RNA–Protein interactions for RNA: ENST00000464045.1

THUMPD3-208, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-208ENST00000464045 RAPGEF3O95398 923 aa11.88□□□□□ -0.51
THUMPD3-208ENST00000464045 EFCAB2Q5VUJ9 269 aa11.87□□□□□ -0.51
THUMPD3-208ENST00000464045 DENND4BO75064 1496 aaPredicted RBP11.87□□□□□ -0.51
THUMPD3-208ENST00000464045 PLPPR3Q6T4P5 718 aa11.86□□□□□ -0.51
THUMPD3-208ENST00000464045 MYO5CQ9NQX4 1742 aa11.86□□□□□ -0.51
THUMPD3-208ENST00000464045 ARID4BQ4LE39 1312 aaPredicted RBP11.86□□□□□ -0.51
THUMPD3-208ENST00000464045 VPS8Q8N3P4 1428 aa11.85□□□□□ -0.51
THUMPD3-208ENST00000464045 FRMPD1Q5SYB0 1578 aa11.84□□□□□ -0.51
THUMPD3-208ENST00000464045 MTUS2Q5JR59 1369 aa11.83□□□□□ -0.52
THUMPD3-208ENST00000464045 ARHGAP5Q13017 1502 aa11.83□□□□□ -0.52
THUMPD3-208ENST00000464045 MAGI2Q86UL8 1455 aa11.83□□□□□ -0.52
THUMPD3-208ENST00000464045 ZMYM4Q5VZL5 1548 aa11.82□□□□□ -0.52
THUMPD3-208ENST00000464045 POGZQ7Z3K3 1410 aa11.82□□□□□ -0.52
THUMPD3-208ENST00000464045 SCAPERQ9BY12 1400 aa11.82□□□□□ -0.52
THUMPD3-208ENST00000464045 EHBP1L1Q8N3D4 1523 aa11.81□□□□□ -0.52
THUMPD3-208ENST00000464045 RICTORQ6R327 1708 aa11.81□□□□□ -0.52
THUMPD3-208ENST00000464045 PREX2Q70Z35 1606 aa11.81□□□□□ -0.52
THUMPD3-208ENST00000464045 ARHGEF40Q8TER5 1519 aa11.8□□□□□ -0.52
THUMPD3-208ENST00000464045 ZNF518AQ6AHZ1 1483 aa11.79□□□□□ -0.52
THUMPD3-208ENST00000464045 MAP3K1Q13233 1512 aa11.79□□□□□ -0.52
THUMPD3-208ENST00000464045 GPATCH8Q9UKJ3 1502 aaKnown RBP11.79□□□□□ -0.52
THUMPD3-208ENST00000464045 CCNB3Q8WWL7 1395 aa11.78□□□□□ -0.52
THUMPD3-208ENST00000464045 CDC42BPBQ9Y5S2 1711 aa11.77□□□□□ -0.52
THUMPD3-208ENST00000464045 PTPRMP28827 1452 aa11.77□□□□□ -0.52
THUMPD3-208ENST00000464045 TIAM1Q13009 1591 aa11.77□□□□□ -0.53
THUMPD3-208ENST00000464045 ABCC1P33527 1531 aa11.76□□□□□ -0.53
THUMPD3-208ENST00000464045 ZFYVE16Q7Z3T8 1539 aa11.76□□□□□ -0.53
THUMPD3-208ENST00000464045 KDM5CP41229 1560 aa11.76□□□□□ -0.53
THUMPD3-208ENST00000464045 MLECQ14165 292 aa11.76□□□□□ -0.53
THUMPD3-208ENST00000464045 CDC42BPAQ5VT25 1732 aa11.76□□□□□ -0.53
THUMPD3-208ENST00000464045 PLEKHH2Q8IVE3 1493 aa11.76□□□□□ -0.53
THUMPD3-208ENST00000464045 MADDQ8WXG6 1647 aa11.75□□□□□ -0.53
THUMPD3-208ENST00000464045 ADAMTSL3P82987 1691 aa11.75□□□□□ -0.53
THUMPD3-208ENST00000464045 KIAA1107Q9UPP5 1409 aa11.75□□□□□ -0.53
THUMPD3-208ENST00000464045 CFDP1Q9UEE9 299 aaPredicted RBP11.74□□□□□ -0.53
THUMPD3-208ENST00000464045 LRRC9Q6ZRR7 1453 aa11.74□□□□□ -0.53
THUMPD3-208ENST00000464045 HSPA2P54652 639 aa11.73□□□□□ -0.53
THUMPD3-208ENST00000464045 BCORL1Q5H9F3 1711 aa11.73□□□□□ -0.53
THUMPD3-208ENST00000464045 RIMS1Q86UR5 1692 aaKnown RBP11.73□□□□□ -0.53
THUMPD3-208ENST00000464045 ARHGEF12Q9NZN5 1544 aa11.73□□□□□ -0.53
THUMPD3-208ENST00000464045 MLH3Q9UHC1 1453 aa11.73□□□□□ -0.53
THUMPD3-208ENST00000464045 YEATS2Q9ULM3 1422 aa11.73□□□□□ -0.53
THUMPD3-208ENST00000464045 SUPT6HQ7KZ85 1726 aaKnown RBP11.72□□□□□ -0.53
THUMPD3-208ENST00000464045 ITSN2Q9NZM3 1697 aa11.72□□□□□ -0.53
THUMPD3-208ENST00000464045 ATP10AO60312 1499 aa11.72□□□□□ -0.53
THUMPD3-208ENST00000464045 NCOA2Q15596 1464 aa11.72□□□□□ -0.53
THUMPD3-208ENST00000464045 AFAP1Q8N556 730 aa11.72□□□□□ -0.53
THUMPD3-208ENST00000464045 SAMD9LQ8IVG5 1584 aa11.71□□□□□ -0.53
THUMPD3-208ENST00000464045 C9orf84Q5VXU9 1444 aa11.71□□□□□ -0.53
THUMPD3-208ENST00000464045 TRAPPC8Q9Y2L5 1435 aa11.71□□□□□ -0.53
THUMPD3-208ENST00000464045 ZNF777Q9ULD5 760 aaPredicted RBP11.7□□□□□ -0.54
THUMPD3-208ENST00000464045 SYCP2Q9BX26 1530 aa11.7□□□□□ -0.54
THUMPD3-208ENST00000464045 APLP2Q06481 763 aa11.69□□□□□ -0.54
THUMPD3-208ENST00000464045 FBXO41Q8TF61 875 aa11.69□□□□□ -0.54
THUMPD3-208ENST00000464045 REREQ9P2R6 1566 aa11.69□□□□□ -0.54
THUMPD3-208ENST00000464045 SIGLEC1Q9BZZ2 1709 aa11.68□□□□□ -0.54
THUMPD3-208ENST00000464045 HNRNPMP52272 730 aaKnown RBP eCLIP11.67□□□□□ -0.54
THUMPD3-208ENST00000464045 KANK4Q5T7N3 995 aaPredicted RBP11.67□□□□□ -0.54
THUMPD3-208ENST00000464045 LMTK3Q96Q04 1460 aa11.67□□□□□ -0.54
THUMPD3-208ENST00000464045 DIP2CQ9Y2E4 1556 aa11.67□□□□□ -0.54
THUMPD3-208ENST00000464045 SPAG9O60271 1321 aaKnown RBP11.66□□□□□ -0.54
THUMPD3-208ENST00000464045 MBD5Q9P267 1494 aa11.66□□□□□ -0.54
THUMPD3-208ENST00000464045 RSPH4AQ5TD94 716 aa11.66□□□□□ -0.54
THUMPD3-208ENST00000464045 MYT1LQ9UL68 1186 aa11.66□□□□□ -0.54
THUMPD3-208ENST00000464045 MIA2Q96PC5 1412 aa11.65□□□□□ -0.54
THUMPD3-208ENST00000464045 AGLP35573 1532 aa11.65□□□□□ -0.55
THUMPD3-208ENST00000464045 KIDINS220Q9ULH0 1771 aa11.64□□□□□ -0.55
THUMPD3-208ENST00000464045 ABCA6Q8N139 1617 aa11.64□□□□□ -0.55
THUMPD3-208ENST00000464045 CAMSAP2Q08AD1 1489 aa11.64□□□□□ -0.55
THUMPD3-208ENST00000464045 RTEL1-TNFRSF6BF6WH68 1400 aa11.64□□□□□ -0.55
THUMPD3-208ENST00000464045 ZNF644Q9H582 1327 aaPredicted RBP11.63□□□□□ -0.55
THUMPD3-208ENST00000464045 INO80Q9ULG1 1556 aaPredicted RBP11.63□□□□□ -0.55
THUMPD3-208ENST00000464045 MYOM3Q5VTT5 1437 aa11.63□□□□□ -0.55
THUMPD3-208ENST00000464045 CEBPAP49715 358 aaPredicted RBP11.63□□□□□ -0.55
THUMPD3-208ENST00000464045 ATP7AQ04656 1500 aa11.63□□□□□ -0.55
THUMPD3-208ENST00000464045 CCDC141Q6ZP82 1450 aa11.63□□□□□ -0.55
THUMPD3-208ENST00000464045 FER1L4A9Z1Z3 1794 aa11.62□□□□□ -0.55
THUMPD3-208ENST00000464045 ARHGEF5Q12774 1597 aa11.61□□□□□ -0.55
THUMPD3-208ENST00000464045 A2MP01023 1474 aa11.59□□□□□ -0.55
THUMPD3-208ENST00000464045 PLXNC1O60486 1568 aa11.58□□□□□ -0.55
THUMPD3-208ENST00000464045 TSPY4P0CV99 314 aa11.58□□□□□ -0.56
THUMPD3-208ENST00000464045 TSPY10P0CW01 314 aa11.58□□□□□ -0.56
THUMPD3-208ENST00000464045 CACNB1Q02641 598 aaPredicted RBP11.57□□□□□ -0.56
THUMPD3-208ENST00000464045 ADGBQ8N7X0 1667 aa11.56□□□□□ -0.56
THUMPD3-208ENST00000464045 FGD6Q6ZV73 1430 aa11.56□□□□□ -0.56
THUMPD3-208ENST00000464045 CNTLNQ9NXG0 1405 aa11.56□□□□□ -0.56
THUMPD3-208ENST00000464045 DHX29Q7Z478 1369 aaKnown RBP11.55□□□□□ -0.56
THUMPD3-208ENST00000464045 MAST1Q9Y2H9 1570 aa11.55□□□□□ -0.56
THUMPD3-208ENST00000464045 CERKQ8TCT0 537 aa11.55□□□□□ -0.56
THUMPD3-208ENST00000464045 ESF1Q9H501 851 aaKnown RBP11.55□□□□□ -0.56
THUMPD3-208ENST00000464045 PPP6R1Q9UPN7 881 aa11.55□□□□□ -0.56
THUMPD3-208ENST00000464045 TCOF1Q13428 1488 aaKnown RBP11.55□□□□□ -0.56
THUMPD3-208ENST00000464045 PTPN23Q9H3S7 1636 aa11.53□□□□□ -0.56
THUMPD3-208ENST00000464045 SHANK2Q9UPX8 1470 aa11.53□□□□□ -0.56
THUMPD3-208ENST00000464045 FAM135AQ9P2D6 1515 aa11.51□□□□□ -0.57
THUMPD3-208ENST00000464045 ABCC5O15440 1437 aa11.51□□□□□ -0.57
THUMPD3-208ENST00000464045 PREX1Q8TCU6 1659 aa11.5□□□□□ -0.57
THUMPD3-208ENST00000464045 DAPK1P53355 1430 aa11.5□□□□□ -0.57
THUMPD3-208ENST00000464045 MROH2AA6NES4 1674 aa11.49□□□□□ -0.57
THUMPD3-208ENST00000464045 DNMT1P26358 1616 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms