RNA–Protein interactions for RNA: ENST00000461099.1

HMG20B-207, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-207ENST00000461099 HECW1Q76N89 1606 aa36.31■■■■□ 3.4
HMG20B-207ENST00000461099 FBXO41Q8TF61 875 aa36.31■■■■□ 3.4
HMG20B-207ENST00000461099 CDK11AQ9UQ88 783 aaPredicted RBP36.31■■■■□ 3.4
HMG20B-207ENST00000461099 SIGLEC1Q9BZZ2 1709 aa36.28■■■■□ 3.4
HMG20B-207ENST00000461099 EFCAB2Q5VUJ9 269 aa36.27■■■■□ 3.4
HMG20B-207ENST00000461099 CHIC1Q5VXU3 224 aa36.23■■■■□ 3.39
HMG20B-207ENST00000461099 PLPPR3Q6T4P5 718 aa36.23■■■■□ 3.39
HMG20B-207ENST00000461099 MLECQ14165 292 aa36.22■■■■□ 3.39
HMG20B-207ENST00000461099 MYO5CQ9NQX4 1742 aa36.22■■■■□ 3.39
HMG20B-207ENST00000461099 ATP10AO60312 1499 aa36.18■■■■□ 3.38
HMG20B-207ENST00000461099 KIF14Q15058 1648 aa36.17■■■■□ 3.38
HMG20B-207ENST00000461099 TROQ12816 1431 aaPredicted RBP36.17■■■■□ 3.38
HMG20B-207ENST00000461099 HSPA2P54652 639 aa36.16■■■■□ 3.38
HMG20B-207ENST00000461099 FER1L4A9Z1Z3 1794 aa36.12■■■■□ 3.37
HMG20B-207ENST00000461099 C9orf84Q5VXU9 1444 aa36.12■■■■□ 3.37
HMG20B-207ENST00000461099 CLIP1P30622 1438 aa36.11■■■■□ 3.37
HMG20B-207ENST00000461099 ZNF518AQ6AHZ1 1483 aa36.09■■■■□ 3.37
HMG20B-207ENST00000461099 ARHGAP5Q13017 1502 aa36.08■■■■□ 3.37
HMG20B-207ENST00000461099 AFAP1Q8N556 730 aa36.07■■■■□ 3.36
HMG20B-207ENST00000461099 ARHGEF12Q9NZN5 1544 aa36.07■■■■□ 3.36
HMG20B-207ENST00000461099 LRRIQ1Q96JM4 1722 aa36.05■■■■□ 3.36
HMG20B-207ENST00000461099 KDM5CP41229 1560 aa36.01■■■■□ 3.35
HMG20B-207ENST00000461099 MYT1LQ9UL68 1186 aa35.98■■■■□ 3.35
HMG20B-207ENST00000461099 CDC42BPBQ9Y5S2 1711 aa35.95■■■■□ 3.35
HMG20B-207ENST00000461099 CASKIN1Q8WXD9 1431 aa35.94■■■■□ 3.34
HMG20B-207ENST00000461099 CEBPAP49715 358 aaPredicted RBP35.94■■■■□ 3.34
HMG20B-207ENST00000461099 CCDC18Q5T9S5 1454 aa35.92■■■■□ 3.34
HMG20B-207ENST00000461099 DIP2CQ9Y2E4 1556 aa35.89■■■■□ 3.34
HMG20B-207ENST00000461099 MLH3Q9UHC1 1453 aa35.89■■■■□ 3.34
HMG20B-207ENST00000461099 PREX1Q8TCU6 1659 aa35.88■■■■□ 3.33
HMG20B-207ENST00000461099 PREX2Q70Z35 1606 aa35.87■■■■□ 3.33
HMG20B-207ENST00000461099 REREQ9P2R6 1566 aa35.87■■■■□ 3.33
HMG20B-207ENST00000461099 TRAPPC8Q9Y2L5 1435 aa35.85■■■■□ 3.33
HMG20B-207ENST00000461099 CERKQ8TCT0 537 aa35.84■■■■□ 3.33
HMG20B-207ENST00000461099 ABCC1P33527 1531 aa35.83■■■■□ 3.33
HMG20B-207ENST00000461099 ABCA6Q8N139 1617 aa35.83■■■■□ 3.33
HMG20B-207ENST00000461099 SETD1BQ9UPS6 1966 aaKnown RBP35.78■■■■□ 3.32
HMG20B-207ENST00000461099 ITSN2Q9NZM3 1697 aa35.78■■■■□ 3.32
HMG20B-207ENST00000461099 FYCO1Q9BQS8 1478 aa35.77■■■■□ 3.32
HMG20B-207ENST00000461099 AGLP35573 1532 aa35.77■■■■□ 3.32
HMG20B-207ENST00000461099 UHRF1BP1Q6BDS2 1440 aa35.76■■■■□ 3.32
HMG20B-207ENST00000461099 CDC42BPAQ5VT25 1732 aa35.76■■■■□ 3.31
HMG20B-207ENST00000461099 ESF1Q9H501 851 aaKnown RBP35.74■■■■□ 3.31
HMG20B-207ENST00000461099 DMRT2Q9Y5R5 561 aa35.73■■■■□ 3.31
HMG20B-207ENST00000461099 KIDINS220Q9ULH0 1771 aa35.71■■■■□ 3.31
HMG20B-207ENST00000461099 STRCQ7RTU9 1775 aa35.69■■■■□ 3.3
HMG20B-207ENST00000461099 C3P01024 1663 aa35.69■■■■□ 3.3
HMG20B-207ENST00000461099 ZNF777Q9ULD5 760 aaPredicted RBP35.68■■■■□ 3.3
HMG20B-207ENST00000461099 GPATCH8Q9UKJ3 1502 aaKnown RBP35.64■■■■□ 3.3
HMG20B-207ENST00000461099 SAMD9LQ8IVG5 1584 aa35.64■■■■□ 3.3
HMG20B-207ENST00000461099 CNTLNQ9NXG0 1405 aa35.61■■■■□ 3.29
HMG20B-207ENST00000461099 HNRNPMP52272 730 aaKnown RBP eCLIP35.6■■■■□ 3.29
HMG20B-207ENST00000461099 SPAG9O60271 1321 aaKnown RBP35.59■■■■□ 3.29
HMG20B-207ENST00000461099 SYCP2Q9BX26 1530 aa35.58■■■■□ 3.29
HMG20B-207ENST00000461099 CFDP1Q9UEE9 299 aaPredicted RBP35.55■■■■□ 3.28
HMG20B-207ENST00000461099 PTPRTO14522 1441 aa35.53■■■■□ 3.28
HMG20B-207ENST00000461099 KIAA1107Q9UPP5 1409 aa35.53■■■■□ 3.28
HMG20B-207ENST00000461099 CCNB3Q8WWL7 1395 aa35.51■■■■□ 3.27
HMG20B-207ENST00000461099 PLEKHH2Q8IVE3 1493 aa35.5■■■■□ 3.27
HMG20B-207ENST00000461099 ZMYM3Q14202 1370 aa35.47■■■■□ 3.27
HMG20B-207ENST00000461099 MTUS2Q5JR59 1369 aa35.47■■■■□ 3.27
HMG20B-207ENST00000461099 ATP7AQ04656 1500 aa35.47■■■■□ 3.27
HMG20B-207ENST00000461099 MROH2AA6NES4 1674 aa35.46■■■■□ 3.27
HMG20B-207ENST00000461099 SUPT6HQ7KZ85 1726 aaKnown RBP35.46■■■■□ 3.27
HMG20B-207ENST00000461099 NPATQ14207 1427 aa35.46■■■■□ 3.27
HMG20B-207ENST00000461099 INO80Q9ULG1 1556 aaPredicted RBP35.42■■■■□ 3.26
HMG20B-207ENST00000461099 NCOA1Q15788 1441 aa35.42■■■■□ 3.26
HMG20B-207ENST00000461099 A2MP01023 1474 aa35.41■■■■□ 3.26
HMG20B-207ENST00000461099 PLXNC1O60486 1568 aa35.39■■■■□ 3.26
HMG20B-207ENST00000461099 GGT6Q6P531 493 aa35.35■■■■□ 3.25
HMG20B-207ENST00000461099 ZNF644Q9H582 1327 aaPredicted RBP35.34■■■■□ 3.25
HMG20B-207ENST00000461099 CLTCQ00610 1675 aaKnown RBP35.34■■■■□ 3.25
HMG20B-207ENST00000461099 CAMSAP1Q5T5Y3 1602 aa35.34■■■■□ 3.25
HMG20B-207ENST00000461099 LTBP4Q8N2S1 1624 aa35.32■■■■□ 3.25
HMG20B-207ENST00000461099 TIAM1Q13009 1591 aa35.31■■■■□ 3.24
HMG20B-207ENST00000461099 PPP6R1Q9UPN7 881 aa35.3■■■■□ 3.24
HMG20B-207ENST00000461099 EHBP1L1Q8N3D4 1523 aa35.28■■■■□ 3.24
HMG20B-207ENST00000461099 MBD5Q9P267 1494 aa35.28■■■■□ 3.24
HMG20B-207ENST00000461099 ADGBQ8N7X0 1667 aa35.27■■■■□ 3.24
HMG20B-207ENST00000461099 PTPRKQ15262 1439 aa35.27■■■■□ 3.24
HMG20B-207ENST00000461099 NCKAP5LQ9HCH0 1330 aa35.26■■■■□ 3.23
HMG20B-207ENST00000461099 CEP162Q5TB80 1403 aa35.24■■■■□ 3.23
HMG20B-207ENST00000461099 RTEL1-TNFRSF6BF6WH68 1400 aa35.23■■■■□ 3.23
HMG20B-207ENST00000461099 IQSEC2Q5JU85 1478 aa35.22■■■■□ 3.23
HMG20B-207ENST00000461099 MYO3AQ8NEV4 1616 aa35.21■■■■□ 3.23
HMG20B-207ENST00000461099 ZNF142P52746 1687 aaPredicted RBP35.21■■■■□ 3.23
HMG20B-207ENST00000461099 PKD2Q13563 968 aa35.19■■■■□ 3.22
HMG20B-207ENST00000461099 CEP170BQ9Y4F5 1589 aaPredicted RBP35.18■■■■□ 3.22
HMG20B-207ENST00000461099 DHX29Q7Z478 1369 aaKnown RBP35.18■■■■□ 3.22
HMG20B-207ENST00000461099 PLA2R1Q13018 1463 aa35.17■■■■□ 3.22
HMG20B-207ENST00000461099 DISP3Q9P2K9 1392 aa35.16■■■■□ 3.22
HMG20B-207ENST00000461099 ZNF335Q9H4Z2 1342 aaPredicted RBP35.13■■■■□ 3.21
HMG20B-207ENST00000461099 TCOF1Q13428 1488 aaKnown RBP35.12■■■■□ 3.21
HMG20B-207ENST00000461099 NCOA2Q15596 1464 aa35.09■■■■□ 3.21
HMG20B-207ENST00000461099 KIF3BO15066 747 aa35.09■■■■□ 3.21
HMG20B-207ENST00000461099 RSPH4AQ5TD94 716 aa35.09■■■■□ 3.21
HMG20B-207ENST00000461099 CCDC141Q6ZP82 1450 aa35.09■■■■□ 3.21
HMG20B-207ENST00000461099 A2ML1A8K2U0 1454 aa35.06■■■■□ 3.2
HMG20B-207ENST00000461099 CAMSAP2Q08AD1 1489 aa35.05■■■■□ 3.2
HMG20B-207ENST00000461099 ILDR2Q71H61 639 aa35.04■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms