RNA–Protein interactions for RNA: ENST00000461859.1

TUFT1-205, Transcript of tuftelin 1, humanhuman

TSL 2

Gene TUFT1, Length 749 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUFT1-205ENST00000461859 POTEMA6NI47 508 aa13.02□□□□□ -0.33
TUFT1-205ENST00000461859 SCRIBQ14160 1630 aa13.02□□□□□ -0.33
TUFT1-205ENST00000461859 CHGAP10645 457 aaKnown RBP13□□□□□ -0.33
TUFT1-205ENST00000461859 POTEGQ6S5H5 508 aa13□□□□□ -0.33
TUFT1-205ENST00000461859 SHROOM4Q9ULL8 1493 aa12.97□□□□□ -0.33
TUFT1-205ENST00000461859 LCE2DQ5TA82 110 aaPredicted RBP12.96□□□□□ -0.33
TUFT1-205ENST00000461859 ST18O60284 1047 aa12.95□□□□□ -0.34
TUFT1-205ENST00000461859 RYDENQ9NUL5 291 aaKnown RBP12.94□□□□□ -0.34
TUFT1-205ENST00000461859 DNAJC5Q9H3Z4 198 aa12.92□□□□□ -0.34
TUFT1-205ENST00000461859 PCDH10Q9P2E7 1040 aa12.92□□□□□ -0.34
TUFT1-205ENST00000461859 CC2D2AQ9P2K1 1620 aa12.91□□□□□ -0.34
TUFT1-205ENST00000461859 DOK7Q18PE1 504 aa12.89□□□□□ -0.35
TUFT1-205ENST00000461859 CECR2Q9BXF3 1484 aa12.87□□□□□ -0.35
TUFT1-205ENST00000461859 RIMBP2O15034 1052 aa12.87□□□□□ -0.35
TUFT1-205ENST00000461859 EIF4G1Q04637 1599 aaKnown RBP12.86□□□□□ -0.35
TUFT1-205ENST00000461859 ZNF710Q8N1W2 664 aa12.85□□□□□ -0.35
TUFT1-205ENST00000461859 TMEM92Q6UXU6 159 aa12.83□□□□□ -0.36
TUFT1-205ENST00000461859 HOXB3P14651 431 aaPredicted RBP12.81□□□□□ -0.36
TUFT1-205ENST00000461859 TMC2Q8TDI7 906 aa12.79□□□□□ -0.36
TUFT1-205ENST00000461859 PPP1R37O75864 691 aa12.78□□□□□ -0.36
TUFT1-205ENST00000461859 EMP3P54852 163 aa12.78□□□□□ -0.36
TUFT1-205ENST00000461859 ZSWIM6Q9HCJ5 1215 aa12.78□□□□□ -0.36
TUFT1-205ENST00000461859 NKX1-1Q15270 411 aaPredicted RBP12.77□□□□□ -0.37
TUFT1-205ENST00000461859 MARVELD3Q96A59 401 aa12.76□□□□□ -0.37
TUFT1-205ENST00000461859 C2orf72A6NCS6 295 aa12.74□□□□□ -0.37
TUFT1-205ENST00000461859 KIF3CO14782 793 aa12.74□□□□□ -0.37
TUFT1-205ENST00000461859 HOXB1P14653 301 aaPredicted RBP12.74□□□□□ -0.37
TUFT1-205ENST00000461859 CDAN1Q8IWY9 1227 aa12.73□□□□□ -0.37
TUFT1-205ENST00000461859 FAM205CA6NFA0 338 aa12.65□□□□□ -0.38
TUFT1-205ENST00000461859 GTPBP6O43824 516 aaPredicted RBP12.65□□□□□ -0.38
TUFT1-205ENST00000461859 PLSCR2Q9NRY7 297 aa12.65□□□□□ -0.38
TUFT1-205ENST00000461859 HS3ST6Q96QI5 342 aa12.64□□□□□ -0.39
TUFT1-205ENST00000461859 GPHNQ9NQX3 736 aaPredicted RBP12.64□□□□□ -0.39
TUFT1-205ENST00000461859 ERBB3P21860 1342 aa12.63□□□□□ -0.39
TUFT1-205ENST00000461859 GPR153Q6NV75 609 aa12.63□□□□□ -0.39
TUFT1-205ENST00000461859 SLC34A2O95436 690 aa12.62□□□□□ -0.39
TUFT1-205ENST00000461859 FOXK1P85037 733 aa12.61□□□□□ -0.39
TUFT1-205ENST00000461859 PLCB2Q00722 1185 aa12.61□□□□□ -0.39
TUFT1-205ENST00000461859 BBXQ8WY36 941 aaPredicted RBP12.61□□□□□ -0.39
TUFT1-205ENST00000461859 ARSIQ5FYB1 569 aa12.59□□□□□ -0.39
TUFT1-205ENST00000461859 PLPP6Q8IY26 295 aa12.56□□□□□ -0.4
TUFT1-205ENST00000461859 PDE4AP27815 886 aa12.55□□□□□ -0.4
TUFT1-205ENST00000461859 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.55□□□□□ -0.4
TUFT1-205ENST00000461859 PCDHGA4Q9Y5G9 962 aa12.54□□□□□ -0.4
TUFT1-205ENST00000461859 DSG2Q14126 1118 aa12.53□□□□□ -0.4
TUFT1-205ENST00000461859 VARS2Q5ST30 1063 aaKnown RBP12.53□□□□□ -0.4
TUFT1-205ENST00000461859 CRISPLD2Q9H0B8 497 aa12.53□□□□□ -0.4
TUFT1-205ENST00000461859 BCANQ96GW7 911 aa12.52□□□□□ -0.41
TUFT1-205ENST00000461859 POTEB3A0JP26 581 aa12.51□□□□□ -0.41
TUFT1-205ENST00000461859 TBC1D12O60347 775 aa12.51□□□□□ -0.41
TUFT1-205ENST00000461859 POTEBQ6S5H4 581 aa12.51□□□□□ -0.41
TUFT1-205ENST00000461859 ZNF316A6NFI3 1004 aaPredicted RBP12.5□□□□□ -0.41
TUFT1-205ENST00000461859 PTCD2Q8WV60 388 aaKnown RBP12.5□□□□□ -0.41
TUFT1-205ENST00000461859 NUDT7P0C024 238 aa12.48□□□□□ -0.41
TUFT1-205ENST00000461859 PPP1R15BQ5SWA1 713 aa12.48□□□□□ -0.41
TUFT1-205ENST00000461859 KHSRPQ92945 711 aaKnown RBP eCLIP12.48□□□□□ -0.41
TUFT1-205ENST00000461859 ZNF687Q8N1G0 1237 aa12.47□□□□□ -0.41
TUFT1-205ENST00000461859 NCKAP5LQ9HCH0 1330 aa12.46□□□□□ -0.41
TUFT1-205ENST00000461859 SPRYD3Q8NCJ5 442 aa12.46□□□□□ -0.41
TUFT1-205ENST00000461859 PSDA5PKW4 1024 aaPredicted RBP12.45□□□□□ -0.42
TUFT1-205ENST00000461859 DDX27Q96GQ7 796 aaKnown RBP12.45□□□□□ -0.42
TUFT1-205ENST00000461859 LARP6Q9BRS8 491 aaKnown RBP12.44□□□□□ -0.42
TUFT1-205ENST00000461859 HAP1P54257 671 aaPredicted RBP12.43□□□□□ -0.42
TUFT1-205ENST00000461859 KRTAP3-3Q9BYR6 98 aa12.43□□□□□ -0.42
TUFT1-205ENST00000461859 KRTAP3-2Q9BYR7 98 aa12.43□□□□□ -0.42
TUFT1-205ENST00000461859 LHX6Q9UPM6 363 aa12.41□□□□□ -0.42
TUFT1-205ENST00000461859 MFSD10Q14728 455 aa12.4□□□□□ -0.42
TUFT1-205ENST00000461859 SPNS2Q8IVW8 549 aa12.39□□□□□ -0.43
TUFT1-205ENST00000461859 NCAPD3P42695 1498 aa12.39□□□□□ -0.43
TUFT1-205ENST00000461859 SMARCA4P51532 1647 aa12.38□□□□□ -0.43
TUFT1-205ENST00000461859 OXER1Q8TDS5 423 aa12.38□□□□□ -0.43
TUFT1-205ENST00000461859 ERCC6Q03468 1493 aa12.38□□□□□ -0.43
TUFT1-205ENST00000461859 PBX2P40425 430 aa12.37□□□□□ -0.43
TUFT1-205ENST00000461859 SMARCA2P51531 1590 aa12.37□□□□□ -0.43
TUFT1-205ENST00000461859 ATAD2BQ9ULI0 1458 aa12.36□□□□□ -0.43
TUFT1-205ENST00000461859 PRKCSHP14314 528 aaPredicted RBP12.36□□□□□ -0.43
TUFT1-205ENST00000461859 UPF1Q92900 1129 aaKnown RBP eCLIP12.36□□□□□ -0.43
TUFT1-205ENST00000461859 KDM4FA0A1W2PPD8 638 aa12.34□□□□□ -0.43
TUFT1-205ENST00000461859 PAXIP1Q6ZW49 1069 aaPredicted RBP12.34□□□□□ -0.43
TUFT1-205ENST00000461859 CADPS2Q86UW7 1296 aa12.34□□□□□ -0.43
TUFT1-205ENST00000461859 CFAP44Q96MT7 982 aa12.34□□□□□ -0.43
TUFT1-205ENST00000461859 HMGXB3Q12766 1538 aa12.33□□□□□ -0.44
TUFT1-205ENST00000461859 PPP4R3BQ5MIZ7 849 aa12.32□□□□□ -0.44
TUFT1-205ENST00000461859 VSIG10Q8N0Z9 540 aa12.32□□□□□ -0.44
TUFT1-205ENST00000461859 CUX2O14529 1486 aa12.32□□□□□ -0.44
TUFT1-205ENST00000461859 MMRN1Q13201 1228 aa12.31□□□□□ -0.44
TUFT1-205ENST00000461859 BAZ1AQ9NRL2 1556 aaPredicted RBP12.3□□□□□ -0.44
TUFT1-205ENST00000461859 BAZ1BQ9UIG0 1483 aaKnown RBP12.29□□□□□ -0.44
TUFT1-205ENST00000461859 MAP3K9P80192 1104 aa12.29□□□□□ -0.44
TUFT1-205ENST00000461859 PTGER2P43116 358 aa12.28□□□□□ -0.44
TUFT1-205ENST00000461859 KCNH8Q96L42 1107 aa12.27□□□□□ -0.45
TUFT1-205ENST00000461859 LSM11P83369 360 aaKnown RBP eCLIP12.26□□□□□ -0.45
TUFT1-205ENST00000461859 ARHGAP33O14559 1287 aa12.25□□□□□ -0.45
TUFT1-205ENST00000461859 NESP48681 1621 aa12.25□□□□□ -0.45
TUFT1-205ENST00000461859 EVI5O60447 810 aa12.24□□□□□ -0.45
TUFT1-205ENST00000461859 ANKRD13DQ6ZTN6 518 aa12.24□□□□□ -0.45
TUFT1-205ENST00000461859 CAMK2BQ13554 666 aa12.22□□□□□ -0.45
TUFT1-205ENST00000461859 ANO8Q9HCE9 1232 aaPredicted RBP12.22□□□□□ -0.45
TUFT1-205ENST00000461859 EMILIN3Q9NT22 766 aa12.22□□□□□ -0.45
TUFT1-205ENST00000461859 PEG3Q9GZU2 1588 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms