RNA–Protein interactions for RNA: ENST00000463533.1

ANKRD28-208, Transcript of ankyrin repeat domain 28, humanhuman

TSL 3

Gene ANKRD28, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-208ENST00000463533 UACAQ9BZF9 1416 aa13.43□□□□□ -0.26
ANKRD28-208ENST00000463533 ADCY10Q96PN6 1610 aa13.42□□□□□ -0.26
ANKRD28-208ENST00000463533 ABCA8O94911 1581 aa13.42□□□□□ -0.26
ANKRD28-208ENST00000463533 CREBZFQ9NS37 354 aa13.41□□□□□ -0.26
ANKRD28-208ENST00000463533 RAPGEF6Q8TEU7 1601 aa13.41□□□□□ -0.26
ANKRD28-208ENST00000463533 FMN1Q68DA7 1419 aa13.39□□□□□ -0.27
ANKRD28-208ENST00000463533 ARID3CA6NKF2 412 aa13.39□□□□□ -0.27
ANKRD28-208ENST00000463533 ATP1B4Q9UN42 357 aaPredicted RBP13.39□□□□□ -0.27
ANKRD28-208ENST00000463533 ABCC2Q92887 1545 aa13.39□□□□□ -0.27
ANKRD28-208ENST00000463533 UHRF1BP1LA0JNW5 1464 aa13.38□□□□□ -0.27
ANKRD28-208ENST00000463533 PCF11O94913 1555 aaKnown RBP13.37□□□□□ -0.27
ANKRD28-208ENST00000463533 FARP1Q9Y4F1 1045 aaPredicted RBP13.36□□□□□ -0.27
ANKRD28-208ENST00000463533 HAX1O00165 279 aa13.35□□□□□ -0.27
ANKRD28-208ENST00000463533 LRRIQ1Q96JM4 1722 aa13.35□□□□□ -0.27
ANKRD28-208ENST00000463533 ZCCHC11Q5TAX3 1644 aaKnown RBP13.35□□□□□ -0.27
ANKRD28-208ENST00000463533 NPM1P06748 294 aaKnown RBP eCLIP13.34□□□□□ -0.27
ANKRD28-208ENST00000463533 FBXO3Q9UK99 471 aa13.34□□□□□ -0.27
ANKRD28-208ENST00000463533 NUP153P49790 1475 aaKnown RBP13.34□□□□□ -0.27
ANKRD28-208ENST00000463533 CASKIN1Q8WXD9 1431 aa13.33□□□□□ -0.28
ANKRD28-208ENST00000463533 HECW1Q76N89 1606 aa13.33□□□□□ -0.28
ANKRD28-208ENST00000463533 VPS8Q8N3P4 1428 aa13.32□□□□□ -0.28
ANKRD28-208ENST00000463533 ATP10BO94823 1461 aa13.32□□□□□ -0.28
ANKRD28-208ENST00000463533 KDM5BQ9UGL1 1544 aa13.32□□□□□ -0.28
ANKRD28-208ENST00000463533 FYCO1Q9BQS8 1478 aa13.3□□□□□ -0.28
ANKRD28-208ENST00000463533 CDK13Q14004 1512 aaKnown RBP13.3□□□□□ -0.28
ANKRD28-208ENST00000463533 EPRSP07814 1512 aaKnown RBP13.29□□□□□ -0.28
ANKRD28-208ENST00000463533 MIER1Q8N108 512 aa13.27□□□□□ -0.29
ANKRD28-208ENST00000463533 C19orf67A6NJJ6 358 aa13.26□□□□□ -0.29
ANKRD28-208ENST00000463533 PLEKHG5O94827 1062 aa13.26□□□□□ -0.29
ANKRD28-208ENST00000463533 ASXL2Q76L83 1435 aa13.26□□□□□ -0.29
ANKRD28-208ENST00000463533 MAPKBP1O60336 1514 aa13.24□□□□□ -0.29
ANKRD28-208ENST00000463533 CCDC18Q5T9S5 1454 aa13.24□□□□□ -0.29
ANKRD28-208ENST00000463533 MNX1P50219 401 aaPredicted RBP13.24□□□□□ -0.29
ANKRD28-208ENST00000463533 PLCD3Q8N3E9 789 aa13.23□□□□□ -0.29
ANKRD28-208ENST00000463533 KCNH8Q96L42 1107 aa13.23□□□□□ -0.29
ANKRD28-208ENST00000463533 PLEKHD1A6NEE1 506 aa13.22□□□□□ -0.29
ANKRD28-208ENST00000463533 CFAP43Q8NDM7 1665 aa13.21□□□□□ -0.29
ANKRD28-208ENST00000463533 WDR7Q9Y4E6 1490 aa13.21□□□□□ -0.3
ANKRD28-208ENST00000463533 TIAM1Q13009 1591 aa13.2□□□□□ -0.3
ANKRD28-208ENST00000463533 MAGI3Q5TCQ9 1506 aa13.2□□□□□ -0.3
ANKRD28-208ENST00000463533 CDK11AQ9UQ88 783 aaPredicted RBP13.2□□□□□ -0.3
ANKRD28-208ENST00000463533 KIF13AQ9H1H9 1805 aa13.2□□□□□ -0.3
ANKRD28-208ENST00000463533 EVX2Q03828 476 aa13.19□□□□□ -0.3
ANKRD28-208ENST00000463533 ABCC10Q5T3U5 1492 aa13.17□□□□□ -0.3
ANKRD28-208ENST00000463533 DIP2BQ9P265 1576 aa13.17□□□□□ -0.3
ANKRD28-208ENST00000463533 FAM69CQ0P6D2 419 aa13.17□□□□□ -0.3
ANKRD28-208ENST00000463533 SP7Q8TDD2 431 aaPredicted RBP13.17□□□□□ -0.3
ANKRD28-208ENST00000463533 TROQ12816 1431 aaPredicted RBP13.16□□□□□ -0.3
ANKRD28-208ENST00000463533 CD44P16070 742 aaKnown RBP13.16□□□□□ -0.3
ANKRD28-208ENST00000463533 KANK4Q5T7N3 995 aaPredicted RBP13.16□□□□□ -0.3
ANKRD28-208ENST00000463533 MAP3K1Q13233 1512 aa13.16□□□□□ -0.3
ANKRD28-208ENST00000463533 KIF14Q15058 1648 aa13.15□□□□□ -0.3
ANKRD28-208ENST00000463533 MTUS2Q5JR59 1369 aa13.15□□□□□ -0.3
ANKRD28-208ENST00000463533 TSPOAP1O95153 1857 aa13.14□□□□□ -0.31
ANKRD28-208ENST00000463533 GLI2P10070 1586 aa13.13□□□□□ -0.31
ANKRD28-208ENST00000463533 LRRC9Q6ZRR7 1453 aa13.13□□□□□ -0.31
ANKRD28-208ENST00000463533 PPARGC1BQ86YN6 1023 aaKnown RBP13.13□□□□□ -0.31
ANKRD28-208ENST00000463533 ZBTB47Q9UFB7 747 aaPredicted RBP13.13□□□□□ -0.31
ANKRD28-208ENST00000463533 VASPP50552 380 aaPredicted RBP13.12□□□□□ -0.31
ANKRD28-208ENST00000463533 EHBP1L1Q8N3D4 1523 aa13.12□□□□□ -0.31
ANKRD28-208ENST00000463533 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.12□□□□□ -0.31
ANKRD28-208ENST00000463533 TTC37Q6PGP7 1564 aa13.11□□□□□ -0.31
ANKRD28-208ENST00000463533 ABCA9Q8IUA7 1624 aa13.11□□□□□ -0.31
ANKRD28-208ENST00000463533 SUPT6HQ7KZ85 1726 aaKnown RBP13.1□□□□□ -0.31
ANKRD28-208ENST00000463533 MAP3K4Q9Y6R4 1608 aa13.1□□□□□ -0.31
ANKRD28-208ENST00000463533 CD109Q6YHK3 1445 aa13.08□□□□□ -0.32
ANKRD28-208ENST00000463533 MYO5CQ9NQX4 1742 aa13.08□□□□□ -0.32
ANKRD28-208ENST00000463533 PPRC1Q5VV67 1664 aaKnown RBP13.07□□□□□ -0.32
ANKRD28-208ENST00000463533 NCOA2Q15596 1464 aa13.06□□□□□ -0.32
ANKRD28-208ENST00000463533 CDC42BPAQ5VT25 1732 aa13.06□□□□□ -0.32
ANKRD28-208ENST00000463533 PAK3O75914 559 aaPredicted RBP13.06□□□□□ -0.32
ANKRD28-208ENST00000463533 CDC42BPBQ9Y5S2 1711 aa13.05□□□□□ -0.32
ANKRD28-208ENST00000463533 ZRANB1Q9UGI0 708 aa13.05□□□□□ -0.32
ANKRD28-208ENST00000463533 CCNB3Q8WWL7 1395 aa13.05□□□□□ -0.32
ANKRD28-208ENST00000463533 PLCH2O75038 1416 aa13.03□□□□□ -0.32
ANKRD28-208ENST00000463533 GPATCH8Q9UKJ3 1502 aaKnown RBP13.03□□□□□ -0.32
ANKRD28-208ENST00000463533 PREX2Q70Z35 1606 aa13.02□□□□□ -0.32
ANKRD28-208ENST00000463533 ARHGAP5Q13017 1502 aa13.01□□□□□ -0.33
ANKRD28-208ENST00000463533 ITSN2Q9NZM3 1697 aa13.01□□□□□ -0.33
ANKRD28-208ENST00000463533 PHLDB1Q86UU1 1377 aa13□□□□□ -0.33
ANKRD28-208ENST00000463533 TEX14Q8IWB6 1497 aa12.99□□□□□ -0.33
ANKRD28-208ENST00000463533 ZNF579Q8NAF0 562 aaKnown RBP12.99□□□□□ -0.33
ANKRD28-208ENST00000463533 CFDP1Q9UEE9 299 aaPredicted RBP12.99□□□□□ -0.33
ANKRD28-208ENST00000463533 ZNF777Q9ULD5 760 aaPredicted RBP12.99□□□□□ -0.33
ANKRD28-208ENST00000463533 FANCAO15360 1455 aa12.98□□□□□ -0.33
ANKRD28-208ENST00000463533 EFCAB2Q5VUJ9 269 aa12.98□□□□□ -0.33
ANKRD28-208ENST00000463533 ARAP3Q8WWN8 1544 aa12.98□□□□□ -0.33
ANKRD28-208ENST00000463533 MYOM3Q5VTT5 1437 aa12.97□□□□□ -0.33
ANKRD28-208ENST00000463533 KLHL34Q8N239 644 aa12.97□□□□□ -0.33
ANKRD28-208ENST00000463533 CFAP74Q9C0B2 1584 aa12.97□□□□□ -0.33
ANKRD28-208ENST00000463533 AKNAQ7Z591 1439 aa12.96□□□□□ -0.33
ANKRD28-208ENST00000463533 ZNF644Q9H582 1327 aaPredicted RBP12.96□□□□□ -0.33
ANKRD28-208ENST00000463533 CLCN6P51797 869 aa12.96□□□□□ -0.33
ANKRD28-208ENST00000463533 TSPYL2Q9H2G4 693 aaPredicted RBP12.96□□□□□ -0.33
ANKRD28-208ENST00000463533 SAMD9LQ8IVG5 1584 aa12.95□□□□□ -0.34
ANKRD28-208ENST00000463533 GABBR2O75899 941 aa12.95□□□□□ -0.34
ANKRD28-208ENST00000463533 NUBP1P53384 320 aa12.95□□□□□ -0.34
ANKRD28-208ENST00000463533 RASEFQ8IZ41 740 aa12.95□□□□□ -0.34
ANKRD28-208ENST00000463533 NEO1Q92859 1461 aa12.95□□□□□ -0.34
ANKRD28-208ENST00000463533 PTPN23Q9H3S7 1636 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms