RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 CABP2Q9NPB3 220 aa9.3□□□□□ -0.92
CNN3-204ENST00000461018 ZNF710Q8N1W2 664 aa9.29□□□□□ -0.92
CNN3-204ENST00000461018 HOXB3P14651 431 aaPredicted RBP9.27□□□□□ -0.93
CNN3-204ENST00000461018 HOXB1P14653 301 aaPredicted RBP9.27□□□□□ -0.93
CNN3-204ENST00000461018 DOK7Q18PE1 504 aa9.26□□□□□ -0.93
CNN3-204ENST00000461018 ZCCHC6Q5VYS8 1495 aaKnown RBP9.26□□□□□ -0.93
CNN3-204ENST00000461018 NCAPD3P42695 1498 aa9.25□□□□□ -0.93
CNN3-204ENST00000461018 DCAF1Q9Y4B6 1507 aa9.25□□□□□ -0.93
CNN3-204ENST00000461018 SMARCA2P51531 1590 aa9.24□□□□□ -0.93
CNN3-204ENST00000461018 ERBB3P21860 1342 aa9.24□□□□□ -0.93
CNN3-204ENST00000461018 RIMBP2O15034 1052 aa9.22□□□□□ -0.93
CNN3-204ENST00000461018 ECM2O94769 699 aaPredicted RBP9.22□□□□□ -0.93
CNN3-204ENST00000461018 KIF21AQ7Z4S6 1674 aa9.18□□□□□ -0.94
CNN3-204ENST00000461018 RNF166Q96A37 237 aaPredicted RBP9.18□□□□□ -0.94
CNN3-204ENST00000461018 RIMBP3CA6NJZ7 1639 aa9.17□□□□□ -0.94
CNN3-204ENST00000461018 RIMBP3BA6NNM3 1639 aa9.17□□□□□ -0.94
CNN3-204ENST00000461018 RIMBP3Q9UFD9 1639 aa9.17□□□□□ -0.94
CNN3-204ENST00000461018 BAZ1AQ9NRL2 1556 aaPredicted RBP9.17□□□□□ -0.94
CNN3-204ENST00000461018 PKD2Q13563 968 aa9.17□□□□□ -0.94
CNN3-204ENST00000461018 ATAD2BQ9ULI0 1458 aa9.16□□□□□ -0.94
CNN3-204ENST00000461018 RIOK3O14730 519 aaKnown RBP9.16□□□□□ -0.94
CNN3-204ENST00000461018 VARS2Q5ST30 1063 aaKnown RBP9.15□□□□□ -0.94
CNN3-204ENST00000461018 RNF25Q96BH1 459 aaPredicted RBP9.15□□□□□ -0.94
CNN3-204ENST00000461018 ZSWIM6Q9HCJ5 1215 aa9.15□□□□□ -0.94
CNN3-204ENST00000461018 EFCAB3Q8N7B9 438 aa9.14□□□□□ -0.95
CNN3-204ENST00000461018 MYT1LQ9UL68 1186 aa9.13□□□□□ -0.95
CNN3-204ENST00000461018 CYB5RLQ6IPT4 315 aa9.12□□□□□ -0.95
CNN3-204ENST00000461018 ZNF687Q8N1G0 1237 aa9.11□□□□□ -0.95
CNN3-204ENST00000461018 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.1□□□□□ -0.95
CNN3-204ENST00000461018 RGL2O15211 777 aa9.1□□□□□ -0.95
CNN3-204ENST00000461018 VGFO15240 615 aaPredicted RBP9.1□□□□□ -0.95
CNN3-204ENST00000461018 MICALL2Q8IY33 904 aa9.1□□□□□ -0.95
CNN3-204ENST00000461018 ZFP91Q96JP5 570 aaPredicted RBP9.1□□□□□ -0.95
CNN3-204ENST00000461018 PTGER2P43116 358 aa9.08□□□□□ -0.96
CNN3-204ENST00000461018 SOX12O15370 315 aa9.07□□□□□ -0.96
CNN3-204ENST00000461018 GPR153Q6NV75 609 aa9.07□□□□□ -0.96
CNN3-204ENST00000461018 TMEM92Q6UXU6 159 aa9.07□□□□□ -0.96
CNN3-204ENST00000461018 TAOK2Q9UL54 1235 aa9.07□□□□□ -0.96
CNN3-204ENST00000461018 LAMC3Q9Y6N6 1575 aa9.07□□□□□ -0.96
CNN3-204ENST00000461018 ARHGEF11O15085 1522 aa9.06□□□□□ -0.96
CNN3-204ENST00000461018 PDS5BQ9NTI5 1447 aa9.05□□□□□ -0.96
CNN3-204ENST00000461018 HMGXB3Q12766 1538 aa9.05□□□□□ -0.96
CNN3-204ENST00000461018 STK24Q9Y6E0 443 aa9.05□□□□□ -0.96
CNN3-204ENST00000461018 MRC2Q9UBG0 1479 aa9.04□□□□□ -0.96
CNN3-204ENST00000461018 STK25O00506 426 aa9.03□□□□□ -0.96
CNN3-204ENST00000461018 BCL11BQ9C0K0 894 aaPredicted RBP9.03□□□□□ -0.96
CNN3-204ENST00000461018 WDR62O43379 1518 aa9.03□□□□□ -0.96
CNN3-204ENST00000461018 ARSIQ5FYB1 569 aa9□□□□□ -0.97
CNN3-204ENST00000461018 ANKRD13DQ6ZTN6 518 aa9□□□□□ -0.97
CNN3-204ENST00000461018 BAZ1BQ9UIG0 1483 aaKnown RBP9□□□□□ -0.97
CNN3-204ENST00000461018 MS4A4AQ96JQ5 239 aa8.99□□□□□ -0.97
CNN3-204ENST00000461018 ZNF316A6NFI3 1004 aaPredicted RBP8.98□□□□□ -0.97
CNN3-204ENST00000461018 PHF8Q9UPP1 1060 aa8.98□□□□□ -0.97
CNN3-204ENST00000461018 ARAP1Q96P48 1450 aa8.97□□□□□ -0.97
CNN3-204ENST00000461018 SMARCA4P51532 1647 aa8.97□□□□□ -0.97
CNN3-204ENST00000461018 LSM11P83369 360 aaKnown RBP eCLIP8.95□□□□□ -0.98
CNN3-204ENST00000461018 CADPSQ9ULU8 1353 aa8.95□□□□□ -0.98
CNN3-204ENST00000461018 CHGAP10645 457 aaKnown RBP8.94□□□□□ -0.98
CNN3-204ENST00000461018 NLRP6P59044 892 aa8.93□□□□□ -0.98
CNN3-204ENST00000461018 KHSRPQ92945 711 aaKnown RBP eCLIP8.92□□□□□ -0.98
CNN3-204ENST00000461018 PBX2P40425 430 aa8.91□□□□□ -0.98
CNN3-204ENST00000461018 ZNF608Q9ULD9 1512 aaPredicted RBP8.89□□□□□ -0.99
CNN3-204ENST00000461018 MFRPQ9BY79 579 aa8.87□□□□□ -0.99
CNN3-204ENST00000461018 CEP164Q9UPV0 1460 aa8.87□□□□□ -0.99
CNN3-204ENST00000461018 URB2Q14146 1524 aaKnown RBP8.86□□□□□ -0.99
CNN3-204ENST00000461018 HS6ST3Q8IZP7 471 aa8.86□□□□□ -0.99
CNN3-204ENST00000461018 FBXO22Q8NEZ5 403 aa8.86□□□□□ -0.99
CNN3-204ENST00000461018 RTN4Q9NQC3 1192 aaKnown RBP8.86□□□□□ -0.99
CNN3-204ENST00000461018 FANCD2Q9BXW9 1451 aa8.85□□□□□ -0.99
CNN3-204ENST00000461018 NUDT7P0C024 238 aa8.85□□□□□ -0.99
CNN3-204ENST00000461018 AMER1Q5JTC6 1135 aaPredicted RBP8.85□□□□□ -0.99
CNN3-204ENST00000461018 PLA2G2EQ9NZK7 142 aa8.84□□□□□ -0.99
CNN3-204ENST00000461018 HCSTQ9UBK5 93 aa8.84□□□□□ -0.99
CNN3-204ENST00000461018 PEG3Q9GZU2 1588 aa8.83□□□□□ -1
CNN3-204ENST00000461018 C2orf72A6NCS6 295 aa8.83□□□□□ -1
CNN3-204ENST00000461018 KIF3CO14782 793 aa8.83□□□□□ -1
CNN3-204ENST00000461018 LHX6Q9UPM6 363 aa8.83□□□□□ -1
CNN3-204ENST00000461018 SLC34A2O95436 690 aa8.81□□□□□ -1
CNN3-204ENST00000461018 AXIN2Q9Y2T1 843 aa8.81□□□□□ -1
CNN3-204ENST00000461018 PCDHGA4Q9Y5G9 962 aa8.81□□□□□ -1
CNN3-204ENST00000461018 MROH2BQ7Z745 1585 aa8.81□□□□□ -1
CNN3-204ENST00000461018 KDM4FA0A1W2PPD8 638 aa8.79□□□□□ -1
CNN3-204ENST00000461018 POTEEQ6S8J3 1075 aa8.79□□□□□ -1
CNN3-204ENST00000461018 CHD1O14646 1710 aa8.78□□□□□ -1
CNN3-204ENST00000461018 PSDA5PKW4 1024 aaPredicted RBP8.78□□□□□ -1
CNN3-204ENST00000461018 TMC2Q8TDI7 906 aa8.77□□□□□ -1.01
CNN3-204ENST00000461018 ARHGAP33O14559 1287 aa8.76□□□□□ -1.01
CNN3-204ENST00000461018 PPP1R37O75864 691 aa8.76□□□□□ -1.01
CNN3-204ENST00000461018 NKX1-1Q15270 411 aaPredicted RBP8.76□□□□□ -1.01
CNN3-204ENST00000461018 ADGRD1Q6QNK2 874 aa8.76□□□□□ -1.01
CNN3-204ENST00000461018 RSF1Q96T23 1441 aaPredicted RBP8.75□□□□□ -1.01
CNN3-204ENST00000461018 AQRO60306 1485 aaKnown RBP eCLIP8.73□□□□□ -1.01
CNN3-204ENST00000461018 TK2O00142 265 aa8.72□□□□□ -1.01
CNN3-204ENST00000461018 CFTRP13569 1480 aa8.71□□□□□ -1.01
CNN3-204ENST00000461018 IFT140Q96RY7 1462 aa8.71□□□□□ -1.01
CNN3-204ENST00000461018 EIF4G3O43432 1585 aaKnown RBP8.7□□□□□ -1.02
CNN3-204ENST00000461018 RYDENQ9NUL5 291 aaKnown RBP8.69□□□□□ -1.02
CNN3-204ENST00000461018 STAC3Q96MF2 364 aa8.68□□□□□ -1.02
CNN3-204ENST00000461018 HRO43593 1189 aa8.67□□□□□ -1.02
CNN3-204ENST00000461018 WIZO95785 1651 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms