RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 MAP3K1Q13233 1512 aa31.66■■■□□ 2.66
SNAPC3-204ENST00000461041 DENND4BO75064 1496 aaPredicted RBP31.65■■■□□ 2.66
SNAPC3-204ENST00000461041 ADGRL1O94910 1474 aa31.65■■■□□ 2.66
SNAPC3-204ENST00000461041 FRMPD1Q5SYB0 1578 aa31.64■■■□□ 2.66
SNAPC3-204ENST00000461041 GPATCH8Q9UKJ3 1502 aaKnown RBP31.62■■■□□ 2.65
SNAPC3-204ENST00000461041 LRRC9Q6ZRR7 1453 aa31.61■■■□□ 2.65
SNAPC3-204ENST00000461041 SCAPERQ9BY12 1400 aa31.61■■■□□ 2.65
SNAPC3-204ENST00000461041 RICTORQ6R327 1708 aa31.61■■■□□ 2.65
SNAPC3-204ENST00000461041 CCNB3Q8WWL7 1395 aa31.59■■■□□ 2.65
SNAPC3-204ENST00000461041 SUPT6HQ7KZ85 1726 aaKnown RBP31.58■■■□□ 2.65
SNAPC3-204ENST00000461041 NCOA2Q15596 1464 aa31.55■■■□□ 2.64
SNAPC3-204ENST00000461041 APLP2Q06481 763 aa31.55■■■□□ 2.64
SNAPC3-204ENST00000461041 KANK4Q5T7N3 995 aaPredicted RBP31.55■■■□□ 2.64
SNAPC3-204ENST00000461041 POGZQ7Z3K3 1410 aa31.54■■■□□ 2.64
SNAPC3-204ENST00000461041 ABCC1P33527 1531 aa31.5■■■□□ 2.63
SNAPC3-204ENST00000461041 CFDP1Q9UEE9 299 aaPredicted RBP31.5■■■□□ 2.63
SNAPC3-204ENST00000461041 ITSN2Q9NZM3 1697 aa31.5■■■□□ 2.63
SNAPC3-204ENST00000461041 ZMYM4Q5VZL5 1548 aa31.49■■■□□ 2.63
SNAPC3-204ENST00000461041 ZNF777Q9ULD5 760 aaPredicted RBP31.49■■■□□ 2.63
SNAPC3-204ENST00000461041 SAMD9LQ8IVG5 1584 aa31.48■■■□□ 2.63
SNAPC3-204ENST00000461041 ARHGEF12Q9NZN5 1544 aa31.46■■■□□ 2.63
SNAPC3-204ENST00000461041 ZNF518AQ6AHZ1 1483 aa31.46■■■□□ 2.63
SNAPC3-204ENST00000461041 ARHGEF40Q8TER5 1519 aa31.42■■■□□ 2.62
SNAPC3-204ENST00000461041 MAGI2Q86UL8 1455 aa31.41■■■□□ 2.62
SNAPC3-204ENST00000461041 AFAP1Q8N556 730 aa31.41■■■□□ 2.62
SNAPC3-204ENST00000461041 TRAPPC8Q9Y2L5 1435 aa31.41■■■□□ 2.62
SNAPC3-204ENST00000461041 KDM5CP41229 1560 aa31.4■■■□□ 2.62
SNAPC3-204ENST00000461041 ZFYVE16Q7Z3T8 1539 aa31.39■■■□□ 2.62
SNAPC3-204ENST00000461041 SYCP2Q9BX26 1530 aa31.39■■■□□ 2.62
SNAPC3-204ENST00000461041 PLEKHH2Q8IVE3 1493 aa31.39■■■□□ 2.62
SNAPC3-204ENST00000461041 YEATS2Q9ULM3 1422 aa31.38■■■□□ 2.61
SNAPC3-204ENST00000461041 KIAA1107Q9UPP5 1409 aa31.37■■■□□ 2.61
SNAPC3-204ENST00000461041 ZNF644Q9H582 1327 aaPredicted RBP31.35■■■□□ 2.61
SNAPC3-204ENST00000461041 HNRNPMP52272 730 aaKnown RBP eCLIP31.35■■■□□ 2.61
SNAPC3-204ENST00000461041 HECW2Q9P2P5 1572 aa31.32■■■□□ 2.6
SNAPC3-204ENST00000461041 KDM4FA0A1W2PPD8 638 aa31.32■■■□□ 2.6
SNAPC3-204ENST00000461041 MLH3Q9UHC1 1453 aa31.29■■■□□ 2.6
SNAPC3-204ENST00000461041 MYOM3Q5VTT5 1437 aa31.29■■■□□ 2.6
SNAPC3-204ENST00000461041 CAMSAP2Q08AD1 1489 aa31.28■■■□□ 2.6
SNAPC3-204ENST00000461041 MYT1LQ9UL68 1186 aa31.27■■■□□ 2.6
SNAPC3-204ENST00000461041 MBD5Q9P267 1494 aa31.26■■■□□ 2.59
SNAPC3-204ENST00000461041 ATP10AO60312 1499 aa31.25■■■□□ 2.59
SNAPC3-204ENST00000461041 MIA2Q96PC5 1412 aa31.24■■■□□ 2.59
SNAPC3-204ENST00000461041 KIDINS220Q9ULH0 1771 aa31.22■■■□□ 2.59
SNAPC3-204ENST00000461041 DIP2CQ9Y2E4 1556 aa31.22■■■□□ 2.59
SNAPC3-204ENST00000461041 ARID4BQ4LE39 1312 aaPredicted RBP31.22■■■□□ 2.59
SNAPC3-204ENST00000461041 ABCA6Q8N139 1617 aa31.21■■■□□ 2.59
SNAPC3-204ENST00000461041 AEBP2Q6ZN18 517 aaPredicted RBP31.21■■■□□ 2.59
SNAPC3-204ENST00000461041 C9orf84Q5VXU9 1444 aa31.21■■■□□ 2.59
SNAPC3-204ENST00000461041 SPAG9O60271 1321 aaKnown RBP31.21■■■□□ 2.59
SNAPC3-204ENST00000461041 SIGLEC1Q9BZZ2 1709 aa31.2■■■□□ 2.58
SNAPC3-204ENST00000461041 INO80Q9ULG1 1556 aaPredicted RBP31.17■■■□□ 2.58
SNAPC3-204ENST00000461041 ATP7AQ04656 1500 aa31.16■■■□□ 2.58
SNAPC3-204ENST00000461041 BCORL1Q5H9F3 1711 aa31.15■■■□□ 2.58
SNAPC3-204ENST00000461041 CCDC141Q6ZP82 1450 aa31.15■■■□□ 2.58
SNAPC3-204ENST00000461041 ARHGEF5Q12774 1597 aa31.14■■■□□ 2.58
SNAPC3-204ENST00000461041 RSPH4AQ5TD94 716 aa31.13■■■□□ 2.57
SNAPC3-204ENST00000461041 REREQ9P2R6 1566 aa31.13■■■□□ 2.57
SNAPC3-204ENST00000461041 FGD6Q6ZV73 1430 aa31.12■■■□□ 2.57
SNAPC3-204ENST00000461041 ADAMTSL3P82987 1691 aa31.11■■■□□ 2.57
SNAPC3-204ENST00000461041 PTPN23Q9H3S7 1636 aa31.11■■■□□ 2.57
SNAPC3-204ENST00000461041 RTEL1-TNFRSF6BF6WH68 1400 aa31.07■■■□□ 2.57
SNAPC3-204ENST00000461041 PPARGC1BQ86YN6 1023 aaKnown RBP31.06■■■□□ 2.56
SNAPC3-204ENST00000461041 TCOF1Q13428 1488 aaKnown RBP31.05■■■□□ 2.56
SNAPC3-204ENST00000461041 MLECQ14165 292 aa31.03■■■□□ 2.56
SNAPC3-204ENST00000461041 AGLP35573 1532 aa31.03■■■□□ 2.56
SNAPC3-204ENST00000461041 MADDQ8WXG6 1647 aa31.02■■■□□ 2.56
SNAPC3-204ENST00000461041 TSPY4P0CV99 314 aa31.02■■■□□ 2.56
SNAPC3-204ENST00000461041 TSPY10P0CW01 314 aa31.02■■■□□ 2.56
SNAPC3-204ENST00000461041 A2MP01023 1474 aa31■■■□□ 2.55
SNAPC3-204ENST00000461041 ADGBQ8N7X0 1667 aa31■■■□□ 2.55
SNAPC3-204ENST00000461041 MAST1Q9Y2H9 1570 aa30.98■■■□□ 2.55
SNAPC3-204ENST00000461041 PLXNC1O60486 1568 aa30.97■■■□□ 2.55
SNAPC3-204ENST00000461041 ABCC5O15440 1437 aa30.94■■■□□ 2.54
SNAPC3-204ENST00000461041 DNMT1P26358 1616 aaKnown RBP30.94■■■□□ 2.54
SNAPC3-204ENST00000461041 RIMS1Q86UR5 1692 aaKnown RBP30.93■■■□□ 2.54
SNAPC3-204ENST00000461041 PTPRMP28827 1452 aa30.93■■■□□ 2.54
SNAPC3-204ENST00000461041 CROCC2H7BZ55 1655 aa30.92■■■□□ 2.54
SNAPC3-204ENST00000461041 FER1L4A9Z1Z3 1794 aa30.92■■■□□ 2.54
SNAPC3-204ENST00000461041 DAPK1P53355 1430 aa30.91■■■□□ 2.54
SNAPC3-204ENST00000461041 FAM50AQ14320 339 aaKnown RBP30.9■■■□□ 2.54
SNAPC3-204ENST00000461041 DHX29Q7Z478 1369 aaKnown RBP30.9■■■□□ 2.54
SNAPC3-204ENST00000461041 SHANK2Q9UPX8 1470 aa30.89■■■□□ 2.54
SNAPC3-204ENST00000461041 GGT6Q6P531 493 aa30.77■■■□□ 2.52
SNAPC3-204ENST00000461041 ESF1Q9H501 851 aaKnown RBP30.77■■■□□ 2.52
SNAPC3-204ENST00000461041 CHIC2Q9UKJ5 165 aa30.77■■■□□ 2.52
SNAPC3-204ENST00000461041 KIF3BO15066 747 aa30.76■■■□□ 2.51
SNAPC3-204ENST00000461041 DUOX2Q9NRD8 1548 aa30.75■■■□□ 2.51
SNAPC3-204ENST00000461041 KIF15Q9NS87 1388 aa30.75■■■□□ 2.51
SNAPC3-204ENST00000461041 PLPPR3Q6T4P5 718 aa30.74■■■□□ 2.51
SNAPC3-204ENST00000461041 RRP7BPQ9NSQ0 103 aa30.74■■■□□ 2.51
SNAPC3-204ENST00000461041 ANKRD30AQ9BXX3 1397 aa30.73■■■□□ 2.51
SNAPC3-204ENST00000461041 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.73■■■□□ 2.51
SNAPC3-204ENST00000461041 CNTLNQ9NXG0 1405 aa30.73■■■□□ 2.51
SNAPC3-204ENST00000461041 ADGRL2O95490 1459 aa30.71■■■□□ 2.51
SNAPC3-204ENST00000461041 RRBP1Q9P2E9 1410 aaKnown RBP30.71■■■□□ 2.51
SNAPC3-204ENST00000461041 EIF2AK4Q9P2K8 1649 aaKnown RBP30.7■■■□□ 2.51
SNAPC3-204ENST00000461041 NCOA1Q15788 1441 aa30.7■■■□□ 2.5
SNAPC3-204ENST00000461041 CEBPAP49715 358 aaPredicted RBP30.69■■■□□ 2.5
SNAPC3-204ENST00000461041 PPP6R1Q9UPN7 881 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms