RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 PCF11O94913 1555 aaKnown RBP32.64■■■□□ 2.82
VARS-221ENST00000463184 EFCAB2Q5VUJ9 269 aa32.64■■■□□ 2.82
VARS-221ENST00000463184 RIMS1Q86UR5 1692 aaKnown RBP32.62■■■□□ 2.81
VARS-221ENST00000463184 LMTK3Q96Q04 1460 aa32.61■■■□□ 2.81
VARS-221ENST00000463184 FBXO41Q8TF61 875 aa32.56■■■□□ 2.8
VARS-221ENST00000463184 MYO5CQ9NQX4 1742 aa32.54■■■□□ 2.8
VARS-221ENST00000463184 TROQ12816 1431 aaPredicted RBP32.54■■■□□ 2.8
VARS-221ENST00000463184 MLECQ14165 292 aa32.54■■■□□ 2.8
VARS-221ENST00000463184 SIGLEC1Q9BZZ2 1709 aa32.54■■■□□ 2.8
VARS-221ENST00000463184 ATP10AO60312 1499 aa32.52■■■□□ 2.8
VARS-221ENST00000463184 KIF14Q15058 1648 aa32.51■■■□□ 2.8
VARS-221ENST00000463184 PLPPR3Q6T4P5 718 aa32.51■■■□□ 2.79
VARS-221ENST00000463184 CLIP1P30622 1438 aa32.51■■■□□ 2.79
VARS-221ENST00000463184 C9orf84Q5VXU9 1444 aa32.48■■■□□ 2.79
VARS-221ENST00000463184 ZNF518AQ6AHZ1 1483 aa32.46■■■□□ 2.79
VARS-221ENST00000463184 ARHGAP5Q13017 1502 aa32.45■■■□□ 2.78
VARS-221ENST00000463184 HSPA2P54652 639 aa32.44■■■□□ 2.78
VARS-221ENST00000463184 FER1L4A9Z1Z3 1794 aa32.42■■■□□ 2.78
VARS-221ENST00000463184 AFAP1Q8N556 730 aa32.42■■■□□ 2.78
VARS-221ENST00000463184 ARHGEF12Q9NZN5 1544 aa32.41■■■□□ 2.78
VARS-221ENST00000463184 LRRIQ1Q96JM4 1722 aa32.39■■■□□ 2.78
VARS-221ENST00000463184 KDM5CP41229 1560 aa32.37■■■□□ 2.77
VARS-221ENST00000463184 CASKIN1Q8WXD9 1431 aa32.37■■■□□ 2.77
VARS-221ENST00000463184 MYT1LQ9UL68 1186 aa32.36■■■□□ 2.77
VARS-221ENST00000463184 CCDC18Q5T9S5 1454 aa32.35■■■□□ 2.77
VARS-221ENST00000463184 CDC42BPBQ9Y5S2 1711 aa32.31■■■□□ 2.76
VARS-221ENST00000463184 MLH3Q9UHC1 1453 aa32.29■■■□□ 2.76
VARS-221ENST00000463184 CEBPAP49715 358 aaPredicted RBP32.28■■■□□ 2.76
VARS-221ENST00000463184 REREQ9P2R6 1566 aa32.25■■■□□ 2.75
VARS-221ENST00000463184 DIP2CQ9Y2E4 1556 aa32.25■■■□□ 2.75
VARS-221ENST00000463184 PREX2Q70Z35 1606 aa32.25■■■□□ 2.75
VARS-221ENST00000463184 TRAPPC8Q9Y2L5 1435 aa32.23■■■□□ 2.75
VARS-221ENST00000463184 ABCC1P33527 1531 aa32.22■■■□□ 2.75
VARS-221ENST00000463184 PREX1Q8TCU6 1659 aa32.21■■■□□ 2.75
VARS-221ENST00000463184 FYCO1Q9BQS8 1478 aa32.2■■■□□ 2.75
VARS-221ENST00000463184 ABCA6Q8N139 1617 aa32.18■■■□□ 2.74
VARS-221ENST00000463184 AGLP35573 1532 aa32.16■■■□□ 2.74
VARS-221ENST00000463184 ITSN2Q9NZM3 1697 aa32.16■■■□□ 2.74
VARS-221ENST00000463184 CERKQ8TCT0 537 aa32.16■■■□□ 2.74
VARS-221ENST00000463184 SETD1BQ9UPS6 1966 aaKnown RBP32.16■■■□□ 2.74
VARS-221ENST00000463184 ESF1Q9H501 851 aaKnown RBP32.15■■■□□ 2.74
VARS-221ENST00000463184 UHRF1BP1Q6BDS2 1440 aa32.14■■■□□ 2.74
VARS-221ENST00000463184 CDC42BPAQ5VT25 1732 aa32.13■■■□□ 2.73
VARS-221ENST00000463184 DMRT2Q9Y5R5 561 aa32.12■■■□□ 2.73
VARS-221ENST00000463184 ZNF777Q9ULD5 760 aaPredicted RBP32.1■■■□□ 2.73
VARS-221ENST00000463184 KIDINS220Q9ULH0 1771 aa32.09■■■□□ 2.73
VARS-221ENST00000463184 GPATCH8Q9UKJ3 1502 aaKnown RBP32.06■■■□□ 2.72
VARS-221ENST00000463184 SAMD9LQ8IVG5 1584 aa32.03■■■□□ 2.72
VARS-221ENST00000463184 CNTLNQ9NXG0 1405 aa32.03■■■□□ 2.72
VARS-221ENST00000463184 C3P01024 1663 aa32.03■■■□□ 2.72
VARS-221ENST00000463184 SPAG9O60271 1321 aaKnown RBP32.01■■■□□ 2.72
VARS-221ENST00000463184 HNRNPMP52272 730 aaKnown RBP eCLIP32.01■■■□□ 2.71
VARS-221ENST00000463184 STRCQ7RTU9 1775 aa32.01■■■□□ 2.71
VARS-221ENST00000463184 CFDP1Q9UEE9 299 aaPredicted RBP32■■■□□ 2.71
VARS-221ENST00000463184 SYCP2Q9BX26 1530 aa32■■■□□ 2.71
VARS-221ENST00000463184 KIAA1107Q9UPP5 1409 aa32■■■□□ 2.71
VARS-221ENST00000463184 CCNB3Q8WWL7 1395 aa31.97■■■□□ 2.71
VARS-221ENST00000463184 PLEKHH2Q8IVE3 1493 aa31.97■■■□□ 2.71
VARS-221ENST00000463184 MTUS2Q5JR59 1369 aa31.94■■■□□ 2.7
VARS-221ENST00000463184 PTPRTO14522 1441 aa31.92■■■□□ 2.7
VARS-221ENST00000463184 ATP7AQ04656 1500 aa31.9■■■□□ 2.7
VARS-221ENST00000463184 ZMYM3Q14202 1370 aa31.89■■■□□ 2.7
VARS-221ENST00000463184 NPATQ14207 1427 aa31.88■■■□□ 2.69
VARS-221ENST00000463184 MROH2AA6NES4 1674 aa31.86■■■□□ 2.69
VARS-221ENST00000463184 SUPT6HQ7KZ85 1726 aaKnown RBP31.85■■■□□ 2.69
VARS-221ENST00000463184 A2MP01023 1474 aa31.84■■■□□ 2.69
VARS-221ENST00000463184 INO80Q9ULG1 1556 aaPredicted RBP31.84■■■□□ 2.69
VARS-221ENST00000463184 NCOA1Q15788 1441 aa31.82■■■□□ 2.68
VARS-221ENST00000463184 PLXNC1O60486 1568 aa31.81■■■□□ 2.68
VARS-221ENST00000463184 PPP6R1Q9UPN7 881 aa31.79■■■□□ 2.68
VARS-221ENST00000463184 GGT6Q6P531 493 aa31.78■■■□□ 2.68
VARS-221ENST00000463184 ZNF644Q9H582 1327 aaPredicted RBP31.77■■■□□ 2.68
VARS-221ENST00000463184 EHBP1L1Q8N3D4 1523 aa31.77■■■□□ 2.68
VARS-221ENST00000463184 TIAM1Q13009 1591 aa31.76■■■□□ 2.67
VARS-221ENST00000463184 CEP162Q5TB80 1403 aa31.75■■■□□ 2.67
VARS-221ENST00000463184 MBD5Q9P267 1494 aa31.74■■■□□ 2.67
VARS-221ENST00000463184 CLTCQ00610 1675 aaKnown RBP31.73■■■□□ 2.67
VARS-221ENST00000463184 CAMSAP1Q5T5Y3 1602 aa31.73■■■□□ 2.67
VARS-221ENST00000463184 RTEL1-TNFRSF6BF6WH68 1400 aa31.72■■■□□ 2.67
VARS-221ENST00000463184 ADGBQ8N7X0 1667 aa31.71■■■□□ 2.67
VARS-221ENST00000463184 PTPRKQ15262 1439 aa31.7■■■□□ 2.67
VARS-221ENST00000463184 LTBP4Q8N2S1 1624 aa31.7■■■□□ 2.66
VARS-221ENST00000463184 DHX29Q7Z478 1369 aaKnown RBP31.66■■■□□ 2.66
VARS-221ENST00000463184 PKD2Q13563 968 aa31.65■■■□□ 2.66
VARS-221ENST00000463184 NCKAP5LQ9HCH0 1330 aa31.65■■■□□ 2.66
VARS-221ENST00000463184 IQSEC2Q5JU85 1478 aa31.65■■■□□ 2.66
VARS-221ENST00000463184 RSPH4AQ5TD94 716 aa31.64■■■□□ 2.66
VARS-221ENST00000463184 PLA2R1Q13018 1463 aa31.63■■■□□ 2.65
VARS-221ENST00000463184 ZNF142P52746 1687 aaPredicted RBP31.62■■■□□ 2.65
VARS-221ENST00000463184 MYO3AQ8NEV4 1616 aa31.62■■■□□ 2.65
VARS-221ENST00000463184 CEP170BQ9Y4F5 1589 aaPredicted RBP31.6■■■□□ 2.65
VARS-221ENST00000463184 NCOA2Q15596 1464 aa31.59■■■□□ 2.65
VARS-221ENST00000463184 CCDC141Q6ZP82 1450 aa31.58■■■□□ 2.65
VARS-221ENST00000463184 KIF3BO15066 747 aa31.56■■■□□ 2.64
VARS-221ENST00000463184 TCOF1Q13428 1488 aaKnown RBP31.55■■■□□ 2.64
VARS-221ENST00000463184 CAMSAP2Q08AD1 1489 aa31.54■■■□□ 2.64
VARS-221ENST00000463184 ZNF335Q9H4Z2 1342 aaPredicted RBP31.52■■■□□ 2.64
VARS-221ENST00000463184 DISP3Q9P2K9 1392 aa31.52■■■□□ 2.64
VARS-221ENST00000463184 A2ML1A8K2U0 1454 aa31.52■■■□□ 2.64
VARS-221ENST00000463184 TSPY4P0CV99 314 aa31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms