RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 ARHGAP5Q13017 1502 aa21.32■■□□□ 1
COMMD3-205ENST00000463688 ZNF518AQ6AHZ1 1483 aa21.3■■□□□ 1
COMMD3-205ENST00000463688 MYT1LQ9UL68 1186 aa21.29■■□□□ 1
COMMD3-205ENST00000463688 MYO5CQ9NQX4 1742 aa21.28■■□□□ 1
COMMD3-205ENST00000463688 ZMYM4Q5VZL5 1548 aa21.27■■□□□ 1
COMMD3-205ENST00000463688 CCNB3Q8WWL7 1395 aa21.26■□□□□ 0.99
COMMD3-205ENST00000463688 CFDP1Q9UEE9 299 aaPredicted RBP21.25■□□□□ 0.99
COMMD3-205ENST00000463688 PLEKHH2Q8IVE3 1493 aa21.24■□□□□ 0.99
COMMD3-205ENST00000463688 ZFYVE16Q7Z3T8 1539 aa21.24■□□□□ 0.99
COMMD3-205ENST00000463688 ARHGEF40Q8TER5 1519 aa21.23■□□□□ 0.99
COMMD3-205ENST00000463688 FRMPD1Q5SYB0 1578 aa21.22■□□□□ 0.99
COMMD3-205ENST00000463688 LOC105371045A0A1W2PR82 267 aa21.21■□□□□ 0.99
COMMD3-205ENST00000463688 RICTORQ6R327 1708 aa21.21■□□□□ 0.99
COMMD3-205ENST00000463688 ATP10AO60312 1499 aa21.21■□□□□ 0.99
COMMD3-205ENST00000463688 APLP2Q06481 763 aa21.21■□□□□ 0.99
COMMD3-205ENST00000463688 AFAP1Q8N556 730 aa21.2■□□□□ 0.98
COMMD3-205ENST00000463688 ZNF777Q9ULD5 760 aaPredicted RBP21.19■□□□□ 0.98
COMMD3-205ENST00000463688 VPS8Q8N3P4 1428 aa21.18■□□□□ 0.98
COMMD3-205ENST00000463688 KIAA1107Q9UPP5 1409 aa21.18■□□□□ 0.98
COMMD3-205ENST00000463688 RSPH4AQ5TD94 716 aa21.18■□□□□ 0.98
COMMD3-205ENST00000463688 C9orf84Q5VXU9 1444 aa21.17■□□□□ 0.98
COMMD3-205ENST00000463688 GPATCH8Q9UKJ3 1502 aaKnown RBP21.17■□□□□ 0.98
COMMD3-205ENST00000463688 EHBP1L1Q8N3D4 1523 aa21.16■□□□□ 0.98
COMMD3-205ENST00000463688 MLH3Q9UHC1 1453 aa21.16■□□□□ 0.98
COMMD3-205ENST00000463688 PREX2Q70Z35 1606 aa21.15■□□□□ 0.98
COMMD3-205ENST00000463688 LRRIQ1Q96JM4 1722 aa21.14■□□□□ 0.97
COMMD3-205ENST00000463688 ESF1Q9H501 851 aaKnown RBP21.13■□□□□ 0.97
COMMD3-205ENST00000463688 YEATS2Q9ULM3 1422 aa21.13■□□□□ 0.97
COMMD3-205ENST00000463688 SPAG9O60271 1321 aaKnown RBP21.12■□□□□ 0.97
COMMD3-205ENST00000463688 KDM5CP41229 1560 aa21.11■□□□□ 0.97
COMMD3-205ENST00000463688 ABCC1P33527 1531 aa21.11■□□□□ 0.97
COMMD3-205ENST00000463688 PTPRMP28827 1452 aa21.11■□□□□ 0.97
COMMD3-205ENST00000463688 MAP3K1Q13233 1512 aa21.1■□□□□ 0.97
COMMD3-205ENST00000463688 ADAMTSL3P82987 1691 aa21.08■□□□□ 0.96
COMMD3-205ENST00000463688 CDC42BPBQ9Y5S2 1711 aa21.08■□□□□ 0.96
COMMD3-205ENST00000463688 TRAPPC8Q9Y2L5 1435 aa21.07■□□□□ 0.96
COMMD3-205ENST00000463688 HECW2Q9P2P5 1572 aa21.07■□□□□ 0.96
COMMD3-205ENST00000463688 BCORL1Q5H9F3 1711 aa21.07■□□□□ 0.96
COMMD3-205ENST00000463688 HNRNPMP52272 730 aaKnown RBP eCLIP21.06■□□□□ 0.96
COMMD3-205ENST00000463688 MLECQ14165 292 aa21.05■□□□□ 0.96
COMMD3-205ENST00000463688 REREQ9P2R6 1566 aa21.04■□□□□ 0.96
COMMD3-205ENST00000463688 CDC42BPAQ5VT25 1732 aa21.03■□□□□ 0.96
COMMD3-205ENST00000463688 TSPY4P0CV99 314 aa21.02■□□□□ 0.96
COMMD3-205ENST00000463688 TSPY10P0CW01 314 aa21.02■□□□□ 0.96
COMMD3-205ENST00000463688 PPP6R1Q9UPN7 881 aa21.02■□□□□ 0.96
COMMD3-205ENST00000463688 AGLP35573 1532 aa21.01■□□□□ 0.95
COMMD3-205ENST00000463688 ARHGEF12Q9NZN5 1544 aa21.01■□□□□ 0.95
COMMD3-205ENST00000463688 TIAM1Q13009 1591 aa21.01■□□□□ 0.95
COMMD3-205ENST00000463688 NCOA2Q15596 1464 aa21.01■□□□□ 0.95
COMMD3-205ENST00000463688 LRRC9Q6ZRR7 1453 aa21.01■□□□□ 0.95
COMMD3-205ENST00000463688 ITSN2Q9NZM3 1697 aa21■□□□□ 0.95
COMMD3-205ENST00000463688 SUPT6HQ7KZ85 1726 aaKnown RBP21■□□□□ 0.95
COMMD3-205ENST00000463688 RTEL1-TNFRSF6BF6WH68 1400 aa20.99■□□□□ 0.95
COMMD3-205ENST00000463688 CNTLNQ9NXG0 1405 aa20.99■□□□□ 0.95
COMMD3-205ENST00000463688 SYCP2Q9BX26 1530 aa20.98■□□□□ 0.95
COMMD3-205ENST00000463688 SAMD9LQ8IVG5 1584 aa20.98■□□□□ 0.95
COMMD3-205ENST00000463688 MADDQ8WXG6 1647 aa20.96■□□□□ 0.95
COMMD3-205ENST00000463688 DIP2CQ9Y2E4 1556 aa20.95■□□□□ 0.94
COMMD3-205ENST00000463688 MIA2Q96PC5 1412 aa20.94■□□□□ 0.94
COMMD3-205ENST00000463688 ATP7AQ04656 1500 aa20.92■□□□□ 0.94
COMMD3-205ENST00000463688 CCDC141Q6ZP82 1450 aa20.91■□□□□ 0.94
COMMD3-205ENST00000463688 MBD5Q9P267 1494 aa20.91■□□□□ 0.94
COMMD3-205ENST00000463688 ZNF644Q9H582 1327 aaPredicted RBP20.91■□□□□ 0.94
COMMD3-205ENST00000463688 A2MP01023 1474 aa20.91■□□□□ 0.94
COMMD3-205ENST00000463688 PLPPR3Q6T4P5 718 aa20.88■□□□□ 0.93
COMMD3-205ENST00000463688 RIMS1Q86UR5 1692 aaKnown RBP20.88■□□□□ 0.93
COMMD3-205ENST00000463688 ABCA6Q8N139 1617 aa20.88■□□□□ 0.93
COMMD3-205ENST00000463688 KIDINS220Q9ULH0 1771 aa20.87■□□□□ 0.93
COMMD3-205ENST00000463688 KANK4Q5T7N3 995 aaPredicted RBP20.87■□□□□ 0.93
COMMD3-205ENST00000463688 MYOM3Q5VTT5 1437 aa20.87■□□□□ 0.93
COMMD3-205ENST00000463688 CAMSAP2Q08AD1 1489 aa20.87■□□□□ 0.93
COMMD3-205ENST00000463688 DHX29Q7Z478 1369 aaKnown RBP20.87■□□□□ 0.93
COMMD3-205ENST00000463688 FER1L4A9Z1Z3 1794 aa20.85■□□□□ 0.93
COMMD3-205ENST00000463688 DMRT2Q9Y5R5 561 aa20.85■□□□□ 0.93
COMMD3-205ENST00000463688 INO80Q9ULG1 1556 aaPredicted RBP20.83■□□□□ 0.93
COMMD3-205ENST00000463688 GGT6Q6P531 493 aa20.83■□□□□ 0.93
COMMD3-205ENST00000463688 ARHGEF5Q12774 1597 aa20.82■□□□□ 0.92
COMMD3-205ENST00000463688 UHRF1BP1Q6BDS2 1440 aa20.81■□□□□ 0.92
COMMD3-205ENST00000463688 LMTK3Q96Q04 1460 aa20.8■□□□□ 0.92
COMMD3-205ENST00000463688 CEBPAP49715 358 aaPredicted RBP20.79■□□□□ 0.92
COMMD3-205ENST00000463688 ZMYM3Q14202 1370 aa20.79■□□□□ 0.92
COMMD3-205ENST00000463688 NPATQ14207 1427 aa20.79■□□□□ 0.92
COMMD3-205ENST00000463688 SETD1BQ9UPS6 1966 aaKnown RBP20.79■□□□□ 0.92
COMMD3-205ENST00000463688 KIF3BO15066 747 aa20.78■□□□□ 0.92
COMMD3-205ENST00000463688 ADGBQ8N7X0 1667 aa20.78■□□□□ 0.92
COMMD3-205ENST00000463688 PLXNC1O60486 1568 aa20.77■□□□□ 0.92
COMMD3-205ENST00000463688 FAM135AQ9P2D6 1515 aa20.77■□□□□ 0.91
COMMD3-205ENST00000463688 SIGLEC1Q9BZZ2 1709 aa20.76■□□□□ 0.91
COMMD3-205ENST00000463688 WASHC2CQ9Y4E1 1318 aa20.74■□□□□ 0.91
COMMD3-205ENST00000463688 HSPA2P54652 639 aa20.7■□□□□ 0.9
COMMD3-205ENST00000463688 FGD6Q6ZV73 1430 aa20.69■□□□□ 0.9
COMMD3-205ENST00000463688 MAST1Q9Y2H9 1570 aa20.69■□□□□ 0.9
COMMD3-205ENST00000463688 MROH2AA6NES4 1674 aa20.69■□□□□ 0.9
COMMD3-205ENST00000463688 SHANK2Q9UPX8 1470 aa20.68■□□□□ 0.9
COMMD3-205ENST00000463688 PREX1Q8TCU6 1659 aa20.68■□□□□ 0.9
COMMD3-205ENST00000463688 ANKRD30AQ9BXX3 1397 aa20.67■□□□□ 0.9
COMMD3-205ENST00000463688 TCOF1Q13428 1488 aaKnown RBP20.65■□□□□ 0.9
COMMD3-205ENST00000463688 DUOX2Q9NRD8 1548 aa20.64■□□□□ 0.89
COMMD3-205ENST00000463688 KIF15Q9NS87 1388 aa20.63■□□□□ 0.89
COMMD3-205ENST00000463688 KDM5DQ9BY66 1539 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms