RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 RAPGEF3O95398 923 aa19.32■□□□□ 0.68
RTCB-202ENST00000463455 PCF11O94913 1555 aaKnown RBP19.32■□□□□ 0.68
RTCB-202ENST00000463455 RICTORQ6R327 1708 aa19.31■□□□□ 0.68
RTCB-202ENST00000463455 LRRIQ1Q96JM4 1722 aa19.31■□□□□ 0.68
RTCB-202ENST00000463455 MYO5CQ9NQX4 1742 aa19.3■□□□□ 0.68
RTCB-202ENST00000463455 ZMYM4Q5VZL5 1548 aa19.3■□□□□ 0.68
RTCB-202ENST00000463455 ARHGEF40Q8TER5 1519 aa19.28■□□□□ 0.68
RTCB-202ENST00000463455 MAGI2Q86UL8 1455 aa19.28■□□□□ 0.68
RTCB-202ENST00000463455 EFCAB2Q5VUJ9 269 aa19.25■□□□□ 0.67
RTCB-202ENST00000463455 POGZQ7Z3K3 1410 aa19.24■□□□□ 0.67
RTCB-202ENST00000463455 SCAPERQ9BY12 1400 aa19.23■□□□□ 0.67
RTCB-202ENST00000463455 ADAMTSL3P82987 1691 aa19.2■□□□□ 0.66
RTCB-202ENST00000463455 ARHGAP5Q13017 1502 aa19.2■□□□□ 0.66
RTCB-202ENST00000463455 ZFYVE16Q7Z3T8 1539 aa19.2■□□□□ 0.66
RTCB-202ENST00000463455 ZNF518AQ6AHZ1 1483 aa19.18■□□□□ 0.66
RTCB-202ENST00000463455 BCORL1Q5H9F3 1711 aa19.18■□□□□ 0.66
RTCB-202ENST00000463455 PREX2Q70Z35 1606 aa19.18■□□□□ 0.66
RTCB-202ENST00000463455 CDC42BPBQ9Y5S2 1711 aa19.16■□□□□ 0.66
RTCB-202ENST00000463455 CEP162Q5TB80 1403 aa19.16■□□□□ 0.66
RTCB-202ENST00000463455 KDM5CP41229 1560 aa19.15■□□□□ 0.66
RTCB-202ENST00000463455 YEATS2Q9ULM3 1422 aa19.14■□□□□ 0.65
RTCB-202ENST00000463455 ARID4BQ4LE39 1312 aaPredicted RBP19.13■□□□□ 0.65
RTCB-202ENST00000463455 PTPRMP28827 1452 aa19.12■□□□□ 0.65
RTCB-202ENST00000463455 SCAF1Q9H7N4 1312 aaKnown RBP19.12■□□□□ 0.65
RTCB-202ENST00000463455 NCBP3Q53F19 620 aaKnown RBP19.11■□□□□ 0.65
RTCB-202ENST00000463455 CDC42BPAQ5VT25 1732 aa19.11■□□□□ 0.65
RTCB-202ENST00000463455 ABCC1P33527 1531 aa19.1■□□□□ 0.65
RTCB-202ENST00000463455 ATP10AO60312 1499 aa19.1■□□□□ 0.65
RTCB-202ENST00000463455 C9orf84Q5VXU9 1444 aa19.09■□□□□ 0.65
RTCB-202ENST00000463455 MADDQ8WXG6 1647 aa19.09■□□□□ 0.65
RTCB-202ENST00000463455 HECW2Q9P2P5 1572 aa19.09■□□□□ 0.65
RTCB-202ENST00000463455 MLH3Q9UHC1 1453 aa19.08■□□□□ 0.64
RTCB-202ENST00000463455 MTUS2Q5JR59 1369 aa19.07■□□□□ 0.64
RTCB-202ENST00000463455 MAPK8IP2Q13387 824 aaPredicted RBP19.07■□□□□ 0.64
RTCB-202ENST00000463455 REREQ9P2R6 1566 aa19.06■□□□□ 0.64
RTCB-202ENST00000463455 EHBP1L1Q8N3D4 1523 aa19.06■□□□□ 0.64
RTCB-202ENST00000463455 GPATCH8Q9UKJ3 1502 aaKnown RBP19.06■□□□□ 0.64
RTCB-202ENST00000463455 ITSN2Q9NZM3 1697 aa19.06■□□□□ 0.64
RTCB-202ENST00000463455 AFAP1Q8N556 730 aa19.04■□□□□ 0.64
RTCB-202ENST00000463455 SIGLEC1Q9BZZ2 1709 aa19.04■□□□□ 0.64
RTCB-202ENST00000463455 PLEKHH2Q8IVE3 1493 aa19.03■□□□□ 0.64
RTCB-202ENST00000463455 ARHGEF12Q9NZN5 1544 aa19.03■□□□□ 0.64
RTCB-202ENST00000463455 KIAA1107Q9UPP5 1409 aa19.02■□□□□ 0.64
RTCB-202ENST00000463455 TRAPPC8Q9Y2L5 1435 aa19.02■□□□□ 0.64
RTCB-202ENST00000463455 CCNB3Q8WWL7 1395 aa19.02■□□□□ 0.64
RTCB-202ENST00000463455 DIP2CQ9Y2E4 1556 aa19.02■□□□□ 0.63
RTCB-202ENST00000463455 RIMS1Q86UR5 1692 aaKnown RBP19.01■□□□□ 0.63
RTCB-202ENST00000463455 SAMD9LQ8IVG5 1584 aa19.01■□□□□ 0.63
RTCB-202ENST00000463455 AGLP35573 1532 aa18.99■□□□□ 0.63
RTCB-202ENST00000463455 VPS8Q8N3P4 1428 aa18.99■□□□□ 0.63
RTCB-202ENST00000463455 CFDP1Q9UEE9 299 aaPredicted RBP18.98■□□□□ 0.63
RTCB-202ENST00000463455 FER1L4A9Z1Z3 1794 aa18.98■□□□□ 0.63
RTCB-202ENST00000463455 ABCA6Q8N139 1617 aa18.97■□□□□ 0.63
RTCB-202ENST00000463455 SYCP2Q9BX26 1530 aa18.97■□□□□ 0.63
RTCB-202ENST00000463455 TIAM1Q13009 1591 aa18.97■□□□□ 0.63
RTCB-202ENST00000463455 KIDINS220Q9ULH0 1771 aa18.96■□□□□ 0.63
RTCB-202ENST00000463455 CNKSR2Q8WXI2 1034 aa18.95■□□□□ 0.62
RTCB-202ENST00000463455 MYT1LQ9UL68 1186 aa18.95■□□□□ 0.62
RTCB-202ENST00000463455 NPM3O75607 178 aaKnown RBP18.94■□□□□ 0.62
RTCB-202ENST00000463455 ZNF777Q9ULD5 760 aaPredicted RBP18.94■□□□□ 0.62
RTCB-202ENST00000463455 LOC105371045A0A1W2PR82 267 aa18.93■□□□□ 0.62
RTCB-202ENST00000463455 SUPT6HQ7KZ85 1726 aaKnown RBP18.93■□□□□ 0.62
RTCB-202ENST00000463455 MAP3K1Q13233 1512 aa18.93■□□□□ 0.62
RTCB-202ENST00000463455 MLECQ14165 292 aa18.92■□□□□ 0.62
RTCB-202ENST00000463455 LMTK3Q96Q04 1460 aa18.91■□□□□ 0.62
RTCB-202ENST00000463455 SPAG9O60271 1321 aaKnown RBP18.91■□□□□ 0.62
RTCB-202ENST00000463455 INO80Q9ULG1 1556 aaPredicted RBP18.9■□□□□ 0.62
RTCB-202ENST00000463455 NCOA2Q15596 1464 aa18.9■□□□□ 0.62
RTCB-202ENST00000463455 ATP7AQ04656 1500 aa18.9■□□□□ 0.62
RTCB-202ENST00000463455 HNRNPMP52272 730 aaKnown RBP eCLIP18.88■□□□□ 0.61
RTCB-202ENST00000463455 LRRC9Q6ZRR7 1453 aa18.87■□□□□ 0.61
RTCB-202ENST00000463455 MBD5Q9P267 1494 aa18.87■□□□□ 0.61
RTCB-202ENST00000463455 CNTLNQ9NXG0 1405 aa18.86■□□□□ 0.61
RTCB-202ENST00000463455 PLXNC1O60486 1568 aa18.85■□□□□ 0.61
RTCB-202ENST00000463455 RTEL1-TNFRSF6BF6WH68 1400 aa18.85■□□□□ 0.61
RTCB-202ENST00000463455 RSPH4AQ5TD94 716 aa18.85■□□□□ 0.61
RTCB-202ENST00000463455 A2MP01023 1474 aa18.83■□□□□ 0.6
RTCB-202ENST00000463455 SETD1BQ9UPS6 1966 aaKnown RBP18.82■□□□□ 0.6
RTCB-202ENST00000463455 ADGBQ8N7X0 1667 aa18.82■□□□□ 0.6
RTCB-202ENST00000463455 PREX1Q8TCU6 1659 aa18.82■□□□□ 0.6
RTCB-202ENST00000463455 ESF1Q9H501 851 aaKnown RBP18.81■□□□□ 0.6
RTCB-202ENST00000463455 CAMSAP2Q08AD1 1489 aa18.81■□□□□ 0.6
RTCB-202ENST00000463455 CCDC141Q6ZP82 1450 aa18.81■□□□□ 0.6
RTCB-202ENST00000463455 ZNF644Q9H582 1327 aaPredicted RBP18.8■□□□□ 0.6
RTCB-202ENST00000463455 ARHGEF5Q12774 1597 aa18.79■□□□□ 0.6
RTCB-202ENST00000463455 MROH2AA6NES4 1674 aa18.79■□□□□ 0.6
RTCB-202ENST00000463455 C3P01024 1663 aa18.77■□□□□ 0.6
RTCB-202ENST00000463455 MIA2Q96PC5 1412 aa18.76■□□□□ 0.59
RTCB-202ENST00000463455 UHRF1BP1Q6BDS2 1440 aa18.74■□□□□ 0.59
RTCB-202ENST00000463455 CEBPAP49715 358 aaPredicted RBP18.74■□□□□ 0.59
RTCB-202ENST00000463455 NPATQ14207 1427 aa18.74■□□□□ 0.59
RTCB-202ENST00000463455 MYOM3Q5VTT5 1437 aa18.74■□□□□ 0.59
RTCB-202ENST00000463455 DHX29Q7Z478 1369 aaKnown RBP18.73■□□□□ 0.59
RTCB-202ENST00000463455 FAM135AQ9P2D6 1515 aa18.73■□□□□ 0.59
RTCB-202ENST00000463455 APLP2Q06481 763 aa18.72■□□□□ 0.59
RTCB-202ENST00000463455 KANK4Q5T7N3 995 aaPredicted RBP18.72■□□□□ 0.59
RTCB-202ENST00000463455 TSPY4P0CV99 314 aa18.7■□□□□ 0.58
RTCB-202ENST00000463455 TSPY10P0CW01 314 aa18.7■□□□□ 0.58
RTCB-202ENST00000463455 HSPA2P54652 639 aa18.7■□□□□ 0.58
RTCB-202ENST00000463455 ZMYM3Q14202 1370 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms