RNA–Protein interactions for RNA: ENST00000463029.5

TMEM254-207, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 847 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-207ENST00000463029 RAPGEF3O95398 923 aa13.7□□□□□ -0.22
TMEM254-207ENST00000463029 KIF21BO75037 1637 aa13.69□□□□□ -0.22
TMEM254-207ENST00000463029 APLP2Q06481 763 aa13.69□□□□□ -0.22
TMEM254-207ENST00000463029 HECW2Q9P2P5 1572 aa13.68□□□□□ -0.22
TMEM254-207ENST00000463029 NEO1Q92859 1461 aa13.67□□□□□ -0.22
TMEM254-207ENST00000463029 PLEKHD1A6NEE1 506 aa13.67□□□□□ -0.22
TMEM254-207ENST00000463029 EFCAB5A4FU69 1503 aa13.66□□□□□ -0.22
TMEM254-207ENST00000463029 ABCB7O75027 752 aa13.66□□□□□ -0.22
TMEM254-207ENST00000463029 ZNF219Q9P2Y4 722 aaPredicted RBP13.65□□□□□ -0.22
TMEM254-207ENST00000463029 UBTFP17480 764 aaKnown RBP13.63□□□□□ -0.23
TMEM254-207ENST00000463029 ARID4BQ4LE39 1312 aaPredicted RBP13.62□□□□□ -0.23
TMEM254-207ENST00000463029 ILDR1Q86SU0 546 aaPredicted RBP13.61□□□□□ -0.23
TMEM254-207ENST00000463029 FRMPD1Q5SYB0 1578 aa13.61□□□□□ -0.23
TMEM254-207ENST00000463029 FANCAO15360 1455 aa13.6□□□□□ -0.23
TMEM254-207ENST00000463029 DENND4BO75064 1496 aaPredicted RBP13.6□□□□□ -0.23
TMEM254-207ENST00000463029 AKNAQ7Z591 1439 aa13.59□□□□□ -0.23
TMEM254-207ENST00000463029 ATP1B4Q9UN42 357 aaPredicted RBP13.59□□□□□ -0.23
TMEM254-207ENST00000463029 CDK13Q14004 1512 aaKnown RBP13.59□□□□□ -0.23
TMEM254-207ENST00000463029 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.59□□□□□ -0.23
TMEM254-207ENST00000463029 TTC37Q6PGP7 1564 aa13.58□□□□□ -0.24
TMEM254-207ENST00000463029 PTPRMP28827 1452 aa13.57□□□□□ -0.24
TMEM254-207ENST00000463029 ADAMTSL3P82987 1691 aa13.56□□□□□ -0.24
TMEM254-207ENST00000463029 ARHGEF40Q8TER5 1519 aa13.56□□□□□ -0.24
TMEM254-207ENST00000463029 CFAP74Q9C0B2 1584 aa13.56□□□□□ -0.24
TMEM254-207ENST00000463029 FMN1Q68DA7 1419 aa13.56□□□□□ -0.24
TMEM254-207ENST00000463029 ARHGAP35Q9NRY4 1499 aa13.54□□□□□ -0.24
TMEM254-207ENST00000463029 BCORL1Q5H9F3 1711 aa13.53□□□□□ -0.24
TMEM254-207ENST00000463029 RICTORQ6R327 1708 aa13.53□□□□□ -0.24
TMEM254-207ENST00000463029 CDK11AQ9UQ88 783 aaPredicted RBP13.52□□□□□ -0.25
TMEM254-207ENST00000463029 PLCH2O75038 1416 aa13.52□□□□□ -0.25
TMEM254-207ENST00000463029 HECW1Q76N89 1606 aa13.52□□□□□ -0.25
TMEM254-207ENST00000463029 MADDQ8WXG6 1647 aa13.52□□□□□ -0.25
TMEM254-207ENST00000463029 ZFYVE16Q7Z3T8 1539 aa13.51□□□□□ -0.25
TMEM254-207ENST00000463029 ZMYM4Q5VZL5 1548 aa13.5□□□□□ -0.25
TMEM254-207ENST00000463029 POGZQ7Z3K3 1410 aa13.5□□□□□ -0.25
TMEM254-207ENST00000463029 SCAPERQ9BY12 1400 aa13.5□□□□□ -0.25
TMEM254-207ENST00000463029 YEATS2Q9ULM3 1422 aa13.5□□□□□ -0.25
TMEM254-207ENST00000463029 EFCAB2Q5VUJ9 269 aa13.49□□□□□ -0.25
TMEM254-207ENST00000463029 MAGI2Q86UL8 1455 aa13.48□□□□□ -0.25
TMEM254-207ENST00000463029 ATXN8OSP0DMR3 200 aa13.48□□□□□ -0.25
TMEM254-207ENST00000463029 MLECQ14165 292 aa13.47□□□□□ -0.25
TMEM254-207ENST00000463029 TROQ12816 1431 aaPredicted RBP13.47□□□□□ -0.25
TMEM254-207ENST00000463029 RIMS1Q86UR5 1692 aaKnown RBP13.47□□□□□ -0.25
TMEM254-207ENST00000463029 POLA2Q14181 598 aa13.46□□□□□ -0.25
TMEM254-207ENST00000463029 CLIP1P30622 1438 aa13.46□□□□□ -0.26
TMEM254-207ENST00000463029 KIF14Q15058 1648 aa13.46□□□□□ -0.26
TMEM254-207ENST00000463029 PCF11O94913 1555 aaKnown RBP13.45□□□□□ -0.26
TMEM254-207ENST00000463029 LMTK3Q96Q04 1460 aa13.45□□□□□ -0.26
TMEM254-207ENST00000463029 MYO5CQ9NQX4 1742 aa13.44□□□□□ -0.26
TMEM254-207ENST00000463029 ARHGAP5Q13017 1502 aa13.44□□□□□ -0.26
TMEM254-207ENST00000463029 SIGLEC1Q9BZZ2 1709 aa13.43□□□□□ -0.26
TMEM254-207ENST00000463029 ATP10AO60312 1499 aa13.42□□□□□ -0.26
TMEM254-207ENST00000463029 C9orf84Q5VXU9 1444 aa13.41□□□□□ -0.26
TMEM254-207ENST00000463029 HSPA2P54652 639 aa13.41□□□□□ -0.26
TMEM254-207ENST00000463029 AFAP1Q8N556 730 aa13.41□□□□□ -0.26
TMEM254-207ENST00000463029 MYT1LQ9UL68 1186 aa13.41□□□□□ -0.26
TMEM254-207ENST00000463029 ZNF518AQ6AHZ1 1483 aa13.41□□□□□ -0.26
TMEM254-207ENST00000463029 CASKIN1Q8WXD9 1431 aa13.4□□□□□ -0.26
TMEM254-207ENST00000463029 LRRIQ1Q96JM4 1722 aa13.39□□□□□ -0.27
TMEM254-207ENST00000463029 FBXO41Q8TF61 875 aa13.39□□□□□ -0.27
TMEM254-207ENST00000463029 CCDC18Q5T9S5 1454 aa13.39□□□□□ -0.27
TMEM254-207ENST00000463029 FER1L4A9Z1Z3 1794 aa13.37□□□□□ -0.27
TMEM254-207ENST00000463029 KDM5CP41229 1560 aa13.37□□□□□ -0.27
TMEM254-207ENST00000463029 ARHGEF12Q9NZN5 1544 aa13.36□□□□□ -0.27
TMEM254-207ENST00000463029 FYCO1Q9BQS8 1478 aa13.35□□□□□ -0.27
TMEM254-207ENST00000463029 CEBPAP49715 358 aaPredicted RBP13.34□□□□□ -0.27
TMEM254-207ENST00000463029 PREX2Q70Z35 1606 aa13.34□□□□□ -0.27
TMEM254-207ENST00000463029 TRAPPC8Q9Y2L5 1435 aa13.33□□□□□ -0.28
TMEM254-207ENST00000463029 MLH3Q9UHC1 1453 aa13.33□□□□□ -0.28
TMEM254-207ENST00000463029 ABCC1P33527 1531 aa13.33□□□□□ -0.28
TMEM254-207ENST00000463029 CDC42BPBQ9Y5S2 1711 aa13.33□□□□□ -0.28
TMEM254-207ENST00000463029 DIP2CQ9Y2E4 1556 aa13.32□□□□□ -0.28
TMEM254-207ENST00000463029 ZNF777Q9ULD5 760 aaPredicted RBP13.32□□□□□ -0.28
TMEM254-207ENST00000463029 ABCA6Q8N139 1617 aa13.3□□□□□ -0.28
TMEM254-207ENST00000463029 REREQ9P2R6 1566 aa13.29□□□□□ -0.28
TMEM254-207ENST00000463029 ESF1Q9H501 851 aaKnown RBP13.29□□□□□ -0.28
TMEM254-207ENST00000463029 ITSN2Q9NZM3 1697 aa13.28□□□□□ -0.28
TMEM254-207ENST00000463029 CDC42BPAQ5VT25 1732 aa13.27□□□□□ -0.28
TMEM254-207ENST00000463029 GPATCH8Q9UKJ3 1502 aaKnown RBP13.27□□□□□ -0.29
TMEM254-207ENST00000463029 PREX1Q8TCU6 1659 aa13.27□□□□□ -0.29
TMEM254-207ENST00000463029 AGLP35573 1532 aa13.26□□□□□ -0.29
TMEM254-207ENST00000463029 HNRNPMP52272 730 aaKnown RBP eCLIP13.26□□□□□ -0.29
TMEM254-207ENST00000463029 UHRF1BP1Q6BDS2 1440 aa13.26□□□□□ -0.29
TMEM254-207ENST00000463029 CFDP1Q9UEE9 299 aaPredicted RBP13.26□□□□□ -0.29
TMEM254-207ENST00000463029 SAMD9LQ8IVG5 1584 aa13.25□□□□□ -0.29
TMEM254-207ENST00000463029 SYCP2Q9BX26 1530 aa13.25□□□□□ -0.29
TMEM254-207ENST00000463029 SPAG9O60271 1321 aaKnown RBP13.25□□□□□ -0.29
TMEM254-207ENST00000463029 MTUS2Q5JR59 1369 aa13.24□□□□□ -0.29
TMEM254-207ENST00000463029 CCNB3Q8WWL7 1395 aa13.24□□□□□ -0.29
TMEM254-207ENST00000463029 CERKQ8TCT0 537 aa13.24□□□□□ -0.29
TMEM254-207ENST00000463029 KIDINS220Q9ULH0 1771 aa13.24□□□□□ -0.29
TMEM254-207ENST00000463029 PLEKHH2Q8IVE3 1493 aa13.22□□□□□ -0.29
TMEM254-207ENST00000463029 CNTLNQ9NXG0 1405 aa13.22□□□□□ -0.29
TMEM254-207ENST00000463029 KIAA1107Q9UPP5 1409 aa13.22□□□□□ -0.29
TMEM254-207ENST00000463029 C3P01024 1663 aa13.21□□□□□ -0.3
TMEM254-207ENST00000463029 ATP7AQ04656 1500 aa13.19□□□□□ -0.3
TMEM254-207ENST00000463029 CEP162Q5TB80 1403 aa13.18□□□□□ -0.3
TMEM254-207ENST00000463029 SETD1BQ9UPS6 1966 aaKnown RBP13.18□□□□□ -0.3
TMEM254-207ENST00000463029 A2MP01023 1474 aa13.17□□□□□ -0.3
TMEM254-207ENST00000463029 ZNF644Q9H582 1327 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms