RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 PTPRKQ15262 1439 aa21.55■■□□□ 1.04
COL5A1-205ENST00000464187 CAMSAP2Q08AD1 1489 aa21.54■■□□□ 1.04
COL5A1-205ENST00000464187 PREX2Q70Z35 1606 aa21.52■■□□□ 1.03
COL5A1-205ENST00000464187 PLCH2O75038 1416 aa21.5■■□□□ 1.03
COL5A1-205ENST00000464187 CDC42BPBQ9Y5S2 1711 aa21.49■■□□□ 1.03
COL5A1-205ENST00000464187 ARHGAP5Q13017 1502 aa21.48■■□□□ 1.03
COL5A1-205ENST00000464187 DAPK1P53355 1430 aa21.48■■□□□ 1.03
COL5A1-205ENST00000464187 ABCC5O15440 1437 aa21.47■■□□□ 1.03
COL5A1-205ENST00000464187 MYO5CQ9NQX4 1742 aa21.47■■□□□ 1.03
COL5A1-205ENST00000464187 MAPKBP1O60336 1514 aa21.47■■□□□ 1.03
COL5A1-205ENST00000464187 CHIC2Q9UKJ5 165 aa21.46■■□□□ 1.03
COL5A1-205ENST00000464187 DNMT1P26358 1616 aaKnown RBP21.45■■□□□ 1.03
COL5A1-205ENST00000464187 SETD5Q9C0A6 1442 aa21.45■■□□□ 1.02
COL5A1-205ENST00000464187 ABCA9Q8IUA7 1624 aa21.45■■□□□ 1.02
COL5A1-205ENST00000464187 DHX57Q6P158 1386 aaKnown RBP21.44■■□□□ 1.02
COL5A1-205ENST00000464187 SAMD9LQ8IVG5 1584 aa21.43■■□□□ 1.02
COL5A1-205ENST00000464187 EFCAB2Q5VUJ9 269 aa21.43■■□□□ 1.02
COL5A1-205ENST00000464187 RAB3GAP2Q9H2M9 1393 aa21.43■■□□□ 1.02
COL5A1-205ENST00000464187 HNRNPMP52272 730 aaKnown RBP eCLIP21.42■■□□□ 1.02
COL5A1-205ENST00000464187 HFM1A2PYH4 1435 aa21.42■■□□□ 1.02
COL5A1-205ENST00000464187 ARAP3Q8WWN8 1544 aa21.41■■□□□ 1.02
COL5A1-205ENST00000464187 MBD5Q9P267 1494 aa21.4■■□□□ 1.02
COL5A1-205ENST00000464187 RRP7BPQ9NSQ0 103 aa21.39■■□□□ 1.02
COL5A1-205ENST00000464187 NAIPQ13075 1403 aa21.38■■□□□ 1.01
COL5A1-205ENST00000464187 AKNAQ7Z591 1439 aa21.38■■□□□ 1.01
COL5A1-205ENST00000464187 PLEKHH2Q8IVE3 1493 aa21.37■■□□□ 1.01
COL5A1-205ENST00000464187 KIAA1107Q9UPP5 1409 aa21.37■■□□□ 1.01
COL5A1-205ENST00000464187 ROCK1Q13464 1354 aa21.37■■□□□ 1.01
COL5A1-205ENST00000464187 CLSPNQ9HAW4 1339 aa21.37■■□□□ 1.01
COL5A1-205ENST00000464187 RSPH4AQ5TD94 716 aa21.37■■□□□ 1.01
COL5A1-205ENST00000464187 SYCP2Q9BX26 1530 aa21.36■■□□□ 1.01
COL5A1-205ENST00000464187 CD109Q6YHK3 1445 aa21.36■■□□□ 1.01
COL5A1-205ENST00000464187 ARHGEF5Q12774 1597 aa21.36■■□□□ 1.01
COL5A1-205ENST00000464187 FANCAO15360 1455 aa21.35■■□□□ 1.01
COL5A1-205ENST00000464187 TSPY4P0CV99 314 aa21.35■■□□□ 1.01
COL5A1-205ENST00000464187 TSPY10P0CW01 314 aa21.35■■□□□ 1.01
COL5A1-205ENST00000464187 CCDC141Q6ZP82 1450 aa21.34■■□□□ 1.01
COL5A1-205ENST00000464187 SHANK2Q9UPX8 1470 aa21.32■■□□□ 1
COL5A1-205ENST00000464187 ARHGEF12Q9NZN5 1544 aa21.32■■□□□ 1
COL5A1-205ENST00000464187 CROCC2H7BZ55 1655 aa21.32■■□□□ 1
COL5A1-205ENST00000464187 NCOA1Q15788 1441 aa21.32■■□□□ 1
COL5A1-205ENST00000464187 C9orf84Q5VXU9 1444 aa21.32■■□□□ 1
COL5A1-205ENST00000464187 ABCC1P33527 1531 aa21.31■■□□□ 1
COL5A1-205ENST00000464187 ADGRL2O95490 1459 aa21.3■■□□□ 1
COL5A1-205ENST00000464187 ANKRD30AQ9BXX3 1397 aa21.29■■□□□ 1
COL5A1-205ENST00000464187 ZNF316A6NFI3 1004 aaPredicted RBP21.28■■□□□ 1
COL5A1-205ENST00000464187 FAM69CQ0P6D2 419 aa21.28■■□□□ 1
COL5A1-205ENST00000464187 GCC2Q8IWJ2 1684 aa21.27■■□□□ 1
COL5A1-205ENST00000464187 GLI2P10070 1586 aa21.27■■□□□ 1
COL5A1-205ENST00000464187 DIEXFQ68CQ4 756 aaKnown RBP21.27■□□□□ 0.99
COL5A1-205ENST00000464187 TRAPPC8Q9Y2L5 1435 aa21.26■□□□□ 0.99
COL5A1-205ENST00000464187 ADGRL1O94910 1474 aa21.26■□□□□ 0.99
COL5A1-205ENST00000464187 DIP2BQ9P265 1576 aa21.25■□□□□ 0.99
COL5A1-205ENST00000464187 ADGBQ8N7X0 1667 aa21.25■□□□□ 0.99
COL5A1-205ENST00000464187 SCAPERQ9BY12 1400 aa21.24■□□□□ 0.99
COL5A1-205ENST00000464187 DNAJC5Q9H3Z4 198 aa21.24■□□□□ 0.99
COL5A1-205ENST00000464187 MAP3K4Q9Y6R4 1608 aa21.23■□□□□ 0.99
COL5A1-205ENST00000464187 AFAP1Q8N556 730 aa21.22■□□□□ 0.99
COL5A1-205ENST00000464187 KDM6BO15054 1643 aa21.21■□□□□ 0.99
COL5A1-205ENST00000464187 MAST1Q9Y2H9 1570 aa21.21■□□□□ 0.99
COL5A1-205ENST00000464187 KIF15Q9NS87 1388 aa21.2■□□□□ 0.98
COL5A1-205ENST00000464187 CFAP74Q9C0B2 1584 aa21.2■□□□□ 0.98
COL5A1-205ENST00000464187 NEO1Q92859 1461 aa21.18■□□□□ 0.98
COL5A1-205ENST00000464187 ANKRD50Q9ULJ7 1429 aa21.18■□□□□ 0.98
COL5A1-205ENST00000464187 SPAG9O60271 1321 aaKnown RBP21.17■□□□□ 0.98
COL5A1-205ENST00000464187 TRIM52Q96A61 297 aa21.15■□□□□ 0.98
COL5A1-205ENST00000464187 ACIN1Q9UKV3 1341 aaKnown RBP21.14■□□□□ 0.98
COL5A1-205ENST00000464187 RTEL1-TNFRSF6BF6WH68 1400 aa21.14■□□□□ 0.97
COL5A1-205ENST00000464187 ZNF518AQ6AHZ1 1483 aa21.13■□□□□ 0.97
COL5A1-205ENST00000464187 PLXNC1O60486 1568 aa21.12■□□□□ 0.97
COL5A1-205ENST00000464187 POGZQ7Z3K3 1410 aa21.12■□□□□ 0.97
COL5A1-205ENST00000464187 ZFYVE16Q7Z3T8 1539 aa21.11■□□□□ 0.97
COL5A1-205ENST00000464187 MYT1LQ9UL68 1186 aa21.08■□□□□ 0.97
COL5A1-205ENST00000464187 DENND4BO75064 1496 aaPredicted RBP21.08■□□□□ 0.97
COL5A1-205ENST00000464187 KIF13AQ9H1H9 1805 aa21.08■□□□□ 0.97
COL5A1-205ENST00000464187 TEX14Q8IWB6 1497 aa21.08■□□□□ 0.96
COL5A1-205ENST00000464187 ATP7AQ04656 1500 aa21.07■□□□□ 0.96
COL5A1-205ENST00000464187 RAPGEF3O95398 923 aa21.07■□□□□ 0.96
COL5A1-205ENST00000464187 DUOX2Q9NRD8 1548 aa21.07■□□□□ 0.96
COL5A1-205ENST00000464187 INO80Q9ULG1 1556 aaPredicted RBP21.07■□□□□ 0.96
COL5A1-205ENST00000464187 MPHOSPH9Q99550 1183 aa21.06■□□□□ 0.96
COL5A1-205ENST00000464187 TSPOAP1O95153 1857 aa21.06■□□□□ 0.96
COL5A1-205ENST00000464187 PPRC1Q5VV67 1664 aaKnown RBP21.05■□□□□ 0.96
COL5A1-205ENST00000464187 KDM5CP41229 1560 aa21.05■□□□□ 0.96
COL5A1-205ENST00000464187 ERBINQ96RT1 1412 aa21.04■□□□□ 0.96
COL5A1-205ENST00000464187 SLC4A1APQ9BWU0 796 aaKnown RBP21.02■□□□□ 0.96
COL5A1-205ENST00000464187 MLH3Q9UHC1 1453 aa21.02■□□□□ 0.96
COL5A1-205ENST00000464187 NUP155O75694 1391 aa21.01■□□□□ 0.95
COL5A1-205ENST00000464187 KIDINS220Q9ULH0 1771 aa21■□□□□ 0.95
COL5A1-205ENST00000464187 PZPP20742 1482 aa20.99■□□□□ 0.95
COL5A1-205ENST00000464187 HECW2Q9P2P5 1572 aa20.98■□□□□ 0.95
COL5A1-205ENST00000464187 RICTORQ6R327 1708 aa20.97■□□□□ 0.95
COL5A1-205ENST00000464187 DHX29Q7Z478 1369 aaKnown RBP20.97■□□□□ 0.95
COL5A1-205ENST00000464187 SIN3AQ96ST3 1273 aa20.97■□□□□ 0.95
COL5A1-205ENST00000464187 KDM5DQ9BY66 1539 aa20.96■□□□□ 0.95
COL5A1-205ENST00000464187 FOXD1Q16676 465 aa20.95■□□□□ 0.94
COL5A1-205ENST00000464187 TRHP20396 242 aaPredicted RBP20.94■□□□□ 0.94
COL5A1-205ENST00000464187 FRMPD1Q5SYB0 1578 aa20.94■□□□□ 0.94
COL5A1-205ENST00000464187 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.94■□□□□ 0.94
COL5A1-205ENST00000464187 NEUROD1Q13562 356 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms