RNA–Protein interactions for RNA: ENST00000461249.1

GPN1-206, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best)

Gene GPN1, Length 969 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-206ENST00000461249 ATXN8OSP0DMR3 200 aa12.66□□□□□ -0.38
GPN1-206ENST00000461249 MAGI3Q5TCQ9 1506 aa12.64□□□□□ -0.39
GPN1-206ENST00000461249 MTUS2Q5JR59 1369 aa12.64□□□□□ -0.39
GPN1-206ENST00000461249 TIAM1Q13009 1591 aa12.64□□□□□ -0.39
GPN1-206ENST00000461249 MAP3K1Q13233 1512 aa12.62□□□□□ -0.39
GPN1-206ENST00000461249 CFAP43Q8NDM7 1665 aa12.62□□□□□ -0.39
GPN1-206ENST00000461249 KANK4Q5T7N3 995 aaPredicted RBP12.62□□□□□ -0.39
GPN1-206ENST00000461249 CD109Q6YHK3 1445 aa12.62□□□□□ -0.39
GPN1-206ENST00000461249 TSPOAP1O95153 1857 aa12.61□□□□□ -0.39
GPN1-206ENST00000461249 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.61□□□□□ -0.39
GPN1-206ENST00000461249 KIF14Q15058 1648 aa12.6□□□□□ -0.39
GPN1-206ENST00000461249 ABCA9Q8IUA7 1624 aa12.6□□□□□ -0.39
GPN1-206ENST00000461249 MAP3K4Q9Y6R4 1608 aa12.6□□□□□ -0.39
GPN1-206ENST00000461249 LRRC9Q6ZRR7 1453 aa12.59□□□□□ -0.39
GPN1-206ENST00000461249 EHBP1L1Q8N3D4 1523 aa12.58□□□□□ -0.4
GPN1-206ENST00000461249 TTC37Q6PGP7 1564 aa12.57□□□□□ -0.4
GPN1-206ENST00000461249 PPRC1Q5VV67 1664 aaKnown RBP12.56□□□□□ -0.4
GPN1-206ENST00000461249 PLCH2O75038 1416 aa12.54□□□□□ -0.4
GPN1-206ENST00000461249 TEX14Q8IWB6 1497 aa12.54□□□□□ -0.4
GPN1-206ENST00000461249 PPARGC1BQ86YN6 1023 aaKnown RBP12.54□□□□□ -0.4
GPN1-206ENST00000461249 CCNB3Q8WWL7 1395 aa12.54□□□□□ -0.4
GPN1-206ENST00000461249 SUPT6HQ7KZ85 1726 aaKnown RBP12.54□□□□□ -0.4
GPN1-206ENST00000461249 NCOA2Q15596 1464 aa12.53□□□□□ -0.4
GPN1-206ENST00000461249 EFCAB2Q5VUJ9 269 aa12.53□□□□□ -0.4
GPN1-206ENST00000461249 MYO5CQ9NQX4 1742 aa12.52□□□□□ -0.41
GPN1-206ENST00000461249 GPATCH8Q9UKJ3 1502 aaKnown RBP12.52□□□□□ -0.41
GPN1-206ENST00000461249 CFDP1Q9UEE9 299 aaPredicted RBP12.51□□□□□ -0.41
GPN1-206ENST00000461249 FANCAO15360 1455 aa12.5□□□□□ -0.41
GPN1-206ENST00000461249 ARHGAP5Q13017 1502 aa12.5□□□□□ -0.41
GPN1-206ENST00000461249 CDC42BPAQ5VT25 1732 aa12.5□□□□□ -0.41
GPN1-206ENST00000461249 CDC42BPBQ9Y5S2 1711 aa12.5□□□□□ -0.41
GPN1-206ENST00000461249 ARAP3Q8WWN8 1544 aa12.49□□□□□ -0.41
GPN1-206ENST00000461249 NEO1Q92859 1461 aa12.49□□□□□ -0.41
GPN1-206ENST00000461249 AKNAQ7Z591 1439 aa12.49□□□□□ -0.41
GPN1-206ENST00000461249 PHLDB1Q86UU1 1377 aa12.49□□□□□ -0.41
GPN1-206ENST00000461249 ZNF777Q9ULD5 760 aaPredicted RBP12.49□□□□□ -0.41
GPN1-206ENST00000461249 PREX2Q70Z35 1606 aa12.48□□□□□ -0.41
GPN1-206ENST00000461249 CFAP74Q9C0B2 1584 aa12.46□□□□□ -0.42
GPN1-206ENST00000461249 COL17A1Q9UMD9 1497 aaPredicted RBP12.46□□□□□ -0.42
GPN1-206ENST00000461249 ITSN2Q9NZM3 1697 aa12.45□□□□□ -0.42
GPN1-206ENST00000461249 ZNF644Q9H582 1327 aaPredicted RBP12.45□□□□□ -0.42
GPN1-206ENST00000461249 MYOM3Q5VTT5 1437 aa12.45□□□□□ -0.42
GPN1-206ENST00000461249 SCAPERQ9BY12 1400 aa12.45□□□□□ -0.42
GPN1-206ENST00000461249 KDM6BO15054 1643 aa12.44□□□□□ -0.42
GPN1-206ENST00000461249 RAPGEF3O95398 923 aa12.44□□□□□ -0.42
GPN1-206ENST00000461249 ADGRL1O94910 1474 aa12.44□□□□□ -0.42
GPN1-206ENST00000461249 HNRNPMP52272 730 aaKnown RBP eCLIP12.43□□□□□ -0.42
GPN1-206ENST00000461249 DENND4BO75064 1496 aaPredicted RBP12.42□□□□□ -0.42
GPN1-206ENST00000461249 MIA2Q96PC5 1412 aa12.42□□□□□ -0.42
GPN1-206ENST00000461249 SAMD9LQ8IVG5 1584 aa12.42□□□□□ -0.42
GPN1-206ENST00000461249 ARHGEF12Q9NZN5 1544 aa12.41□□□□□ -0.42
GPN1-206ENST00000461249 PLEKHH2Q8IVE3 1493 aa12.4□□□□□ -0.42
GPN1-206ENST00000461249 KIAA1107Q9UPP5 1409 aa12.4□□□□□ -0.42
GPN1-206ENST00000461249 AFAP1Q8N556 730 aa12.4□□□□□ -0.42
GPN1-206ENST00000461249 FGD6Q6ZV73 1430 aa12.39□□□□□ -0.43
GPN1-206ENST00000461249 ABCC1P33527 1531 aa12.39□□□□□ -0.43
GPN1-206ENST00000461249 CAMSAP2Q08AD1 1489 aa12.39□□□□□ -0.43
GPN1-206ENST00000461249 POGZQ7Z3K3 1410 aa12.38□□□□□ -0.43
GPN1-206ENST00000461249 TRAPPC8Q9Y2L5 1435 aa12.38□□□□□ -0.43
GPN1-206ENST00000461249 SYCP2Q9BX26 1530 aa12.37□□□□□ -0.43
GPN1-206ENST00000461249 PTPN23Q9H3S7 1636 aa12.37□□□□□ -0.43
GPN1-206ENST00000461249 FAM50AQ14320 339 aaKnown RBP12.37□□□□□ -0.43
GPN1-206ENST00000461249 RSPH4AQ5TD94 716 aa12.37□□□□□ -0.43
GPN1-206ENST00000461249 MBD5Q9P267 1494 aa12.37□□□□□ -0.43
GPN1-206ENST00000461249 RICTORQ6R327 1708 aa12.37□□□□□ -0.43
GPN1-206ENST00000461249 FRMPD1Q5SYB0 1578 aa12.36□□□□□ -0.43
GPN1-206ENST00000461249 MYT1LQ9UL68 1186 aa12.36□□□□□ -0.43
GPN1-206ENST00000461249 ATF5Q9Y2D1 282 aaPredicted RBP12.36□□□□□ -0.43
GPN1-206ENST00000461249 TCOF1Q13428 1488 aaKnown RBP12.35□□□□□ -0.43
GPN1-206ENST00000461249 ZNF518AQ6AHZ1 1483 aa12.35□□□□□ -0.43
GPN1-206ENST00000461249 SPAG9O60271 1321 aaKnown RBP12.34□□□□□ -0.43
GPN1-206ENST00000461249 TSPY4P0CV99 314 aa12.33□□□□□ -0.44
GPN1-206ENST00000461249 TSPY10P0CW01 314 aa12.33□□□□□ -0.44
GPN1-206ENST00000461249 KDM5CP41229 1560 aa12.32□□□□□ -0.44
GPN1-206ENST00000461249 ARHGEF5Q12774 1597 aa12.32□□□□□ -0.44
GPN1-206ENST00000461249 CCDC141Q6ZP82 1450 aa12.32□□□□□ -0.44
GPN1-206ENST00000461249 ZMYM4Q5VZL5 1548 aa12.32□□□□□ -0.44
GPN1-206ENST00000461249 RRBP1Q9P2E9 1410 aaKnown RBP12.31□□□□□ -0.44
GPN1-206ENST00000461249 MAGI2Q86UL8 1455 aa12.31□□□□□ -0.44
GPN1-206ENST00000461249 MLH3Q9UHC1 1453 aa12.31□□□□□ -0.44
GPN1-206ENST00000461249 ABCC5O15440 1437 aa12.3□□□□□ -0.44
GPN1-206ENST00000461249 YEATS2Q9ULM3 1422 aa12.29□□□□□ -0.44
GPN1-206ENST00000461249 ZFYVE16Q7Z3T8 1539 aa12.29□□□□□ -0.44
GPN1-206ENST00000461249 HECW2Q9P2P5 1572 aa12.29□□□□□ -0.44
GPN1-206ENST00000461249 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.29□□□□□ -0.44
GPN1-206ENST00000461249 DAPK1P53355 1430 aa12.28□□□□□ -0.44
GPN1-206ENST00000461249 ITGAEP38570 1179 aa12.28□□□□□ -0.44
GPN1-206ENST00000461249 CHIC2Q9UKJ5 165 aa12.28□□□□□ -0.44
GPN1-206ENST00000461249 KIDINS220Q9ULH0 1771 aa12.28□□□□□ -0.44
GPN1-206ENST00000461249 RTEL1-TNFRSF6BF6WH68 1400 aa12.28□□□□□ -0.44
GPN1-206ENST00000461249 DNMT1P26358 1616 aaKnown RBP12.27□□□□□ -0.44
GPN1-206ENST00000461249 ATP10AO60312 1499 aa12.27□□□□□ -0.45
GPN1-206ENST00000461249 ATP7AQ04656 1500 aa12.27□□□□□ -0.45
GPN1-206ENST00000461249 C9orf84Q5VXU9 1444 aa12.26□□□□□ -0.45
GPN1-206ENST00000461249 ARHGEF40Q8TER5 1519 aa12.26□□□□□ -0.45
GPN1-206ENST00000461249 INO80Q9ULG1 1556 aaPredicted RBP12.26□□□□□ -0.45
GPN1-206ENST00000461249 PTPRKQ15262 1439 aa12.24□□□□□ -0.45
GPN1-206ENST00000461249 ARID4BQ4LE39 1312 aaPredicted RBP12.24□□□□□ -0.45
GPN1-206ENST00000461249 ABCA6Q8N139 1617 aa12.24□□□□□ -0.45
GPN1-206ENST00000461249 SHANK2Q9UPX8 1470 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms