RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 ROCK1Q13464 1354 aa16.69■□□□□ 0.26
GCOM1-203ENST00000460962 RPRD2Q5VT52 1461 aaKnown RBP16.68■□□□□ 0.26
GCOM1-203ENST00000460962 ANKRD30BQ9BXX2 1392 aa16.68■□□□□ 0.26
GCOM1-203ENST00000460962 C11orf95C9JLR9 678 aaPredicted RBP16.68■□□□□ 0.26
GCOM1-203ENST00000460962 PRKRIP1Q9H875 184 aaPredicted RBP16.68■□□□□ 0.26
GCOM1-203ENST00000460962 CCDC184Q52MB2 194 aa16.67■□□□□ 0.26
GCOM1-203ENST00000460962 CDK11AQ9UQ88 783 aaPredicted RBP16.66■□□□□ 0.26
GCOM1-203ENST00000460962 NBPF8Q3BBV2 869 aa16.65■□□□□ 0.26
GCOM1-203ENST00000460962 FAM9BQ8IZU0 186 aa16.65■□□□□ 0.26
GCOM1-203ENST00000460962 SLC4A1APQ9BWU0 796 aaKnown RBP16.65■□□□□ 0.26
GCOM1-203ENST00000460962 MRS2Q9HD23 443 aa16.65■□□□□ 0.26
GCOM1-203ENST00000460962 ABCC5O15440 1437 aa16.65■□□□□ 0.26
GCOM1-203ENST00000460962 DNMT1P26358 1616 aaKnown RBP16.65■□□□□ 0.26
GCOM1-203ENST00000460962 ERICH6BQ5W0A0 696 aa16.64■□□□□ 0.25
GCOM1-203ENST00000460962 TEX14Q8IWB6 1497 aa16.64■□□□□ 0.25
GCOM1-203ENST00000460962 ZNF644Q9H582 1327 aaPredicted RBP16.63■□□□□ 0.25
GCOM1-203ENST00000460962 KIF7Q2M1P5 1343 aa16.6■□□□□ 0.25
GCOM1-203ENST00000460962 PPP4R2Q9NY27 417 aa16.6■□□□□ 0.25
GCOM1-203ENST00000460962 MRC2Q9UBG0 1479 aa16.6■□□□□ 0.25
GCOM1-203ENST00000460962 ZBED9Q6R2W3 1325 aa16.6■□□□□ 0.25
GCOM1-203ENST00000460962 KIAA0556O60303 1618 aa16.6■□□□□ 0.25
GCOM1-203ENST00000460962 NUP153P49790 1475 aaKnown RBP16.59■□□□□ 0.25
GCOM1-203ENST00000460962 SPATA31E1Q6ZUB1 1445 aa16.59■□□□□ 0.25
GCOM1-203ENST00000460962 KIAA0586Q9BVV6 1533 aa16.59■□□□□ 0.25
GCOM1-203ENST00000460962 DISP1Q96F81 1524 aa16.58■□□□□ 0.24
GCOM1-203ENST00000460962 RAPGEF6Q8TEU7 1601 aa16.57■□□□□ 0.24
GCOM1-203ENST00000460962 FANCIQ9NVI1 1328 aa16.56■□□□□ 0.24
GCOM1-203ENST00000460962 POLR1AO95602 1720 aaPredicted RBP16.56■□□□□ 0.24
GCOM1-203ENST00000460962 ZNF608Q9ULD9 1512 aaPredicted RBP16.55■□□□□ 0.24
GCOM1-203ENST00000460962 MSH5O43196 834 aa16.54■□□□□ 0.24
GCOM1-203ENST00000460962 IFT140Q96RY7 1462 aa16.54■□□□□ 0.24
GCOM1-203ENST00000460962 CFDP1Q9UEE9 299 aaPredicted RBP16.54■□□□□ 0.24
GCOM1-203ENST00000460962 PZPP20742 1482 aa16.53■□□□□ 0.24
GCOM1-203ENST00000460962 CAMSAP2Q08AD1 1489 aa16.52■□□□□ 0.24
GCOM1-203ENST00000460962 TROQ12816 1431 aaPredicted RBP16.52■□□□□ 0.23
GCOM1-203ENST00000460962 PRG4Q92954 1404 aaPredicted RBP16.51■□□□□ 0.23
GCOM1-203ENST00000460962 ZNF326Q5BKZ1 582 aaKnown RBP16.5■□□□□ 0.23
GCOM1-203ENST00000460962 ZNF777Q9ULD5 760 aaPredicted RBP16.5■□□□□ 0.23
GCOM1-203ENST00000460962 KIAA1107Q9UPP5 1409 aa16.5■□□□□ 0.23
GCOM1-203ENST00000460962 GRIN2AQ12879 1464 aa16.5■□□□□ 0.23
GCOM1-203ENST00000460962 POLR3GLQ9BT43 218 aa16.49■□□□□ 0.23
GCOM1-203ENST00000460962 ITSN2Q9NZM3 1697 aa16.49■□□□□ 0.23
GCOM1-203ENST00000460962 B4GALNT3Q6L9W6 998 aa16.49■□□□□ 0.23
GCOM1-203ENST00000460962 ERICH6Q7L0X2 663 aa16.49■□□□□ 0.23
GCOM1-203ENST00000460962 ADGBQ8N7X0 1667 aa16.49■□□□□ 0.23
GCOM1-203ENST00000460962 USP47Q96K76 1375 aa16.48■□□□□ 0.23
GCOM1-203ENST00000460962 MBD5Q9P267 1494 aa16.48■□□□□ 0.23
GCOM1-203ENST00000460962 CNGB1Q14028 1251 aaPredicted RBP16.48■□□□□ 0.23
GCOM1-203ENST00000460962 PKD2Q13563 968 aa16.47■□□□□ 0.23
GCOM1-203ENST00000460962 GPATCH8Q9UKJ3 1502 aaKnown RBP16.46■□□□□ 0.23
GCOM1-203ENST00000460962 DHX29Q7Z478 1369 aaKnown RBP16.46■□□□□ 0.23
GCOM1-203ENST00000460962 ANKRD30AQ9BXX3 1397 aa16.46■□□□□ 0.22
GCOM1-203ENST00000460962 ADGRL2O95490 1459 aa16.45■□□□□ 0.22
GCOM1-203ENST00000460962 PLB1Q6P1J6 1458 aa16.44■□□□□ 0.22
GCOM1-203ENST00000460962 KIF14Q15058 1648 aa16.44■□□□□ 0.22
GCOM1-203ENST00000460962 SMG6Q86US8 1419 aaKnown RBP16.43■□□□□ 0.22
GCOM1-203ENST00000460962 ARID4BQ4LE39 1312 aaPredicted RBP16.43■□□□□ 0.22
GCOM1-203ENST00000460962 BCORL1Q5H9F3 1711 aa16.43■□□□□ 0.22
GCOM1-203ENST00000460962 CROCC2H7BZ55 1655 aa16.42■□□□□ 0.22
GCOM1-203ENST00000460962 EIF4G3O43432 1585 aaKnown RBP16.42■□□□□ 0.22
GCOM1-203ENST00000460962 ANKRD50Q9ULJ7 1429 aa16.42■□□□□ 0.22
GCOM1-203ENST00000460962 ADCY10Q96PN6 1610 aa16.41■□□□□ 0.22
GCOM1-203ENST00000460962 CHMP7Q8WUX9 453 aaPredicted RBP16.4■□□□□ 0.22
GCOM1-203ENST00000460962 NUDCQ9Y266 331 aa16.4■□□□□ 0.22
GCOM1-203ENST00000460962 KDM5CP41229 1560 aa16.4■□□□□ 0.22
GCOM1-203ENST00000460962 ROCK2O75116 1388 aaKnown RBP16.39■□□□□ 0.21
GCOM1-203ENST00000460962 NUP155O75694 1391 aa16.38■□□□□ 0.21
GCOM1-203ENST00000460962 CARMIL2Q6F5E8 1435 aa16.38■□□□□ 0.21
GCOM1-203ENST00000460962 CARD11Q9BXL7 1154 aa16.37■□□□□ 0.21
GCOM1-203ENST00000460962 RALGAPBQ86X10 1494 aa16.37■□□□□ 0.21
GCOM1-203ENST00000460962 MAGI1Q96QZ7 1491 aaPredicted RBP16.37■□□□□ 0.21
GCOM1-203ENST00000460962 UHRF1BP1Q6BDS2 1440 aa16.37■□□□□ 0.21
GCOM1-203ENST00000460962 TMC1Q8TDI8 760 aa16.36■□□□□ 0.21
GCOM1-203ENST00000460962 BCL11AQ9H165 835 aa16.36■□□□□ 0.21
GCOM1-203ENST00000460962 CEP170Q5SW79 1584 aa16.36■□□□□ 0.21
GCOM1-203ENST00000460962 FBLN2P98095 1184 aa16.36■□□□□ 0.21
GCOM1-203ENST00000460962 PLEKHD1A6NEE1 506 aa16.35■□□□□ 0.21
GCOM1-203ENST00000460962 C9orf84Q5VXU9 1444 aa16.34■□□□□ 0.21
GCOM1-203ENST00000460962 SYNJ2O15056 1496 aa16.34■□□□□ 0.21
GCOM1-203ENST00000460962 PNISRQ8TF01 805 aaKnown RBP16.34■□□□□ 0.21
GCOM1-203ENST00000460962 ARHGEF12Q9NZN5 1544 aa16.33■□□□□ 0.21
GCOM1-203ENST00000460962 SHANK2Q9UPX8 1470 aa16.33■□□□□ 0.21
GCOM1-203ENST00000460962 JPH4Q96JJ6 628 aa16.33■□□□□ 0.21
GCOM1-203ENST00000460962 RNF123Q5XPI4 1314 aa16.33■□□□□ 0.2
GCOM1-203ENST00000460962 KIF15Q9NS87 1388 aa16.33■□□□□ 0.2
GCOM1-203ENST00000460962 TSPY4P0CV99 314 aa16.33■□□□□ 0.2
GCOM1-203ENST00000460962 TSPY10P0CW01 314 aa16.33■□□□□ 0.2
GCOM1-203ENST00000460962 CCDC136Q96JN2 1154 aa16.33■□□□□ 0.2
GCOM1-203ENST00000460962 KDM2AQ9Y2K7 1162 aa16.32■□□□□ 0.2
GCOM1-203ENST00000460962 SENP3-EIF4A1A0A087X0R7 540 aa16.32■□□□□ 0.2
GCOM1-203ENST00000460962 CDC42BPAQ5VT25 1732 aa16.31■□□□□ 0.2
GCOM1-203ENST00000460962 ST20-MTHFSA0A0A6YYL1 179 aa16.3■□□□□ 0.2
GCOM1-203ENST00000460962 DCAF11Q8TEB1 546 aa16.29■□□□□ 0.2
GCOM1-203ENST00000460962 ABCC10Q5T3U5 1492 aa16.29■□□□□ 0.2
GCOM1-203ENST00000460962 KDM5DQ9BY66 1539 aa16.28■□□□□ 0.2
GCOM1-203ENST00000460962 MYBBP1AQ9BQG0 1328 aaKnown RBP16.27■□□□□ 0.2
GCOM1-203ENST00000460962 NUP160Q12769 1436 aa16.27■□□□□ 0.2
GCOM1-203ENST00000460962 BRD4O60885 1362 aaPredicted RBP16.27■□□□□ 0.19
GCOM1-203ENST00000460962 KTN1Q86UP2 1357 aaKnown RBP16.27■□□□□ 0.19
GCOM1-203ENST00000460962 RALBP1Q15311 655 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms