RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 KIF14Q15058 1648 aa38.39■■■■□ 3.74
SSNA1-203ENST00000463511 MAGI2Q86UL8 1455 aa38.37■■■■□ 3.73
SSNA1-203ENST00000463511 POGZQ7Z3K3 1410 aa38.37■■■■□ 3.73
SSNA1-203ENST00000463511 LMTK3Q96Q04 1460 aa38.36■■■■□ 3.73
SSNA1-203ENST00000463511 SCAPERQ9BY12 1400 aa38.35■■■■□ 3.73
SSNA1-203ENST00000463511 CHIC1Q5VXU3 224 aa38.34■■■■□ 3.73
SSNA1-203ENST00000463511 FER1L4A9Z1Z3 1794 aa38.34■■■■□ 3.73
SSNA1-203ENST00000463511 CDK11AQ9UQ88 783 aaPredicted RBP38.25■■■■□ 3.71
SSNA1-203ENST00000463511 TROQ12816 1431 aaPredicted RBP38.23■■■■□ 3.71
SSNA1-203ENST00000463511 PLPPR3Q6T4P5 718 aa38.22■■■■□ 3.71
SSNA1-203ENST00000463511 EFCAB2Q5VUJ9 269 aa38.21■■■■□ 3.71
SSNA1-203ENST00000463511 ARHGAP5Q13017 1502 aa38.2■■■■□ 3.71
SSNA1-203ENST00000463511 MLECQ14165 292 aa38.19■■■■□ 3.7
SSNA1-203ENST00000463511 CLIP1P30622 1438 aa38.18■■■■□ 3.7
SSNA1-203ENST00000463511 CDC42BPBQ9Y5S2 1711 aa38.18■■■■□ 3.7
SSNA1-203ENST00000463511 ATP10AO60312 1499 aa38.17■■■■□ 3.7
SSNA1-203ENST00000463511 C9orf84Q5VXU9 1444 aa38.15■■■■□ 3.7
SSNA1-203ENST00000463511 ZNF518AQ6AHZ1 1483 aa38.14■■■■□ 3.7
SSNA1-203ENST00000463511 KDM5CP41229 1560 aa38.13■■■■□ 3.69
SSNA1-203ENST00000463511 ARHGEF12Q9NZN5 1544 aa38.12■■■■□ 3.69
SSNA1-203ENST00000463511 FBXO41Q8TF61 875 aa38.11■■■■□ 3.69
SSNA1-203ENST00000463511 PREX2Q70Z35 1606 aa38.09■■■■□ 3.69
SSNA1-203ENST00000463511 HSPA2P54652 639 aa38.09■■■■□ 3.69
SSNA1-203ENST00000463511 CCDC18Q5T9S5 1454 aa38.05■■■■□ 3.68
SSNA1-203ENST00000463511 DIP2CQ9Y2E4 1556 aa38.04■■■■□ 3.68
SSNA1-203ENST00000463511 CASKIN1Q8WXD9 1431 aa38.04■■■■□ 3.68
SSNA1-203ENST00000463511 PREX1Q8TCU6 1659 aa38.03■■■■□ 3.68
SSNA1-203ENST00000463511 AFAP1Q8N556 730 aa38.01■■■■□ 3.68
SSNA1-203ENST00000463511 ITSN2Q9NZM3 1697 aa38.01■■■■□ 3.67
SSNA1-203ENST00000463511 ABCA6Q8N139 1617 aa38■■■■□ 3.67
SSNA1-203ENST00000463511 CDC42BPAQ5VT25 1732 aa38■■■■□ 3.67
SSNA1-203ENST00000463511 ABCC1P33527 1531 aa37.98■■■■□ 3.67
SSNA1-203ENST00000463511 REREQ9P2R6 1566 aa37.94■■■■□ 3.66
SSNA1-203ENST00000463511 MYT1LQ9UL68 1186 aa37.94■■■■□ 3.66
SSNA1-203ENST00000463511 FYCO1Q9BQS8 1478 aa37.91■■■■□ 3.66
SSNA1-203ENST00000463511 MLH3Q9UHC1 1453 aa37.9■■■■□ 3.66
SSNA1-203ENST00000463511 TRAPPC8Q9Y2L5 1435 aa37.88■■■■□ 3.66
SSNA1-203ENST00000463511 CEBPAP49715 358 aaPredicted RBP37.87■■■■□ 3.65
SSNA1-203ENST00000463511 KIDINS220Q9ULH0 1771 aa37.86■■■■□ 3.65
SSNA1-203ENST00000463511 C3P01024 1663 aa37.84■■■■□ 3.65
SSNA1-203ENST00000463511 SETD1BQ9UPS6 1966 aaKnown RBP37.81■■■■□ 3.64
SSNA1-203ENST00000463511 AGLP35573 1532 aa37.78■■■■□ 3.64
SSNA1-203ENST00000463511 SAMD9LQ8IVG5 1584 aa37.78■■■■□ 3.64
SSNA1-203ENST00000463511 STRCQ7RTU9 1775 aa37.78■■■■□ 3.64
SSNA1-203ENST00000463511 UHRF1BP1Q6BDS2 1440 aa37.73■■■■□ 3.63
SSNA1-203ENST00000463511 SYCP2Q9BX26 1530 aa37.72■■■■□ 3.63
SSNA1-203ENST00000463511 GPATCH8Q9UKJ3 1502 aaKnown RBP37.68■■■■□ 3.62
SSNA1-203ENST00000463511 ZNF777Q9ULD5 760 aaPredicted RBP37.67■■■■□ 3.62
SSNA1-203ENST00000463511 CERKQ8TCT0 537 aa37.66■■■■□ 3.62
SSNA1-203ENST00000463511 SUPT6HQ7KZ85 1726 aaKnown RBP37.64■■■■□ 3.62
SSNA1-203ENST00000463511 ESF1Q9H501 851 aaKnown RBP37.63■■■■□ 3.61
SSNA1-203ENST00000463511 MROH2AA6NES4 1674 aa37.59■■■■□ 3.61
SSNA1-203ENST00000463511 INO80Q9ULG1 1556 aaPredicted RBP37.58■■■■□ 3.61
SSNA1-203ENST00000463511 ATP7AQ04656 1500 aa37.57■■■■□ 3.61
SSNA1-203ENST00000463511 CNTLNQ9NXG0 1405 aa37.56■■■■□ 3.6
SSNA1-203ENST00000463511 HNRNPMP52272 730 aaKnown RBP eCLIP37.55■■■■□ 3.6
SSNA1-203ENST00000463511 SPAG9O60271 1321 aaKnown RBP37.54■■■■□ 3.6
SSNA1-203ENST00000463511 CCNB3Q8WWL7 1395 aa37.53■■■■□ 3.6
SSNA1-203ENST00000463511 PLEKHH2Q8IVE3 1493 aa37.52■■■■□ 3.6
SSNA1-203ENST00000463511 DMRT2Q9Y5R5 561 aa37.52■■■■□ 3.6
SSNA1-203ENST00000463511 MTUS2Q5JR59 1369 aa37.51■■■■□ 3.59
SSNA1-203ENST00000463511 PLXNC1O60486 1568 aa37.51■■■■□ 3.59
SSNA1-203ENST00000463511 CFDP1Q9UEE9 299 aaPredicted RBP37.5■■■■□ 3.59
SSNA1-203ENST00000463511 KIAA1107Q9UPP5 1409 aa37.5■■■■□ 3.59
SSNA1-203ENST00000463511 CLTCQ00610 1675 aaKnown RBP37.5■■■■□ 3.59
SSNA1-203ENST00000463511 TIAM1Q13009 1591 aa37.47■■■■□ 3.59
SSNA1-203ENST00000463511 EHBP1L1Q8N3D4 1523 aa37.44■■■■□ 3.58
SSNA1-203ENST00000463511 ADGBQ8N7X0 1667 aa37.44■■■■□ 3.58
SSNA1-203ENST00000463511 A2MP01023 1474 aa37.42■■■■□ 3.58
SSNA1-203ENST00000463511 PTPRTO14522 1441 aa37.42■■■■□ 3.58
SSNA1-203ENST00000463511 NPATQ14207 1427 aa37.41■■■■□ 3.58
SSNA1-203ENST00000463511 NCOA1Q15788 1441 aa37.37■■■■□ 3.57
SSNA1-203ENST00000463511 ZMYM3Q14202 1370 aa37.37■■■■□ 3.57
SSNA1-203ENST00000463511 CAMSAP1Q5T5Y3 1602 aa37.36■■■■□ 3.57
SSNA1-203ENST00000463511 MYO3AQ8NEV4 1616 aa37.35■■■■□ 3.57
SSNA1-203ENST00000463511 ZNF142P52746 1687 aaPredicted RBP37.34■■■■□ 3.57
SSNA1-203ENST00000463511 ZNF644Q9H582 1327 aaPredicted RBP37.33■■■■□ 3.57
SSNA1-203ENST00000463511 CEP162Q5TB80 1403 aa37.32■■■■□ 3.56
SSNA1-203ENST00000463511 MBD5Q9P267 1494 aa37.29■■■■□ 3.56
SSNA1-203ENST00000463511 LTBP4Q8N2S1 1624 aa37.28■■■■□ 3.56
SSNA1-203ENST00000463511 GGT6Q6P531 493 aa37.26■■■■□ 3.56
SSNA1-203ENST00000463511 CEP170BQ9Y4F5 1589 aaPredicted RBP37.24■■■■□ 3.55
SSNA1-203ENST00000463511 PTPRKQ15262 1439 aa37.23■■■■□ 3.55
SSNA1-203ENST00000463511 RTEL1-TNFRSF6BF6WH68 1400 aa37.19■■■■□ 3.54
SSNA1-203ENST00000463511 NCOA2Q15596 1464 aa37.17■■■■□ 3.54
SSNA1-203ENST00000463511 CAMSAP2Q08AD1 1489 aa37.15■■■■□ 3.54
SSNA1-203ENST00000463511 CCDC141Q6ZP82 1450 aa37.14■■■■□ 3.54
SSNA1-203ENST00000463511 NCKAP5LQ9HCH0 1330 aa37.13■■■■□ 3.54
SSNA1-203ENST00000463511 PLA2R1Q13018 1463 aa37.13■■■■□ 3.53
SSNA1-203ENST00000463511 IQSEC2Q5JU85 1478 aa37.12■■■■□ 3.53
SSNA1-203ENST00000463511 PPP6R1Q9UPN7 881 aa37.11■■■■□ 3.53
SSNA1-203ENST00000463511 DHX29Q7Z478 1369 aaKnown RBP37.1■■■■□ 3.53
SSNA1-203ENST00000463511 TCOF1Q13428 1488 aaKnown RBP37.07■■■■□ 3.53
SSNA1-203ENST00000463511 DNMT1P26358 1616 aaKnown RBP37.05■■■■□ 3.52
SSNA1-203ENST00000463511 A2ML1A8K2U0 1454 aa37.03■■■■□ 3.52
SSNA1-203ENST00000463511 KDM5DQ9BY66 1539 aa37.03■■■■□ 3.52
SSNA1-203ENST00000463511 ARHGEF5Q12774 1597 aa37.03■■■■□ 3.52
SSNA1-203ENST00000463511 PKD2Q13563 968 aa37.02■■■■□ 3.52
SSNA1-203ENST00000463511 POLR1AO95602 1720 aaPredicted RBP37.02■■■■□ 3.52
SSNA1-203ENST00000463511 ZNF335Q9H4Z2 1342 aaPredicted RBP37.01■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms