RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 MRS2Q9HD23 443 aa15.84■□□□□ 0.13
RBM39-223ENST00000463004 DAXXQ9UER7 740 aaPredicted RBP15.84■□□□□ 0.13
RBM39-223ENST00000463004 DCAF11Q8TEB1 546 aa15.83■□□□□ 0.12
RBM39-223ENST00000463004 WDR43Q15061 677 aaKnown RBP eCLIP15.83■□□□□ 0.123e-7■■□□□ 11.8
RBM39-223ENST00000463004 UACAQ9BZF9 1416 aa15.82■□□□□ 0.12
RBM39-223ENST00000463004 TMF1P82094 1093 aa15.82■□□□□ 0.12
RBM39-223ENST00000463004 SUPT6HQ7KZ85 1726 aaKnown RBP15.81■□□□□ 0.12
RBM39-223ENST00000463004 HNRNPUQ00839 825 aaKnown RBP eCLIP15.81■□□□□ 0.12
RBM39-223ENST00000463004 THOC2Q8NI27 1593 aaKnown RBP15.81■□□□□ 0.12
RBM39-223ENST00000463004 KIF3BO15066 747 aa15.8■□□□□ 0.12
RBM39-223ENST00000463004 EPRSP07814 1512 aaKnown RBP15.8■□□□□ 0.12
RBM39-223ENST00000463004 KNSTRNQ9Y448 316 aa15.79■□□□□ 0.12
RBM39-223ENST00000463004 GTF3C3Q9Y5Q9 886 aa15.79■□□□□ 0.12
RBM39-223ENST00000463004 GGT6Q6P531 493 aa15.78■□□□□ 0.12
RBM39-223ENST00000463004 MIER1Q8N108 512 aa15.78■□□□□ 0.12
RBM39-223ENST00000463004 WDR62O43379 1518 aa15.77■□□□□ 0.12
RBM39-223ENST00000463004 EIF3AQ14152 1382 aaKnown RBP15.76■□□□□ 0.11
RBM39-223ENST00000463004 CANXP27824 592 aaKnown RBP15.76■□□□□ 0.11
RBM39-223ENST00000463004 CFAP53Q96M91 514 aa15.76■□□□□ 0.11
RBM39-223ENST00000463004 FAM9BQ8IZU0 186 aa15.75■□□□□ 0.11
RBM39-223ENST00000463004 CCER2I3L3R5 266 aa15.75■□□□□ 0.11
RBM39-223ENST00000463004 ZNF608Q9ULD9 1512 aaPredicted RBP15.75■□□□□ 0.11
RBM39-223ENST00000463004 CCDC144AA2RUR9 1427 aa15.75■□□□□ 0.11
RBM39-223ENST00000463004 TRHP20396 242 aaPredicted RBP15.75■□□□□ 0.11
RBM39-223ENST00000463004 KIF15Q9NS87 1388 aa15.75■□□□□ 0.11
RBM39-223ENST00000463004 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.74■□□□□ 0.11
RBM39-223ENST00000463004 ZBTB47Q9UFB7 747 aaPredicted RBP15.74■□□□□ 0.11
RBM39-223ENST00000463004 PCF11O94913 1555 aaKnown RBP15.74■□□□□ 0.11
RBM39-223ENST00000463004 ANKRD50Q9ULJ7 1429 aa15.73■□□□□ 0.11
RBM39-223ENST00000463004 ROCK2O75116 1388 aaKnown RBP15.73■□□□□ 0.11
RBM39-223ENST00000463004 ARHGAP5Q13017 1502 aa15.73■□□□□ 0.11
RBM39-223ENST00000463004 CYB5RLQ6IPT4 315 aa15.73■□□□□ 0.11
RBM39-223ENST00000463004 POGKQ9P215 609 aa15.73■□□□□ 0.11
RBM39-223ENST00000463004 WASHC2CQ9Y4E1 1318 aa15.72■□□□□ 0.11
RBM39-223ENST00000463004 ROCK1Q13464 1354 aa15.71■□□□□ 0.11
RBM39-223ENST00000463004 HFM1A2PYH4 1435 aa15.71■□□□□ 0.11
RBM39-223ENST00000463004 L3MBTL2Q969R5 705 aa15.71■□□□□ 0.1
RBM39-223ENST00000463004 ADAMTS12P58397 1594 aa15.7■□□□□ 0.1
RBM39-223ENST00000463004 HSPA5P11021 654 aaKnown RBP15.7■□□□□ 0.1
RBM39-223ENST00000463004 HIRIP3Q9BW71 556 aaPredicted RBP15.7■□□□□ 0.1
RBM39-223ENST00000463004 PLPPR3Q6T4P5 718 aa15.7■□□□□ 0.1
RBM39-223ENST00000463004 UGGT2Q9NYU1 1516 aa15.68■□□□□ 0.1
RBM39-223ENST00000463004 KIF21AQ7Z4S6 1674 aa15.67■□□□□ 0.1
RBM39-223ENST00000463004 CTTNBP2Q8WZ74 1663 aa15.67■□□□□ 0.1
RBM39-223ENST00000463004 FOXD1Q16676 465 aa15.65■□□□□ 0.1
RBM39-223ENST00000463004 C9orf84Q5VXU9 1444 aa15.64■□□□□ 0.09
RBM39-223ENST00000463004 NUDCQ9Y266 331 aa15.63■□□□□ 0.09
RBM39-223ENST00000463004 MYT1Q01538 1121 aa15.63■□□□□ 0.09
RBM39-223ENST00000463004 PNNQ9H307 717 aaKnown RBP15.63■□□□□ 0.09
RBM39-223ENST00000463004 KIF14Q15058 1648 aa15.63■□□□□ 0.09
RBM39-223ENST00000463004 ZNF644Q9H582 1327 aaPredicted RBP15.63■□□□□ 0.09
RBM39-223ENST00000463004 DAPK1P53355 1430 aa15.63■□□□□ 0.09
RBM39-223ENST00000463004 ABCA5Q8WWZ7 1642 aa15.62■□□□□ 0.09
RBM39-223ENST00000463004 RALBP1Q15311 655 aa15.61■□□□□ 0.09
RBM39-223ENST00000463004 FAM69CQ0P6D2 419 aa15.61■□□□□ 0.09
RBM39-223ENST00000463004 MLECQ14165 292 aa15.61■□□□□ 0.09
RBM39-223ENST00000463004 CDK13Q14004 1512 aaKnown RBP15.61■□□□□ 0.09
RBM39-223ENST00000463004 VGFO15240 615 aaPredicted RBP15.6■□□□□ 0.09
RBM39-223ENST00000463004 AKNAQ7Z591 1439 aa15.58■□□□□ 0.09
RBM39-223ENST00000463004 PLB1Q6P1J6 1458 aa15.58■□□□□ 0.09
RBM39-223ENST00000463004 KTN1Q86UP2 1357 aaKnown RBP15.58■□□□□ 0.09
RBM39-223ENST00000463004 CCDC141Q6ZP82 1450 aa15.58■□□□□ 0.08
RBM39-223ENST00000463004 C14orf37Q86TY3 774 aa15.58■□□□□ 0.08
RBM39-223ENST00000463004 EIF4G3O43432 1585 aaKnown RBP15.57■□□□□ 0.08
RBM39-223ENST00000463004 EID1Q9Y6B2 187 aa15.57■□□□□ 0.08
RBM39-223ENST00000463004 NUP160Q12769 1436 aa15.57■□□□□ 0.08
RBM39-223ENST00000463004 RAPGEF6Q8TEU7 1601 aa15.56■□□□□ 0.08
RBM39-223ENST00000463004 PTPN23Q9H3S7 1636 aa15.55■□□□□ 0.08
RBM39-223ENST00000463004 KIAA1107Q9UPP5 1409 aa15.55■□□□□ 0.08
RBM39-223ENST00000463004 HDGFL2Q7Z4V5 671 aaPredicted RBP15.55■□□□□ 0.08
RBM39-223ENST00000463004 FKBP8Q14318 412 aa15.54■□□□□ 0.08
RBM39-223ENST00000463004 KIAA0556O60303 1618 aa15.53■□□□□ 0.08
RBM39-223ENST00000463004 PBRM1Q86U86 1689 aa15.53■□□□□ 0.08
RBM39-223ENST00000463004 NAIPQ13075 1403 aa15.52■□□□□ 0.08
RBM39-223ENST00000463004 SRPK2P78362 688 aaKnown RBP15.52■□□□□ 0.07
RBM39-223ENST00000463004 CAMSAP2Q08AD1 1489 aa15.52■□□□□ 0.07
RBM39-223ENST00000463004 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.51■□□□□ 0.07
RBM39-223ENST00000463004 TARBP1Q13395 1621 aaKnown RBP15.49■□□□□ 0.07
RBM39-223ENST00000463004 SCAPERQ9BY12 1400 aa15.49■□□□□ 0.07
RBM39-223ENST00000463004 MAPK8IP3Q9UPT6 1336 aa15.49■□□□□ 0.07
RBM39-223ENST00000463004 TERF2IPQ9NYB0 399 aa15.49■□□□□ 0.07
RBM39-223ENST00000463004 AFAP1Q8N556 730 aa15.48■□□□□ 0.07
RBM39-223ENST00000463004 ARHGEF11O15085 1522 aa15.48■□□□□ 0.07
RBM39-223ENST00000463004 USP47Q96K76 1375 aa15.48■□□□□ 0.07
RBM39-223ENST00000463004 MORC1Q86VD1 984 aa15.47■□□□□ 0.07
RBM39-223ENST00000463004 ABCC5O15440 1437 aa15.47■□□□□ 0.07
RBM39-223ENST00000463004 ITSN2Q9NZM3 1697 aa15.47■□□□□ 0.07
RBM39-223ENST00000463004 CFAP43Q8NDM7 1665 aa15.46■□□□□ 0.07
RBM39-223ENST00000463004 NUP153P49790 1475 aaKnown RBP15.45■□□□□ 0.06
RBM39-223ENST00000463004 CD109Q6YHK3 1445 aa15.45■□□□□ 0.06
RBM39-223ENST00000463004 CCDC136Q96JN2 1154 aa15.45■□□□□ 0.06
RBM39-223ENST00000463004 MS4A1P11836 297 aa15.44■□□□□ 0.06
RBM39-223ENST00000463004 ATP10BO94823 1461 aa15.44■□□□□ 0.06
RBM39-223ENST00000463004 SALL2Q9Y467 1007 aaPredicted RBP15.44■□□□□ 0.06
RBM39-223ENST00000463004 CC2D1BQ5T0F9 858 aaKnown RBP15.43■□□□□ 0.06
RBM39-223ENST00000463004 CHMP4BQ9H444 224 aaKnown RBP15.43■□□□□ 0.06
RBM39-223ENST00000463004 HAP1P54257 671 aaPredicted RBP15.43■□□□□ 0.06
RBM39-223ENST00000463004 NLRP13Q86W25 1043 aa15.43■□□□□ 0.06
RBM39-223ENST00000463004 GPATCH8Q9UKJ3 1502 aaKnown RBP15.42■□□□□ 0.06
RBM39-223ENST00000463004 SLC52A1Q9NWF4 448 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms