RNA–Protein interactions for RNA: ENST00000464119.1

SREBF2-206, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-206ENST00000464119 KANK4Q5T7N3 995 aaPredicted RBP18.4■□□□□ 0.54
SREBF2-206ENST00000464119 KDM6BO15054 1643 aa18.4■□□□□ 0.54
SREBF2-206ENST00000464119 CDC42BPBQ9Y5S2 1711 aa18.4■□□□□ 0.54
SREBF2-206ENST00000464119 COL17A1Q9UMD9 1497 aaPredicted RBP18.39■□□□□ 0.53
SREBF2-206ENST00000464119 APLP2Q06481 763 aa18.38■□□□□ 0.53
SREBF2-206ENST00000464119 NCOA2Q15596 1464 aa18.38■□□□□ 0.53
SREBF2-206ENST00000464119 GPATCH8Q9UKJ3 1502 aaKnown RBP18.38■□□□□ 0.53
SREBF2-206ENST00000464119 ARHGAP5Q13017 1502 aa18.36■□□□□ 0.53
SREBF2-206ENST00000464119 AKNAQ7Z591 1439 aa18.36■□□□□ 0.53
SREBF2-206ENST00000464119 CCNB3Q8WWL7 1395 aa18.34■□□□□ 0.53
SREBF2-206ENST00000464119 EFCAB2Q5VUJ9 269 aa18.34■□□□□ 0.53
SREBF2-206ENST00000464119 ITSN2Q9NZM3 1697 aa18.33■□□□□ 0.52
SREBF2-206ENST00000464119 ADGRL1O94910 1474 aa18.3■□□□□ 0.52
SREBF2-206ENST00000464119 FRMPD1Q5SYB0 1578 aa18.3■□□□□ 0.52
SREBF2-206ENST00000464119 PPARGC1BQ86YN6 1023 aaKnown RBP18.29■□□□□ 0.52
SREBF2-206ENST00000464119 SAMD9LQ8IVG5 1584 aa18.29■□□□□ 0.52
SREBF2-206ENST00000464119 ABCC1P33527 1531 aa18.28■□□□□ 0.52
SREBF2-206ENST00000464119 RICTORQ6R327 1708 aa18.28■□□□□ 0.52
SREBF2-206ENST00000464119 DENND4BO75064 1496 aaPredicted RBP18.27■□□□□ 0.52
SREBF2-206ENST00000464119 CFDP1Q9UEE9 299 aaPredicted RBP18.27■□□□□ 0.52
SREBF2-206ENST00000464119 SCAPERQ9BY12 1400 aa18.26■□□□□ 0.51
SREBF2-206ENST00000464119 POGZQ7Z3K3 1410 aa18.25■□□□□ 0.51
SREBF2-206ENST00000464119 ARHGEF12Q9NZN5 1544 aa18.25■□□□□ 0.51
SREBF2-206ENST00000464119 MYOM3Q5VTT5 1437 aa18.24■□□□□ 0.51
SREBF2-206ENST00000464119 KIAA1107Q9UPP5 1409 aa18.23■□□□□ 0.51
SREBF2-206ENST00000464119 PLEKHH2Q8IVE3 1493 aa18.23■□□□□ 0.51
SREBF2-206ENST00000464119 RAPGEF3O95398 923 aa18.23■□□□□ 0.51
SREBF2-206ENST00000464119 ZMYM4Q5VZL5 1548 aa18.23■□□□□ 0.51
SREBF2-206ENST00000464119 MIA2Q96PC5 1412 aa18.23■□□□□ 0.51
SREBF2-206ENST00000464119 KDM5CP41229 1560 aa18.21■□□□□ 0.51
SREBF2-206ENST00000464119 ZNF518AQ6AHZ1 1483 aa18.2■□□□□ 0.5
SREBF2-206ENST00000464119 SYCP2Q9BX26 1530 aa18.2■□□□□ 0.5
SREBF2-206ENST00000464119 ZNF777Q9ULD5 760 aaPredicted RBP18.2■□□□□ 0.5
SREBF2-206ENST00000464119 ZNF644Q9H582 1327 aaPredicted RBP18.2■□□□□ 0.5
SREBF2-206ENST00000464119 CAMSAP2Q08AD1 1489 aa18.19■□□□□ 0.5
SREBF2-206ENST00000464119 MBD5Q9P267 1494 aa18.19■□□□□ 0.5
SREBF2-206ENST00000464119 TRAPPC8Q9Y2L5 1435 aa18.18■□□□□ 0.5
SREBF2-206ENST00000464119 FGD6Q6ZV73 1430 aa18.16■□□□□ 0.5
SREBF2-206ENST00000464119 MAGI2Q86UL8 1455 aa18.16■□□□□ 0.5
SREBF2-206ENST00000464119 HNRNPMP52272 730 aaKnown RBP eCLIP18.15■□□□□ 0.5
SREBF2-206ENST00000464119 AFAP1Q8N556 730 aa18.15■□□□□ 0.5
SREBF2-206ENST00000464119 PTPN23Q9H3S7 1636 aa18.15■□□□□ 0.5
SREBF2-206ENST00000464119 TCOF1Q13428 1488 aaKnown RBP18.14■□□□□ 0.5
SREBF2-206ENST00000464119 ARHGEF5Q12774 1597 aa18.14■□□□□ 0.49
SREBF2-206ENST00000464119 RRBP1Q9P2E9 1410 aaKnown RBP18.14■□□□□ 0.49
SREBF2-206ENST00000464119 MLH3Q9UHC1 1453 aa18.14■□□□□ 0.49
SREBF2-206ENST00000464119 ARHGEF40Q8TER5 1519 aa18.13■□□□□ 0.49
SREBF2-206ENST00000464119 ZFYVE16Q7Z3T8 1539 aa18.13■□□□□ 0.49
SREBF2-206ENST00000464119 HECW2Q9P2P5 1572 aa18.13■□□□□ 0.49
SREBF2-206ENST00000464119 CCDC141Q6ZP82 1450 aa18.1■□□□□ 0.49
SREBF2-206ENST00000464119 YEATS2Q9ULM3 1422 aa18.1■□□□□ 0.49
SREBF2-206ENST00000464119 KIDINS220Q9ULH0 1771 aa18.09■□□□□ 0.49
SREBF2-206ENST00000464119 INO80Q9ULG1 1556 aaPredicted RBP18.09■□□□□ 0.49
SREBF2-206ENST00000464119 RSPH4AQ5TD94 716 aa18.09■□□□□ 0.49
SREBF2-206ENST00000464119 DIP2CQ9Y2E4 1556 aa18.07■□□□□ 0.48
SREBF2-206ENST00000464119 ABCA6Q8N139 1617 aa18.06■□□□□ 0.48
SREBF2-206ENST00000464119 ATP7AQ04656 1500 aa18.06■□□□□ 0.48
SREBF2-206ENST00000464119 RTEL1-TNFRSF6BF6WH68 1400 aa18.06■□□□□ 0.48
SREBF2-206ENST00000464119 SPAG9O60271 1321 aaKnown RBP18.05■□□□□ 0.48
SREBF2-206ENST00000464119 DNMT1P26358 1616 aaKnown RBP18.05■□□□□ 0.48
SREBF2-206ENST00000464119 REREQ9P2R6 1566 aa18.04■□□□□ 0.48
SREBF2-206ENST00000464119 MAST1Q9Y2H9 1570 aa18.04■□□□□ 0.48
SREBF2-206ENST00000464119 CROCC2H7BZ55 1655 aa18.04■□□□□ 0.48
SREBF2-206ENST00000464119 ATP10AO60312 1499 aa18.04■□□□□ 0.48
SREBF2-206ENST00000464119 ABCC5O15440 1437 aa18.03■□□□□ 0.48
SREBF2-206ENST00000464119 C9orf84Q5VXU9 1444 aa18.03■□□□□ 0.48
SREBF2-206ENST00000464119 SIGLEC1Q9BZZ2 1709 aa18.03■□□□□ 0.48
SREBF2-206ENST00000464119 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.03■□□□□ 0.48
SREBF2-206ENST00000464119 SHANK2Q9UPX8 1470 aa18.02■□□□□ 0.48
SREBF2-206ENST00000464119 DAPK1P53355 1430 aa18.02■□□□□ 0.48
SREBF2-206ENST00000464119 CCER1Q8TC90 406 aaPredicted RBP18.01■□□□□ 0.47
SREBF2-206ENST00000464119 TSPY4P0CV99 314 aa17.99■□□□□ 0.47
SREBF2-206ENST00000464119 TSPY10P0CW01 314 aa17.99■□□□□ 0.47
SREBF2-206ENST00000464119 ADGBQ8N7X0 1667 aa17.99■□□□□ 0.47
SREBF2-206ENST00000464119 MYT1LQ9UL68 1186 aa17.98■□□□□ 0.47
SREBF2-206ENST00000464119 PLXNC1O60486 1568 aa17.97■□□□□ 0.47
SREBF2-206ENST00000464119 FAM50AQ14320 339 aaKnown RBP17.97■□□□□ 0.47
SREBF2-206ENST00000464119 AGLP35573 1532 aa17.97■□□□□ 0.47
SREBF2-206ENST00000464119 A2MP01023 1474 aa17.95■□□□□ 0.46
SREBF2-206ENST00000464119 BCORL1Q5H9F3 1711 aa17.94■□□□□ 0.46
SREBF2-206ENST00000464119 ADGRL2O95490 1459 aa17.93■□□□□ 0.46
SREBF2-206ENST00000464119 DHX29Q7Z478 1369 aaKnown RBP17.92■□□□□ 0.46
SREBF2-206ENST00000464119 PTPRKQ15262 1439 aa17.92■□□□□ 0.46
SREBF2-206ENST00000464119 CLSPNQ9HAW4 1339 aa17.92■□□□□ 0.46
SREBF2-206ENST00000464119 ADAMTSL3P82987 1691 aa17.91■□□□□ 0.46
SREBF2-206ENST00000464119 NCOA1Q15788 1441 aa17.89■□□□□ 0.46
SREBF2-206ENST00000464119 KDM4FA0A1W2PPD8 638 aa17.89■□□□□ 0.45
SREBF2-206ENST00000464119 ARID4BQ4LE39 1312 aaPredicted RBP17.89■□□□□ 0.45
SREBF2-206ENST00000464119 DUOX2Q9NRD8 1548 aa17.88■□□□□ 0.45
SREBF2-206ENST00000464119 ANKRD30AQ9BXX3 1397 aa17.88■□□□□ 0.45
SREBF2-206ENST00000464119 ROCK1Q13464 1354 aa17.87■□□□□ 0.45
SREBF2-206ENST00000464119 KIF15Q9NS87 1388 aa17.86■□□□□ 0.45
SREBF2-206ENST00000464119 EIF2AK4Q9P2K8 1649 aaKnown RBP17.86■□□□□ 0.45
SREBF2-206ENST00000464119 CHIC2Q9UKJ5 165 aa17.85■□□□□ 0.45
SREBF2-206ENST00000464119 MADDQ8WXG6 1647 aa17.83■□□□□ 0.45
SREBF2-206ENST00000464119 ERBINQ96RT1 1412 aa17.83■□□□□ 0.45
SREBF2-206ENST00000464119 RRP7BPQ9NSQ0 103 aa17.83■□□□□ 0.44
SREBF2-206ENST00000464119 RNF17Q9BXT8 1623 aaKnown RBP17.81■□□□□ 0.44
SREBF2-206ENST00000464119 FER1L4A9Z1Z3 1794 aa17.81■□□□□ 0.44
SREBF2-206ENST00000464119 ITGAEP38570 1179 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms