RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 RICTORQ6R327 1708 aa14.15□□□□□ -0.14
LDB1-203ENST00000461873 MAGI2Q86UL8 1455 aa14.15□□□□□ -0.14
LDB1-203ENST00000461873 ZFYVE16Q7Z3T8 1539 aa14.15□□□□□ -0.14
LDB1-203ENST00000461873 PLPPR3Q6T4P5 718 aa14.14□□□□□ -0.15
LDB1-203ENST00000461873 FRMPD1Q5SYB0 1578 aa14.13□□□□□ -0.15
LDB1-203ENST00000461873 MLECQ14165 292 aa14.13□□□□□ -0.15
LDB1-203ENST00000461873 ZNF777Q9ULD5 760 aaPredicted RBP14.13□□□□□ -0.15
LDB1-203ENST00000461873 ARHGEF40Q8TER5 1519 aa14.13□□□□□ -0.15
LDB1-203ENST00000461873 MTUS2Q5JR59 1369 aa14.11□□□□□ -0.15
LDB1-203ENST00000461873 LRRIQ1Q96JM4 1722 aa14.11□□□□□ -0.15
LDB1-203ENST00000461873 ZNF518AQ6AHZ1 1483 aa14.11□□□□□ -0.15
LDB1-203ENST00000461873 ZMYM4Q5VZL5 1548 aa14.1□□□□□ -0.15
LDB1-203ENST00000461873 BCORL1Q5H9F3 1711 aa14.1□□□□□ -0.15
LDB1-203ENST00000461873 ESF1Q9H501 851 aaKnown RBP14.1□□□□□ -0.15
LDB1-203ENST00000461873 PTPRMP28827 1452 aa14.08□□□□□ -0.16
LDB1-203ENST00000461873 AFAP1Q8N556 730 aa14.08□□□□□ -0.16
LDB1-203ENST00000461873 HECW2Q9P2P5 1572 aa14.08□□□□□ -0.16
LDB1-203ENST00000461873 ADAMTSL3P82987 1691 aa14.07□□□□□ -0.16
LDB1-203ENST00000461873 CFDP1Q9UEE9 299 aaPredicted RBP14.07□□□□□ -0.16
LDB1-203ENST00000461873 CCNB3Q8WWL7 1395 aa14.07□□□□□ -0.16
LDB1-203ENST00000461873 CEP162Q5TB80 1403 aa14.07□□□□□ -0.16
LDB1-203ENST00000461873 C9orf84Q5VXU9 1444 aa14.07□□□□□ -0.16
LDB1-203ENST00000461873 YEATS2Q9ULM3 1422 aa14.07□□□□□ -0.16
LDB1-203ENST00000461873 ATP10AO60312 1499 aa14.06□□□□□ -0.16
LDB1-203ENST00000461873 PREX2Q70Z35 1606 aa14.06□□□□□ -0.16
LDB1-203ENST00000461873 CDC42BPBQ9Y5S2 1711 aa14.06□□□□□ -0.16
LDB1-203ENST00000461873 MADDQ8WXG6 1647 aa14.05□□□□□ -0.16
LDB1-203ENST00000461873 RIMS1Q86UR5 1692 aaKnown RBP14.04□□□□□ -0.16
LDB1-203ENST00000461873 FOXD1Q16676 465 aa14.04□□□□□ -0.16
LDB1-203ENST00000461873 CDC42BPAQ5VT25 1732 aa14.02□□□□□ -0.16
LDB1-203ENST00000461873 APLP2Q06481 763 aa14.01□□□□□ -0.17
LDB1-203ENST00000461873 FER1L4A9Z1Z3 1794 aa14.01□□□□□ -0.17
LDB1-203ENST00000461873 PLEKHH2Q8IVE3 1493 aa14□□□□□ -0.17
LDB1-203ENST00000461873 SPAG9O60271 1321 aaKnown RBP14□□□□□ -0.17
LDB1-203ENST00000461873 LOC105371045A0A1W2PR82 267 aa14□□□□□ -0.17
LDB1-203ENST00000461873 ABCC1P33527 1531 aa14□□□□□ -0.17
LDB1-203ENST00000461873 ITSN2Q9NZM3 1697 aa13.99□□□□□ -0.17
LDB1-203ENST00000461873 HNRNPMP52272 730 aaKnown RBP eCLIP13.99□□□□□ -0.17
LDB1-203ENST00000461873 KDM5CP41229 1560 aa13.99□□□□□ -0.17
LDB1-203ENST00000461873 MLH3Q9UHC1 1453 aa13.99□□□□□ -0.17
LDB1-203ENST00000461873 EHBP1L1Q8N3D4 1523 aa13.98□□□□□ -0.17
LDB1-203ENST00000461873 GPATCH8Q9UKJ3 1502 aaKnown RBP13.98□□□□□ -0.17
LDB1-203ENST00000461873 TRAPPC8Q9Y2L5 1435 aa13.97□□□□□ -0.17
LDB1-203ENST00000461873 SYCP2Q9BX26 1530 aa13.95□□□□□ -0.18
LDB1-203ENST00000461873 SUPT6HQ7KZ85 1726 aaKnown RBP13.94□□□□□ -0.18
LDB1-203ENST00000461873 KIAA1107Q9UPP5 1409 aa13.94□□□□□ -0.18
LDB1-203ENST00000461873 DIP2CQ9Y2E4 1556 aa13.94□□□□□ -0.18
LDB1-203ENST00000461873 SAMD9LQ8IVG5 1584 aa13.93□□□□□ -0.18
LDB1-203ENST00000461873 ARHGEF12Q9NZN5 1544 aa13.93□□□□□ -0.18
LDB1-203ENST00000461873 RSPH4AQ5TD94 716 aa13.92□□□□□ -0.18
LDB1-203ENST00000461873 ABCA6Q8N139 1617 aa13.92□□□□□ -0.18
LDB1-203ENST00000461873 REREQ9P2R6 1566 aa13.92□□□□□ -0.18
LDB1-203ENST00000461873 VPS8Q8N3P4 1428 aa13.91□□□□□ -0.18
LDB1-203ENST00000461873 SIGLEC1Q9BZZ2 1709 aa13.91□□□□□ -0.18
LDB1-203ENST00000461873 CEBPAP49715 358 aaPredicted RBP13.91□□□□□ -0.18
LDB1-203ENST00000461873 TSPY4P0CV99 314 aa13.9□□□□□ -0.18
LDB1-203ENST00000461873 TSPY10P0CW01 314 aa13.9□□□□□ -0.18
LDB1-203ENST00000461873 HSPA2P54652 639 aa13.9□□□□□ -0.18
LDB1-203ENST00000461873 KIDINS220Q9ULH0 1771 aa13.9□□□□□ -0.18
LDB1-203ENST00000461873 GGT6Q6P531 493 aa13.89□□□□□ -0.19
LDB1-203ENST00000461873 AGLP35573 1532 aa13.89□□□□□ -0.19
LDB1-203ENST00000461873 ATP7AQ04656 1500 aa13.89□□□□□ -0.19
LDB1-203ENST00000461873 CNTLNQ9NXG0 1405 aa13.89□□□□□ -0.19
LDB1-203ENST00000461873 SETD1BQ9UPS6 1966 aaKnown RBP13.89□□□□□ -0.19
LDB1-203ENST00000461873 TIAM1Q13009 1591 aa13.88□□□□□ -0.19
LDB1-203ENST00000461873 LMTK3Q96Q04 1460 aa13.88□□□□□ -0.19
LDB1-203ENST00000461873 UHRF1BP1Q6BDS2 1440 aa13.88□□□□□ -0.19
LDB1-203ENST00000461873 NCOA2Q15596 1464 aa13.87□□□□□ -0.19
LDB1-203ENST00000461873 ILDR1Q86SU0 546 aaPredicted RBP13.87□□□□□ -0.19
LDB1-203ENST00000461873 DMRT2Q9Y5R5 561 aa13.87□□□□□ -0.19
LDB1-203ENST00000461873 ZNF644Q9H582 1327 aaPredicted RBP13.87□□□□□ -0.19
LDB1-203ENST00000461873 PREX1Q8TCU6 1659 aa13.86□□□□□ -0.19
LDB1-203ENST00000461873 A2MP01023 1474 aa13.86□□□□□ -0.19
LDB1-203ENST00000461873 LRRC9Q6ZRR7 1453 aa13.84□□□□□ -0.19
LDB1-203ENST00000461873 ADGBQ8N7X0 1667 aa13.84□□□□□ -0.19
LDB1-203ENST00000461873 PPP6R1Q9UPN7 881 aa13.83□□□□□ -0.2
LDB1-203ENST00000461873 RTEL1-TNFRSF6BF6WH68 1400 aa13.82□□□□□ -0.2
LDB1-203ENST00000461873 CAMSAP2Q08AD1 1489 aa13.82□□□□□ -0.2
LDB1-203ENST00000461873 CCDC141Q6ZP82 1450 aa13.82□□□□□ -0.2
LDB1-203ENST00000461873 INO80Q9ULG1 1556 aaPredicted RBP13.82□□□□□ -0.2
LDB1-203ENST00000461873 C3P01024 1663 aa13.81□□□□□ -0.2
LDB1-203ENST00000461873 MAP3K1Q13233 1512 aa13.8□□□□□ -0.2
LDB1-203ENST00000461873 KIF3BO15066 747 aa13.8□□□□□ -0.2
LDB1-203ENST00000461873 ZMYM3Q14202 1370 aa13.8□□□□□ -0.2
LDB1-203ENST00000461873 MBD5Q9P267 1494 aa13.79□□□□□ -0.2
LDB1-203ENST00000461873 FBXO41Q8TF61 875 aa13.78□□□□□ -0.2
LDB1-203ENST00000461873 DHX29Q7Z478 1369 aaKnown RBP13.78□□□□□ -0.2
LDB1-203ENST00000461873 MROH2AA6NES4 1674 aa13.78□□□□□ -0.2
LDB1-203ENST00000461873 CLTCQ00610 1675 aaKnown RBP13.78□□□□□ -0.2
LDB1-203ENST00000461873 KANK4Q5T7N3 995 aaPredicted RBP13.77□□□□□ -0.21
LDB1-203ENST00000461873 WASHC2CQ9Y4E1 1318 aa13.77□□□□□ -0.21
LDB1-203ENST00000461873 PLXNC1O60486 1568 aa13.75□□□□□ -0.21
LDB1-203ENST00000461873 NPATQ14207 1427 aa13.75□□□□□ -0.21
LDB1-203ENST00000461873 MYOM3Q5VTT5 1437 aa13.75□□□□□ -0.21
LDB1-203ENST00000461873 MIA2Q96PC5 1412 aa13.75□□□□□ -0.21
LDB1-203ENST00000461873 ARHGEF5Q12774 1597 aa13.75□□□□□ -0.21
LDB1-203ENST00000461873 CERKQ8TCT0 537 aa13.71□□□□□ -0.21
LDB1-203ENST00000461873 KDM5DQ9BY66 1539 aa13.69□□□□□ -0.22
LDB1-203ENST00000461873 PKD2Q13563 968 aa13.68□□□□□ -0.22
LDB1-203ENST00000461873 FAM50AQ14320 339 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms