQ9UL68 1186 aa22.81■■□□□ 1.24
CRAT-208ENST00000464290 KIDINS220Q9ULH0 1771 aa22.81■■□□□ 1.24
CRAT-208ENST00000464290 PLXNC1O60486 1568 aa22.8■■□□□ 1.24
CRAT-208ENST00000464290 GCC2Q8IWJ2 1684 aa22.79■■□□□ 1.24
CRAT-208ENST00000464290 HECW2Q9P2P5 1572 aa22.79■■□□□ 1.24
CRAT-208ENST00000464290 ZMYM4Q5VZL5 1548 aa22.78■■□□□ 1.24
CRAT-208ENST00000464290 KDM6BO15054 1643 aa22.77■■□□□ 1.24
CRAT-208ENST00000464290 HRCP23327 699 aa22.75■■□□□ 1.23
CRAT-208ENST00000464290 ANKRD50Q9ULJ7 1429 aa22.74■■□□□ 1.23
CRAT-208ENST00000464290 YEATS2Q9ULM3 1422 aa22.74■■□□□ 1.23
CRAT-208ENST00000464290 MAGI2Q86UL8 1455 aa22.73■■□□□ 1.23
CRAT-208ENST00000464290 DUOX2Q9NRD8 1548 aa22.73■■□□□ 1.23
CRAT-208ENST00000464290 ABCA6Q8N139 1617 aa22.72■■□□□ 1.23
CRAT-208ENST00000464290 DHX29Q7Z478 1369 aaKnown RBP22.7■■□□□ 1.22
CRAT-208ENST00000464290 DIP2CQ9Y2E4 1556 aa22.7■■□□□ 1.22
CRAT-208ENST00000464290 A2MP01023 1474 aa22.68■■□□□ 1.22
CRAT-208ENST00000464290 ERBINQ96RT1 1412 aa22.67■■□□□ 1.22
CRAT-208ENST00000464290 ATP10AO60312 1499 aa22.64■■□□□ 1.21
CRAT-208ENST00000464290 ARHGEF40Q8TER5 1519 aa22.62■■□□□ 1.21
CRAT-208ENST00000464290 TRIM52Q96A61 297 aa22.61■■□□□ 1.21
CRAT-208ENST00000464290 KIF3BO15066 747 aa22.6■■□□□ 1.21
CRAT-208ENST00000464290 ACIN1Q9UKV3 1341 aaKnown RBP22.59■■□□□ 1.21
CRAT-208ENST00000464290 EIF2AK4Q9P2K8 1649 aaKnown RBP22.57■■□□□ 1.2
CRAT-208ENST00000464290 DHX57Q6P158 1386 aaKnown RBP22.57■■□□□ 1.2
CRAT-208ENST00000464290 REREQ9P2R6 1566 aa22.57■■□□□ 1.2
CRAT-208ENST00000464290 NUP155O75694 1391 aa22.56■■□□□ 1.2
CRAT-208ENST00000464290 UNC13BO14795 1591 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms