RNA–Protein interactions for RNA: ENST00000461434.1

PSMD4-207, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 801 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-207ENST00000461434 CFAP74Q9C0B2 1584 aa17.6■□□□□ 0.41
PSMD4-207ENST00000461434 LRRIQ1Q96JM4 1722 aa17.58■□□□□ 0.41
PSMD4-207ENST00000461434 DENND4BO75064 1496 aaPredicted RBP17.58■□□□□ 0.41
PSMD4-207ENST00000461434 CDK11AQ9UQ88 783 aaPredicted RBP17.58■□□□□ 0.4
PSMD4-207ENST00000461434 KIF14Q15058 1648 aa17.58■□□□□ 0.4
PSMD4-207ENST00000461434 PCF11O94913 1555 aaKnown RBP17.57■□□□□ 0.4
PSMD4-207ENST00000461434 ARID4BQ4LE39 1312 aaPredicted RBP17.57■□□□□ 0.4
PSMD4-207ENST00000461434 RICTORQ6R327 1708 aa17.55■□□□□ 0.4
PSMD4-207ENST00000461434 MYO5CQ9NQX4 1742 aa17.54■□□□□ 0.4
PSMD4-207ENST00000461434 TROQ12816 1431 aaPredicted RBP17.54■□□□□ 0.4
PSMD4-207ENST00000461434 PLCH2O75038 1416 aa17.53■□□□□ 0.4
PSMD4-207ENST00000461434 CLIP1P30622 1438 aa17.53■□□□□ 0.4
PSMD4-207ENST00000461434 ARHGEF40Q8TER5 1519 aa17.52■□□□□ 0.4
PSMD4-207ENST00000461434 CASKIN1Q8WXD9 1431 aa17.51■□□□□ 0.39
PSMD4-207ENST00000461434 SCAPERQ9BY12 1400 aa17.5■□□□□ 0.39
PSMD4-207ENST00000461434 HECW2Q9P2P5 1572 aa17.49■□□□□ 0.39
PSMD4-207ENST00000461434 ARHGAP5Q13017 1502 aa17.49■□□□□ 0.39
PSMD4-207ENST00000461434 EFCAB2Q5VUJ9 269 aa17.48■□□□□ 0.39
PSMD4-207ENST00000461434 CCDC18Q5T9S5 1454 aa17.48■□□□□ 0.39
PSMD4-207ENST00000461434 YEATS2Q9ULM3 1422 aa17.47■□□□□ 0.39
PSMD4-207ENST00000461434 ZFYVE16Q7Z3T8 1539 aa17.47■□□□□ 0.39
PSMD4-207ENST00000461434 BCORL1Q5H9F3 1711 aa17.47■□□□□ 0.39
PSMD4-207ENST00000461434 ADAMTSL3P82987 1691 aa17.47■□□□□ 0.39
PSMD4-207ENST00000461434 POGZQ7Z3K3 1410 aa17.47■□□□□ 0.39
PSMD4-207ENST00000461434 MADDQ8WXG6 1647 aa17.46■□□□□ 0.39
PSMD4-207ENST00000461434 ZMYM4Q5VZL5 1548 aa17.46■□□□□ 0.39
PSMD4-207ENST00000461434 FYCO1Q9BQS8 1478 aa17.45■□□□□ 0.38
PSMD4-207ENST00000461434 MYT1LQ9UL68 1186 aa17.45■□□□□ 0.38
PSMD4-207ENST00000461434 MLECQ14165 292 aa17.44■□□□□ 0.38
PSMD4-207ENST00000461434 PTPRMP28827 1452 aa17.43■□□□□ 0.38
PSMD4-207ENST00000461434 RIMS1Q86UR5 1692 aaKnown RBP17.42■□□□□ 0.38
PSMD4-207ENST00000461434 SIGLEC1Q9BZZ2 1709 aa17.41■□□□□ 0.38
PSMD4-207ENST00000461434 CDC42BPBQ9Y5S2 1711 aa17.41■□□□□ 0.38
PSMD4-207ENST00000461434 DMRT2Q9Y5R5 561 aa17.41■□□□□ 0.38
PSMD4-207ENST00000461434 PREX2Q70Z35 1606 aa17.39■□□□□ 0.38
PSMD4-207ENST00000461434 MAGI2Q86UL8 1455 aa17.39■□□□□ 0.37
PSMD4-207ENST00000461434 HOXD11P31277 338 aaPredicted RBP17.39■□□□□ 0.37
PSMD4-207ENST00000461434 AFAP1Q8N556 730 aa17.39■□□□□ 0.37
PSMD4-207ENST00000461434 ZNF777Q9ULD5 760 aaPredicted RBP17.38■□□□□ 0.37
PSMD4-207ENST00000461434 CDC42BPAQ5VT25 1732 aa17.37■□□□□ 0.37
PSMD4-207ENST00000461434 CEP162Q5TB80 1403 aa17.37■□□□□ 0.37
PSMD4-207ENST00000461434 ZNF518AQ6AHZ1 1483 aa17.37■□□□□ 0.37
PSMD4-207ENST00000461434 C9orf84Q5VXU9 1444 aa17.35■□□□□ 0.37
PSMD4-207ENST00000461434 ATP10AO60312 1499 aa17.35■□□□□ 0.37
PSMD4-207ENST00000461434 ABCC1P33527 1531 aa17.34■□□□□ 0.37
PSMD4-207ENST00000461434 ITSN2Q9NZM3 1697 aa17.33■□□□□ 0.37
PSMD4-207ENST00000461434 FER1L4A9Z1Z3 1794 aa17.33■□□□□ 0.36
PSMD4-207ENST00000461434 KDM5CP41229 1560 aa17.32■□□□□ 0.36
PSMD4-207ENST00000461434 ARHGEF12Q9NZN5 1544 aa17.32■□□□□ 0.36
PSMD4-207ENST00000461434 TRAPPC8Q9Y2L5 1435 aa17.32■□□□□ 0.36
PSMD4-207ENST00000461434 MTUS2Q5JR59 1369 aa17.32■□□□□ 0.36
PSMD4-207ENST00000461434 LOC105371045A0A1W2PR82 267 aa17.32■□□□□ 0.36
PSMD4-207ENST00000461434 DIP2CQ9Y2E4 1556 aa17.3■□□□□ 0.36
PSMD4-207ENST00000461434 ABCA6Q8N139 1617 aa17.29■□□□□ 0.36
PSMD4-207ENST00000461434 GPATCH8Q9UKJ3 1502 aaKnown RBP17.29■□□□□ 0.36
PSMD4-207ENST00000461434 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
PSMD4-207ENST00000461434 SAMD9LQ8IVG5 1584 aa17.28■□□□□ 0.36
PSMD4-207ENST00000461434 SYCP2Q9BX26 1530 aa17.28■□□□□ 0.36
PSMD4-207ENST00000461434 SLC4A2P04920 1241 aa17.28■□□□□ 0.36
PSMD4-207ENST00000461434 HNRNPMP52272 730 aaKnown RBP eCLIP17.26■□□□□ 0.35
PSMD4-207ENST00000461434 CFDP1Q9UEE9 299 aaPredicted RBP17.26■□□□□ 0.35
PSMD4-207ENST00000461434 EHBP1L1Q8N3D4 1523 aa17.25■□□□□ 0.35
PSMD4-207ENST00000461434 MLH3Q9UHC1 1453 aa17.24■□□□□ 0.35
PSMD4-207ENST00000461434 LMTK3Q96Q04 1460 aa17.24■□□□□ 0.35
PSMD4-207ENST00000461434 KIDINS220Q9ULH0 1771 aa17.23■□□□□ 0.35
PSMD4-207ENST00000461434 CEBPAP49715 358 aaPredicted RBP17.23■□□□□ 0.35
PSMD4-207ENST00000461434 HSPA2P54652 639 aa17.23■□□□□ 0.35
PSMD4-207ENST00000461434 TIAM1Q13009 1591 aa17.22■□□□□ 0.35
PSMD4-207ENST00000461434 SPAG9O60271 1321 aaKnown RBP17.21■□□□□ 0.35
PSMD4-207ENST00000461434 ILDR1Q86SU0 546 aaPredicted RBP17.2■□□□□ 0.34
PSMD4-207ENST00000461434 ESF1Q9H501 851 aaKnown RBP17.19■□□□□ 0.34
PSMD4-207ENST00000461434 REREQ9P2R6 1566 aa17.19■□□□□ 0.34
PSMD4-207ENST00000461434 ZNF644Q9H582 1327 aaPredicted RBP17.19■□□□□ 0.34
PSMD4-207ENST00000461434 PLEKHH2Q8IVE3 1493 aa17.18■□□□□ 0.34
PSMD4-207ENST00000461434 ATP7AQ04656 1500 aa17.16■□□□□ 0.34
PSMD4-207ENST00000461434 SUPT6HQ7KZ85 1726 aaKnown RBP17.16■□□□□ 0.34
PSMD4-207ENST00000461434 VPS8Q8N3P4 1428 aa17.16■□□□□ 0.34
PSMD4-207ENST00000461434 KIAA1107Q9UPP5 1409 aa17.15■□□□□ 0.34
PSMD4-207ENST00000461434 NCOA2Q15596 1464 aa17.15■□□□□ 0.34
PSMD4-207ENST00000461434 AGLP35573 1532 aa17.15■□□□□ 0.34
PSMD4-207ENST00000461434 INO80Q9ULG1 1556 aaPredicted RBP17.13■□□□□ 0.33
PSMD4-207ENST00000461434 C3P01024 1663 aa17.12■□□□□ 0.33
PSMD4-207ENST00000461434 PREX1Q8TCU6 1659 aa17.12■□□□□ 0.33
PSMD4-207ENST00000461434 A2MP01023 1474 aa17.1■□□□□ 0.33
PSMD4-207ENST00000461434 CAMSAP2Q08AD1 1489 aa17.09■□□□□ 0.33
PSMD4-207ENST00000461434 LRRC9Q6ZRR7 1453 aa17.08■□□□□ 0.32
PSMD4-207ENST00000461434 MBD5Q9P267 1494 aa17.08■□□□□ 0.32
PSMD4-207ENST00000461434 UHRF1BP1Q6BDS2 1440 aa17.08■□□□□ 0.32
PSMD4-207ENST00000461434 GGT6Q6P531 493 aa17.07■□□□□ 0.32
PSMD4-207ENST00000461434 KANK4Q5T7N3 995 aaPredicted RBP17.06■□□□□ 0.32
PSMD4-207ENST00000461434 ADGBQ8N7X0 1667 aa17.06■□□□□ 0.32
PSMD4-207ENST00000461434 PLXNC1O60486 1568 aa17.06■□□□□ 0.32
PSMD4-207ENST00000461434 CNTLNQ9NXG0 1405 aa17.05■□□□□ 0.32
PSMD4-207ENST00000461434 CLTCQ00610 1675 aaKnown RBP17.05■□□□□ 0.32
PSMD4-207ENST00000461434 SETD1BQ9UPS6 1966 aaKnown RBP17.05■□□□□ 0.32
PSMD4-207ENST00000461434 CCDC141Q6ZP82 1450 aa17.05■□□□□ 0.32
PSMD4-207ENST00000461434 MYCNP04198 464 aaPredicted RBP17.01■□□□□ 0.31
PSMD4-207ENST00000461434 APLP2Q06481 763 aa17.01■□□□□ 0.31
PSMD4-207ENST00000461434 ZMYM3Q14202 1370 aa17.01■□□□□ 0.31
PSMD4-207ENST00000461434 MROH2AA6NES4 1674 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms