RNA–Protein interactions for RNA: ENST00000461071.1

SLC39A1-208, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 529 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-208ENST00000461071 FER1L4A9Z1Z3 1794 aa28.84■■■□□ 2.21
SLC39A1-208ENST00000461071 UBTFP17480 764 aaKnown RBP28.84■■■□□ 2.21
SLC39A1-208ENST00000461071 FBXO41Q8TF61 875 aa28.84■■■□□ 2.21
SLC39A1-208ENST00000461071 CDK11AQ9UQ88 783 aaPredicted RBP28.81■■■□□ 2.2
SLC39A1-208ENST00000461071 LRRIQ1Q96JM4 1722 aa28.8■■■□□ 2.2
SLC39A1-208ENST00000461071 KIF14Q15058 1648 aa28.8■■■□□ 2.2
SLC39A1-208ENST00000461071 EFCAB2Q5VUJ9 269 aa28.78■■■□□ 2.2
SLC39A1-208ENST00000461071 ATP10AO60312 1499 aa28.78■■■□□ 2.2
SLC39A1-208ENST00000461071 TROQ12816 1431 aaPredicted RBP28.76■■■□□ 2.19
SLC39A1-208ENST00000461071 ARHGEF12Q9NZN5 1544 aa28.74■■■□□ 2.19
SLC39A1-208ENST00000461071 C9orf84Q5VXU9 1444 aa28.73■■■□□ 2.19
SLC39A1-208ENST00000461071 ZNF518AQ6AHZ1 1483 aa28.72■■■□□ 2.19
SLC39A1-208ENST00000461071 KDM5CP41229 1560 aa28.72■■■□□ 2.19
SLC39A1-208ENST00000461071 CHIC1Q5VXU3 224 aa28.72■■■□□ 2.19
SLC39A1-208ENST00000461071 ATP1B4Q9UN42 357 aaPredicted RBP28.72■■■□□ 2.19
SLC39A1-208ENST00000461071 CDC42BPBQ9Y5S2 1711 aa28.71■■■□□ 2.19
SLC39A1-208ENST00000461071 CLIP1P30622 1438 aa28.69■■■□□ 2.18
SLC39A1-208ENST00000461071 SETD1BQ9UPS6 1966 aaKnown RBP28.68■■■□□ 2.18
SLC39A1-208ENST00000461071 ARHGAP5Q13017 1502 aa28.68■■■□□ 2.18
SLC39A1-208ENST00000461071 EHMT2Q96KQ7 1210 aa28.67■■■□□ 2.18
SLC39A1-208ENST00000461071 PREX1Q8TCU6 1659 aa28.65■■■□□ 2.18
SLC39A1-208ENST00000461071 HSPA2P54652 639 aa28.64■■■□□ 2.18
SLC39A1-208ENST00000461071 MLECQ14165 292 aa28.64■■■□□ 2.18
SLC39A1-208ENST00000461071 REREQ9P2R6 1566 aa28.63■■■□□ 2.17
SLC39A1-208ENST00000461071 PREX2Q70Z35 1606 aa28.62■■■□□ 2.17
SLC39A1-208ENST00000461071 DIP2CQ9Y2E4 1556 aa28.61■■■□□ 2.17
SLC39A1-208ENST00000461071 CASKIN1Q8WXD9 1431 aa28.6■■■□□ 2.17
SLC39A1-208ENST00000461071 AFAP1Q8N556 730 aa28.6■■■□□ 2.17
SLC39A1-208ENST00000461071 CCDC18Q5T9S5 1454 aa28.59■■■□□ 2.17
SLC39A1-208ENST00000461071 MLH3Q9UHC1 1453 aa28.59■■■□□ 2.17
SLC39A1-208ENST00000461071 PLPPR3Q6T4P5 718 aa28.57■■■□□ 2.16
SLC39A1-208ENST00000461071 CDC42BPAQ5VT25 1732 aa28.56■■■□□ 2.16
SLC39A1-208ENST00000461071 ABCA6Q8N139 1617 aa28.56■■■□□ 2.16
SLC39A1-208ENST00000461071 ITSN2Q9NZM3 1697 aa28.55■■■□□ 2.16
SLC39A1-208ENST00000461071 ABCC1P33527 1531 aa28.55■■■□□ 2.16
SLC39A1-208ENST00000461071 AGLP35573 1532 aa28.52■■■□□ 2.16
SLC39A1-208ENST00000461071 STRCQ7RTU9 1775 aa28.5■■■□□ 2.15
SLC39A1-208ENST00000461071 KIDINS220Q9ULH0 1771 aa28.49■■■□□ 2.15
SLC39A1-208ENST00000461071 FYCO1Q9BQS8 1478 aa28.48■■■□□ 2.15
SLC39A1-208ENST00000461071 TRAPPC8Q9Y2L5 1435 aa28.48■■■□□ 2.15
SLC39A1-208ENST00000461071 C3P01024 1663 aa28.48■■■□□ 2.15
SLC39A1-208ENST00000461071 CEBPAP49715 358 aaPredicted RBP28.47■■■□□ 2.15
SLC39A1-208ENST00000461071 CERKQ8TCT0 537 aa28.44■■■□□ 2.14
SLC39A1-208ENST00000461071 MYT1LQ9UL68 1186 aa28.41■■■□□ 2.14
SLC39A1-208ENST00000461071 UHRF1BP1Q6BDS2 1440 aa28.41■■■□□ 2.14
SLC39A1-208ENST00000461071 SAMD9LQ8IVG5 1584 aa28.38■■■□□ 2.13
SLC39A1-208ENST00000461071 DMRT2Q9Y5R5 561 aa28.38■■■□□ 2.13
SLC39A1-208ENST00000461071 CNTLNQ9NXG0 1405 aa28.35■■■□□ 2.13
SLC39A1-208ENST00000461071 GPATCH8Q9UKJ3 1502 aaKnown RBP28.34■■■□□ 2.13
SLC39A1-208ENST00000461071 MROH2AA6NES4 1674 aa28.34■■■□□ 2.13
SLC39A1-208ENST00000461071 SYCP2Q9BX26 1530 aa28.31■■■□□ 2.12
SLC39A1-208ENST00000461071 ESF1Q9H501 851 aaKnown RBP28.29■■■□□ 2.12
SLC39A1-208ENST00000461071 PTPRTO14522 1441 aa28.28■■■□□ 2.12
SLC39A1-208ENST00000461071 KIAA1107Q9UPP5 1409 aa28.28■■■□□ 2.12
SLC39A1-208ENST00000461071 PLEKHH2Q8IVE3 1493 aa28.27■■■□□ 2.12
SLC39A1-208ENST00000461071 INO80Q9ULG1 1556 aaPredicted RBP28.26■■■□□ 2.11
SLC39A1-208ENST00000461071 SUPT6HQ7KZ85 1726 aaKnown RBP28.26■■■□□ 2.11
SLC39A1-208ENST00000461071 ATP7AQ04656 1500 aa28.24■■■□□ 2.11
SLC39A1-208ENST00000461071 NPATQ14207 1427 aa28.24■■■□□ 2.11
SLC39A1-208ENST00000461071 PLXNC1O60486 1568 aa28.24■■■□□ 2.11
SLC39A1-208ENST00000461071 SPAG9O60271 1321 aaKnown RBP28.23■■■□□ 2.11
SLC39A1-208ENST00000461071 ZNF777Q9ULD5 760 aaPredicted RBP28.23■■■□□ 2.11
SLC39A1-208ENST00000461071 HNRNPMP52272 730 aaKnown RBP eCLIP28.2■■■□□ 2.1
SLC39A1-208ENST00000461071 CCNB3Q8WWL7 1395 aa28.19■■■□□ 2.1
SLC39A1-208ENST00000461071 NCOA1Q15788 1441 aa28.18■■■□□ 2.1
SLC39A1-208ENST00000461071 CFDP1Q9UEE9 299 aaPredicted RBP28.18■■■□□ 2.1
SLC39A1-208ENST00000461071 ADGBQ8N7X0 1667 aa28.17■■■□□ 2.1
SLC39A1-208ENST00000461071 CLTCQ00610 1675 aaKnown RBP28.16■■■□□ 2.1
SLC39A1-208ENST00000461071 ZMYM3Q14202 1370 aa28.16■■■□□ 2.1
SLC39A1-208ENST00000461071 A2MP01023 1474 aa28.15■■■□□ 2.1
SLC39A1-208ENST00000461071 LTBP4Q8N2S1 1624 aa28.14■■■□□ 2.1
SLC39A1-208ENST00000461071 MTUS2Q5JR59 1369 aa28.14■■■□□ 2.1
SLC39A1-208ENST00000461071 ZNF142P52746 1687 aaPredicted RBP28.13■■■□□ 2.09
SLC39A1-208ENST00000461071 TIAM1Q13009 1591 aa28.12■■■□□ 2.09
SLC39A1-208ENST00000461071 CAMSAP1Q5T5Y3 1602 aa28.11■■■□□ 2.09
SLC39A1-208ENST00000461071 IQSEC2Q5JU85 1478 aa28.1■■■□□ 2.09
SLC39A1-208ENST00000461071 EHBP1L1Q8N3D4 1523 aa28.09■■■□□ 2.09
SLC39A1-208ENST00000461071 MYO3AQ8NEV4 1616 aa28.08■■■□□ 2.09
SLC39A1-208ENST00000461071 PPP6R1Q9UPN7 881 aa28.08■■■□□ 2.09
SLC39A1-208ENST00000461071 MBD5Q9P267 1494 aa28.08■■■□□ 2.09
SLC39A1-208ENST00000461071 PTPRKQ15262 1439 aa28.06■■■□□ 2.08
SLC39A1-208ENST00000461071 CEP162Q5TB80 1403 aa28.05■■■□□ 2.08
SLC39A1-208ENST00000461071 RTEL1-TNFRSF6BF6WH68 1400 aa28.04■■■□□ 2.08
SLC39A1-208ENST00000461071 PLA2R1Q13018 1463 aa28.03■■■□□ 2.08
SLC39A1-208ENST00000461071 ZNF644Q9H582 1327 aaPredicted RBP28.02■■■□□ 2.08
SLC39A1-208ENST00000461071 CEP170BQ9Y4F5 1589 aaPredicted RBP28.02■■■□□ 2.08
SLC39A1-208ENST00000461071 GGT6Q6P531 493 aa27.98■■■□□ 2.07
SLC39A1-208ENST00000461071 TCOF1Q13428 1488 aaKnown RBP27.97■■■□□ 2.07
SLC39A1-208ENST00000461071 PKD2Q13563 968 aa27.96■■■□□ 2.07
SLC39A1-208ENST00000461071 DHX29Q7Z478 1369 aaKnown RBP27.95■■■□□ 2.06
SLC39A1-208ENST00000461071 FAM135AQ9P2D6 1515 aa27.94■■■□□ 2.06
SLC39A1-208ENST00000461071 NCKAP5LQ9HCH0 1330 aa27.93■■■□□ 2.06
SLC39A1-208ENST00000461071 A2ML1A8K2U0 1454 aa27.9■■■□□ 2.06
SLC39A1-208ENST00000461071 NCOA2Q15596 1464 aa27.9■■■□□ 2.06
SLC39A1-208ENST00000461071 CCDC141Q6ZP82 1450 aa27.9■■■□□ 2.06
SLC39A1-208ENST00000461071 DNMT1P26358 1616 aaKnown RBP27.9■■■□□ 2.06
SLC39A1-208ENST00000461071 RSPH4AQ5TD94 716 aa27.89■■■□□ 2.06
SLC39A1-208ENST00000461071 CAMSAP2Q08AD1 1489 aa27.89■■■□□ 2.05
SLC39A1-208ENST00000461071 DISP3Q9P2K9 1392 aa27.87■■■□□ 2.05
SLC39A1-208ENST00000461071 ARHGEF5Q12774 1597 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms