RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 ARSIQ5FYB1 569 aa7.73□□□□□ -1.17
CD46-210ENST00000462968 ANKRD13DQ6ZTN6 518 aa7.72□□□□□ -1.17
CD46-210ENST00000462968 ZNF316A6NFI3 1004 aaPredicted RBP7.71□□□□□ -1.18
CD46-210ENST00000462968 LSM11P83369 360 aaKnown RBP eCLIP7.71□□□□□ -1.18
CD46-210ENST00000462968 KHSRPQ92945 711 aaKnown RBP eCLIP7.69□□□□□ -1.185e-7■■□□□ 14.1
CD46-210ENST00000462968 PHF8Q9UPP1 1060 aa7.69□□□□□ -1.18
CD46-210ENST00000462968 RNF25Q96BH1 459 aaPredicted RBP7.67□□□□□ -1.18
CD46-210ENST00000462968 RIOK3O14730 519 aaKnown RBP7.66□□□□□ -1.18
CD46-210ENST00000462968 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.65□□□□□ -1.18
CD46-210ENST00000462968 PBX2P40425 430 aa7.65□□□□□ -1.18
CD46-210ENST00000462968 POTEEQ6S8J3 1075 aa7.65□□□□□ -1.18
CD46-210ENST00000462968 ZFP91Q96JP5 570 aaPredicted RBP7.65□□□□□ -1.18
CD46-210ENST00000462968 VGFO15240 615 aaPredicted RBP7.63□□□□□ -1.19
CD46-210ENST00000462968 FBXO22Q8NEZ5 403 aa7.63□□□□□ -1.19
CD46-210ENST00000462968 KIF3CO14782 793 aa7.62□□□□□ -1.19
CD46-210ENST00000462968 PLA2G2EQ9NZK7 142 aa7.62□□□□□ -1.19
CD46-210ENST00000462968 NUDT7P0C024 238 aa7.6□□□□□ -1.19
CD46-210ENST00000462968 NLRP6P59044 892 aa7.6□□□□□ -1.19
CD46-210ENST00000462968 HCSTQ9UBK5 93 aa7.6□□□□□ -1.19
CD46-210ENST00000462968 LHX6Q9UPM6 363 aa7.59□□□□□ -1.19
CD46-210ENST00000462968 SLC34A2O95436 690 aa7.58□□□□□ -1.2
CD46-210ENST00000462968 AXIN2Q9Y2T1 843 aa7.58□□□□□ -1.2
CD46-210ENST00000462968 C2orf72A6NCS6 295 aa7.57□□□□□ -1.2
CD46-210ENST00000462968 PCDHGA4Q9Y5G9 962 aa7.57□□□□□ -1.2
CD46-210ENST00000462968 MFRPQ9BY79 579 aa7.55□□□□□ -1.2
CD46-210ENST00000462968 ADGRD1Q6QNK2 874 aa7.54□□□□□ -1.2
CD46-210ENST00000462968 KDM4FA0A1W2PPD8 638 aa7.52□□□□□ -1.21
CD46-210ENST00000462968 ARHGAP33O14559 1287 aa7.52□□□□□ -1.21
CD46-210ENST00000462968 BCL11BQ9C0K0 894 aaPredicted RBP7.52□□□□□ -1.21
CD46-210ENST00000462968 HRO43593 1189 aa7.51□□□□□ -1.21
CD46-210ENST00000462968 TK2O00142 265 aa7.5□□□□□ -1.21
CD46-210ENST00000462968 PSDA5PKW4 1024 aaPredicted RBP7.48□□□□□ -1.21
CD46-210ENST00000462968 STK24Q9Y6E0 443 aa7.48□□□□□ -1.21
CD46-210ENST00000462968 DMRTA1Q5VZB9 504 aa7.47□□□□□ -1.21
CD46-210ENST00000462968 TMC2Q8TDI7 906 aa7.46□□□□□ -1.22
CD46-210ENST00000462968 TAOK2Q9UL54 1235 aa7.46□□□□□ -1.22
CD46-210ENST00000462968 PSEN2P49810 448 aa7.43□□□□□ -1.22
CD46-210ENST00000462968 PTCD2Q8WV60 388 aaKnown RBP7.43□□□□□ -1.22
CD46-210ENST00000462968 KCTD12Q96CX2 325 aaKnown RBP7.42□□□□□ -1.22
CD46-210ENST00000462968 STK25O00506 426 aa7.41□□□□□ -1.22
CD46-210ENST00000462968 NISCHQ9Y2I1 1504 aa7.41□□□□□ -1.22
CD46-210ENST00000462968 RGS20O76081 388 aa7.39□□□□□ -1.23
CD46-210ENST00000462968 IFFO2Q5TF58 517 aa7.39□□□□□ -1.23
CD46-210ENST00000462968 PPP1R37O75864 691 aa7.38□□□□□ -1.23
CD46-210ENST00000462968 PPP4R3BQ5MIZ7 849 aa7.38□□□□□ -1.23
CD46-210ENST00000462968 FOXK1P85037 733 aa7.36□□□□□ -1.23
CD46-210ENST00000462968 VPS9D1Q9Y2B5 631 aa7.36□□□□□ -1.23
CD46-210ENST00000462968 PLPP6Q8IY26 295 aa7.34□□□□□ -1.23
CD46-210ENST00000462968 KCNK17Q96T54 332 aa7.34□□□□□ -1.23
CD46-210ENST00000462968 STAC3Q96MF2 364 aa7.33□□□□□ -1.24
CD46-210ENST00000462968 IRX2Q9BZI1 471 aaPredicted RBP7.33□□□□□ -1.24
CD46-210ENST00000462968 PTPN5P54829 565 aa7.32□□□□□ -1.24
CD46-210ENST00000462968 SLC4A5Q9BY07 1137 aa7.32□□□□□ -1.24
CD46-210ENST00000462968 GPHNQ9NQX3 736 aaPredicted RBP7.32□□□□□ -1.24
CD46-210ENST00000462968 A0A0G2JS52 829 aa7.31□□□□□ -1.24
CD46-210ENST00000462968 BHMG1C9JSJ3 638 aaPredicted RBP7.3□□□□□ -1.24
CD46-210ENST00000462968 TBC1D12O60347 775 aa7.3□□□□□ -1.24
CD46-210ENST00000462968 ECM2O94769 699 aaPredicted RBP7.3□□□□□ -1.24
CD46-210ENST00000462968 DSG2Q14126 1118 aa7.3□□□□□ -1.24
CD46-210ENST00000462968 THSD4Q6ZMP0 1018 aa7.3□□□□□ -1.24
CD46-210ENST00000462968 KCNH8Q96L42 1107 aa7.3□□□□□ -1.24
CD46-210ENST00000462968 RGL2O15211 777 aa7.28□□□□□ -1.24
CD46-210ENST00000462968 BCL2L12Q9HB09 334 aa7.28□□□□□ -1.24
CD46-210ENST00000462968 OXER1Q8TDS5 423 aa7.27□□□□□ -1.25
CD46-210ENST00000462968 PKD2Q13563 968 aa7.25□□□□□ -1.25
CD46-210ENST00000462968 ABCC9O60706 1549 aa7.24□□□□□ -1.25
CD46-210ENST00000462968 ZNF454Q8N9F8 522 aa7.24□□□□□ -1.25
CD46-210ENST00000462968 ZBED2Q9BTP6 218 aa7.24□□□□□ -1.25
CD46-210ENST00000462968 WNT2BQ93097 391 aa7.23□□□□□ -1.25
CD46-210ENST00000462968 FOSBP53539 338 aa7.22□□□□□ -1.25
CD46-210ENST00000462968 PTPREP23469 700 aa7.21□□□□□ -1.26
CD46-210ENST00000462968 MRPL50Q8N5N7 158 aaKnown RBP7.21□□□□□ -1.26
CD46-210ENST00000462968 GOLGA8CPA6NN73 597 aa7.19□□□□□ -1.26
CD46-210ENST00000462968 ITGBL1O95965 494 aaPredicted RBP7.19□□□□□ -1.26
CD46-210ENST00000462968 UPF1Q92900 1129 aaKnown RBP eCLIP7.19□□□□□ -1.264e-12■■□□□ 13.3
CD46-210ENST00000462968 ANO8Q9HCE9 1232 aaPredicted RBP7.18□□□□□ -1.26
CD46-210ENST00000462968 JPH4Q96JJ6 628 aa7.17□□□□□ -1.26
CD46-210ENST00000462968 NBPF3Q9H094 633 aa7.17□□□□□ -1.26
CD46-210ENST00000462968 CRISPLD2Q9H0B8 497 aa7.17□□□□□ -1.26
CD46-210ENST00000462968 ADAM33Q9BZ11 813 aa7.16□□□□□ -1.26
CD46-210ENST00000462968 HS6ST3Q8IZP7 471 aa7.15□□□□□ -1.26
CD46-210ENST00000462968 ZDHHC16Q969W1 377 aa7.14□□□□□ -1.27
CD46-210ENST00000462968 PPP1R15BQ5SWA1 713 aa7.13□□□□□ -1.27
CD46-210ENST00000462968 Q6ZNB5 142 aa7.13□□□□□ -1.27
CD46-210ENST00000462968 RABGEF1Q9UJ41 708 aa7.12□□□□□ -1.27
CD46-210ENST00000462968 LCE2BO14633 110 aa7.11□□□□□ -1.27
CD46-210ENST00000462968 EVI5O60447 810 aa7.11□□□□□ -1.27
CD46-210ENST00000462968 ANKK1Q8NFD2 765 aa7.11□□□□□ -1.27
CD46-210ENST00000462968 PPP1R3GB7ZBB8 358 aa7.1□□□□□ -1.27
CD46-210ENST00000462968 NCKAP5LQ9HCH0 1330 aa7.09□□□□□ -1.27
CD46-210ENST00000462968 BCAMP50895 628 aa7.09□□□□□ -1.27
CD46-210ENST00000462968 NYAP1Q6ZVC0 841 aa7.09□□□□□ -1.27
CD46-210ENST00000462968 LAPTM4BQ86VI4 370 aa7.09□□□□□ -1.27
CD46-210ENST00000462968 SOWAHBA6NEL2 793 aa7.08□□□□□ -1.28
CD46-210ENST00000462968 NKX1-1Q15270 411 aaPredicted RBP7.08□□□□□ -1.28
CD46-210ENST00000462968 PROX2Q3B8N5 592 aa7.08□□□□□ -1.28
CD46-210ENST00000462968 DNAJC5Q9H3Z4 198 aa7.08□□□□□ -1.28
CD46-210ENST00000462968 COL9A1P20849 921 aa7.07□□□□□ -1.28
CD46-210ENST00000462968 KCNC4Q03721 635 aa7.06□□□□□ -1.28
CD46-210ENST00000462968 LAPTM4AQ15012 233 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms