RNA–Protein interactions for RNA: ENST00000463685.1

ABCF3-204, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-204ENST00000463685 ARHGAP5Q13017 1502 aa22.96■■□□□ 1.27
ABCF3-204ENST00000463685 TRHP20396 242 aaPredicted RBP22.95■■□□□ 1.26
ABCF3-204ENST00000463685 MAP3K4Q9Y6R4 1608 aa22.95■■□□□ 1.26
ABCF3-204ENST00000463685 RRBP1Q9P2E9 1410 aaKnown RBP22.94■■□□□ 1.26
ABCF3-204ENST00000463685 FAM50AQ14320 339 aaKnown RBP22.94■■□□□ 1.26
ABCF3-204ENST00000463685 PTPN23Q9H3S7 1636 aa22.93■■□□□ 1.26
ABCF3-204ENST00000463685 MIA2Q96PC5 1412 aa22.92■■□□□ 1.26
ABCF3-204ENST00000463685 TSPOAP1O95153 1857 aa22.91■■□□□ 1.26
ABCF3-204ENST00000463685 EFCAB2Q5VUJ9 269 aa22.9■■□□□ 1.26
ABCF3-204ENST00000463685 FANCAO15360 1455 aa22.88■■□□□ 1.25
ABCF3-204ENST00000463685 CAMSAP2Q08AD1 1489 aa22.88■■□□□ 1.25
ABCF3-204ENST00000463685 TRIM26Q12899 539 aaPredicted RBP22.88■■□□□ 1.25
ABCF3-204ENST00000463685 SAMD9LQ8IVG5 1584 aa22.88■■□□□ 1.25
ABCF3-204ENST00000463685 ARAP3Q8WWN8 1544 aa22.87■■□□□ 1.25
ABCF3-204ENST00000463685 TCOF1Q13428 1488 aaKnown RBP22.87■■□□□ 1.25
ABCF3-204ENST00000463685 PPRC1Q5VV67 1664 aaKnown RBP22.86■■□□□ 1.25
ABCF3-204ENST00000463685 ITGAEP38570 1179 aa22.84■■□□□ 1.25
ABCF3-204ENST00000463685 HNRNPMP52272 730 aaKnown RBP eCLIP22.83■■□□□ 1.25
ABCF3-204ENST00000463685 AKNAQ7Z591 1439 aa22.82■■□□□ 1.24
ABCF3-204ENST00000463685 SYCP2Q9BX26 1530 aa22.8■■□□□ 1.24
ABCF3-204ENST00000463685 ARHGEF12Q9NZN5 1544 aa22.8■■□□□ 1.24
ABCF3-204ENST00000463685 ABCC1P33527 1531 aa22.79■■□□□ 1.24
ABCF3-204ENST00000463685 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.78■■□□□ 1.24
ABCF3-204ENST00000463685 CFAP74Q9C0B2 1584 aa22.78■■□□□ 1.24
ABCF3-204ENST00000463685 ADGRL1O94910 1474 aa22.78■■□□□ 1.24
ABCF3-204ENST00000463685 NEO1Q92859 1461 aa22.78■■□□□ 1.24
ABCF3-204ENST00000463685 TEX14Q8IWB6 1497 aa22.77■■□□□ 1.24
ABCF3-204ENST00000463685 SCAPERQ9BY12 1400 aa22.76■■□□□ 1.23
ABCF3-204ENST00000463685 PCGF6Q9BYE7 350 aa22.76■■□□□ 1.23
ABCF3-204ENST00000463685 PLEKHH2Q8IVE3 1493 aa22.76■■□□□ 1.23
ABCF3-204ENST00000463685 MBD5Q9P267 1494 aa22.76■■□□□ 1.23
ABCF3-204ENST00000463685 ABCC5O15440 1437 aa22.74■■□□□ 1.23
ABCF3-204ENST00000463685 KIAA1107Q9UPP5 1409 aa22.74■■□□□ 1.23
ABCF3-204ENST00000463685 TRAPPC8Q9Y2L5 1435 aa22.74■■□□□ 1.23
ABCF3-204ENST00000463685 PTPRKQ15262 1439 aa22.74■■□□□ 1.23
ABCF3-204ENST00000463685 DAPK1P53355 1430 aa22.73■■□□□ 1.23
ABCF3-204ENST00000463685 DNMT1P26358 1616 aaKnown RBP22.72■■□□□ 1.23
ABCF3-204ENST00000463685 CHIC2Q9UKJ5 165 aa22.71■■□□□ 1.23
ABCF3-204ENST00000463685 ARHGEF5Q12774 1597 aa22.71■■□□□ 1.23
ABCF3-204ENST00000463685 AFAP1Q8N556 730 aa22.7■■□□□ 1.22
ABCF3-204ENST00000463685 CCDC141Q6ZP82 1450 aa22.69■■□□□ 1.22
ABCF3-204ENST00000463685 RAPGEF3O95398 923 aa22.68■■□□□ 1.22
ABCF3-204ENST00000463685 DENND4BO75064 1496 aaPredicted RBP22.66■■□□□ 1.22
ABCF3-204ENST00000463685 POGZQ7Z3K3 1410 aa22.65■■□□□ 1.22
ABCF3-204ENST00000463685 CROCC2H7BZ55 1655 aa22.65■■□□□ 1.22
ABCF3-204ENST00000463685 COL17A1Q9UMD9 1497 aaPredicted RBP22.65■■□□□ 1.22
ABCF3-204ENST00000463685 RSPH4AQ5TD94 716 aa22.64■■□□□ 1.21
ABCF3-204ENST00000463685 C9orf84Q5VXU9 1444 aa22.64■■□□□ 1.21
ABCF3-204ENST00000463685 TSPY4P0CV99 314 aa22.63■■□□□ 1.21
ABCF3-204ENST00000463685 TSPY10P0CW01 314 aa22.63■■□□□ 1.21
ABCF3-204ENST00000463685 ZNF518AQ6AHZ1 1483 aa22.61■■□□□ 1.21
ABCF3-204ENST00000463685 FRMPD1Q5SYB0 1578 aa22.61■■□□□ 1.21
ABCF3-204ENST00000463685 RICTORQ6R327 1708 aa22.61■■□□□ 1.21
ABCF3-204ENST00000463685 SHANK2Q9UPX8 1470 aa22.6■■□□□ 1.21
ABCF3-204ENST00000463685 SPAG9O60271 1321 aaKnown RBP22.6■■□□□ 1.21
ABCF3-204ENST00000463685 RRP7BPQ9NSQ0 103 aa22.6■■□□□ 1.21
ABCF3-204ENST00000463685 MYT1LQ9UL68 1186 aa22.58■■□□□ 1.21
ABCF3-204ENST00000463685 KDM5CP41229 1560 aa22.57■■□□□ 1.2
ABCF3-204ENST00000463685 MAST1Q9Y2H9 1570 aa22.57■■□□□ 1.2
ABCF3-204ENST00000463685 ADGBQ8N7X0 1667 aa22.55■■□□□ 1.2
ABCF3-204ENST00000463685 ZFYVE16Q7Z3T8 1539 aa22.55■■□□□ 1.2
ABCF3-204ENST00000463685 ADGRL2O95490 1459 aa22.54■■□□□ 1.2
ABCF3-204ENST00000463685 NCOA1Q15788 1441 aa22.54■■□□□ 1.2
ABCF3-204ENST00000463685 INO80Q9ULG1 1556 aaPredicted RBP22.54■■□□□ 1.2
ABCF3-204ENST00000463685 ROCK1Q13464 1354 aa22.53■■□□□ 1.2
ABCF3-204ENST00000463685 ANKRD30AQ9BXX3 1397 aa22.53■■□□□ 1.2
ABCF3-204ENST00000463685 ATP7AQ04656 1500 aa22.53■■□□□ 1.2
ABCF3-204ENST00000463685 KDM6BO15054 1643 aa22.52■■□□□ 1.2
ABCF3-204ENST00000463685 HECW2Q9P2P5 1572 aa22.51■■□□□ 1.19
ABCF3-204ENST00000463685 KIDINS220Q9ULH0 1771 aa22.51■■□□□ 1.19
ABCF3-204ENST00000463685 RTEL1-TNFRSF6BF6WH68 1400 aa22.51■■□□□ 1.19
ABCF3-204ENST00000463685 MLH3Q9UHC1 1453 aa22.5■■□□□ 1.19
ABCF3-204ENST00000463685 ZMYM4Q5VZL5 1548 aa22.5■■□□□ 1.19
ABCF3-204ENST00000463685 KIF15Q9NS87 1388 aa22.5■■□□□ 1.19
ABCF3-204ENST00000463685 NAIPQ13075 1403 aa22.49■■□□□ 1.19
ABCF3-204ENST00000463685 HFM1A2PYH4 1435 aa22.48■■□□□ 1.19
ABCF3-204ENST00000463685 YEATS2Q9ULM3 1422 aa22.48■■□□□ 1.19
ABCF3-204ENST00000463685 PLXNC1O60486 1568 aa22.47■■□□□ 1.19
ABCF3-204ENST00000463685 SETD5Q9C0A6 1442 aa22.46■■□□□ 1.19
ABCF3-204ENST00000463685 ABCA6Q8N139 1617 aa22.46■■□□□ 1.19
ABCF3-204ENST00000463685 GCC2Q8IWJ2 1684 aa22.44■■□□□ 1.18
ABCF3-204ENST00000463685 DIP2CQ9Y2E4 1556 aa22.42■■□□□ 1.18
ABCF3-204ENST00000463685 RAB3GAP2Q9H2M9 1393 aa22.42■■□□□ 1.18
ABCF3-204ENST00000463685 MAGI2Q86UL8 1455 aa22.41■■□□□ 1.18
ABCF3-204ENST00000463685 DUOX2Q9NRD8 1548 aa22.4■■□□□ 1.18
ABCF3-204ENST00000463685 ANKRD50Q9ULJ7 1429 aa22.4■■□□□ 1.18
ABCF3-204ENST00000463685 A2MP01023 1474 aa22.38■■□□□ 1.17
ABCF3-204ENST00000463685 DHX29Q7Z478 1369 aaKnown RBP22.38■■□□□ 1.17
ABCF3-204ENST00000463685 ARHGEF40Q8TER5 1519 aa22.37■■□□□ 1.17
ABCF3-204ENST00000463685 ATP10AO60312 1499 aa22.35■■□□□ 1.17
ABCF3-204ENST00000463685 ERBINQ96RT1 1412 aa22.33■■□□□ 1.17
ABCF3-204ENST00000463685 KIF3BO15066 747 aa22.31■■□□□ 1.16
ABCF3-204ENST00000463685 SIGLEC1Q9BZZ2 1709 aa22.29■■□□□ 1.16
ABCF3-204ENST00000463685 TRIM52Q96A61 297 aa22.29■■□□□ 1.16
ABCF3-204ENST00000463685 HRCP23327 699 aa22.27■■□□□ 1.16
ABCF3-204ENST00000463685 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.27■■□□□ 1.16
ABCF3-204ENST00000463685 REREQ9P2R6 1566 aa22.25■■□□□ 1.15
ABCF3-204ENST00000463685 EIF2AK4Q9P2K8 1649 aaKnown RBP22.25■■□□□ 1.15
ABCF3-204ENST00000463685 UNC13BO14795 1591 aa22.22■■□□□ 1.15
ABCF3-204ENST00000463685 GGT6Q6P531 493 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms