RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 ATP1B4Q9UN42 357 aaPredicted RBP20.89■□□□□ 0.93
ERCC3-205ENST00000460485 DHX57Q6P158 1386 aaKnown RBP20.87■□□□□ 0.93
ERCC3-205ENST00000460485 ADAMTSL3P82987 1691 aa20.87■□□□□ 0.93
ERCC3-205ENST00000460485 SETD5Q9C0A6 1442 aa20.87■□□□□ 0.93
ERCC3-205ENST00000460485 TCOF1Q13428 1488 aaKnown RBP20.86■□□□□ 0.93
ERCC3-205ENST00000460485 PTPN23Q9H3S7 1636 aa20.86■□□□□ 0.93
ERCC3-205ENST00000460485 MIA2Q96PC5 1412 aa20.85■□□□□ 0.93
ERCC3-205ENST00000460485 ABCA8O94911 1581 aa20.82■□□□□ 0.92
ERCC3-205ENST00000460485 ITSN2Q9NZM3 1697 aa20.82■□□□□ 0.92
ERCC3-205ENST00000460485 NUP153P49790 1475 aaKnown RBP20.81■□□□□ 0.92
ERCC3-205ENST00000460485 LMTK3Q96Q04 1460 aa20.8■□□□□ 0.92
ERCC3-205ENST00000460485 AKNAQ7Z591 1439 aa20.79■□□□□ 0.92
ERCC3-205ENST00000460485 ACIN1Q9UKV3 1341 aaKnown RBP20.78■□□□□ 0.92
ERCC3-205ENST00000460485 CDK13Q14004 1512 aaKnown RBP20.78■□□□□ 0.92
ERCC3-205ENST00000460485 GCC2Q8IWJ2 1684 aa20.77■□□□□ 0.92
ERCC3-205ENST00000460485 RAB3GAP2Q9H2M9 1393 aa20.77■□□□□ 0.92
ERCC3-205ENST00000460485 CDK11AQ9UQ88 783 aaPredicted RBP20.77■□□□□ 0.92
ERCC3-205ENST00000460485 FAM50AQ14320 339 aaKnown RBP20.75■□□□□ 0.91
ERCC3-205ENST00000460485 HFM1A2PYH4 1435 aa20.75■□□□□ 0.91
ERCC3-205ENST00000460485 BCORL1Q5H9F3 1711 aa20.74■□□□□ 0.91
ERCC3-205ENST00000460485 RAPGEF3O95398 923 aa20.72■□□□□ 0.91
ERCC3-205ENST00000460485 NEO1Q92859 1461 aa20.7■□□□□ 0.9
ERCC3-205ENST00000460485 TROQ12816 1431 aaPredicted RBP20.7■□□□□ 0.9
ERCC3-205ENST00000460485 ABCA9Q8IUA7 1624 aa20.69■□□□□ 0.9
ERCC3-205ENST00000460485 CERKQ8TCT0 537 aa20.69■□□□□ 0.9
ERCC3-205ENST00000460485 ARID4BQ4LE39 1312 aaPredicted RBP20.69■□□□□ 0.9
ERCC3-205ENST00000460485 ATP10BO94823 1461 aa20.68■□□□□ 0.9
ERCC3-205ENST00000460485 MADDQ8WXG6 1647 aa20.67■□□□□ 0.9
ERCC3-205ENST00000460485 DNMT1P26358 1616 aaKnown RBP20.66■□□□□ 0.9
ERCC3-205ENST00000460485 SOCS7O14512 581 aa20.65■□□□□ 0.9
ERCC3-205ENST00000460485 KIF14Q15058 1648 aa20.64■□□□□ 0.9
ERCC3-205ENST00000460485 ITGAEP38570 1179 aa20.63■□□□□ 0.89
ERCC3-205ENST00000460485 TIMELESSQ9UNS1 1208 aa20.62■□□□□ 0.89
ERCC3-205ENST00000460485 ADGBQ8N7X0 1667 aa20.61■□□□□ 0.89
ERCC3-205ENST00000460485 ZNF316A6NFI3 1004 aaPredicted RBP20.61■□□□□ 0.89
ERCC3-205ENST00000460485 HSPA2P54652 639 aa20.61■□□□□ 0.89
ERCC3-205ENST00000460485 FRMPD1Q5SYB0 1578 aa20.59■□□□□ 0.89
ERCC3-205ENST00000460485 NAIPQ13075 1403 aa20.59■□□□□ 0.89
ERCC3-205ENST00000460485 ROCK1Q13464 1354 aa20.59■□□□□ 0.89
ERCC3-205ENST00000460485 CROCC2H7BZ55 1655 aa20.58■□□□□ 0.89
ERCC3-205ENST00000460485 ILDR2Q71H61 639 aa20.58■□□□□ 0.89
ERCC3-205ENST00000460485 RIMS1Q86UR5 1692 aaKnown RBP20.58■□□□□ 0.88
ERCC3-205ENST00000460485 POGZQ7Z3K3 1410 aa20.56■□□□□ 0.88
ERCC3-205ENST00000460485 DISP3Q9P2K9 1392 aa20.56■□□□□ 0.88
ERCC3-205ENST00000460485 ARID3CA6NKF2 412 aa20.55■□□□□ 0.88
ERCC3-205ENST00000460485 PTPRKQ15262 1439 aa20.54■□□□□ 0.88
ERCC3-205ENST00000460485 ARHGEF40Q8TER5 1519 aa20.53■□□□□ 0.88
ERCC3-205ENST00000460485 CDC42BPAQ5VT25 1732 aa20.53■□□□□ 0.88
ERCC3-205ENST00000460485 DENND4BO75064 1496 aaPredicted RBP20.53■□□□□ 0.88
ERCC3-205ENST00000460485 DAPK1P53355 1430 aa20.52■□□□□ 0.87
ERCC3-205ENST00000460485 FANCAO15360 1455 aa20.51■□□□□ 0.87
ERCC3-205ENST00000460485 CAMSAP2Q08AD1 1489 aa20.5■□□□□ 0.87
ERCC3-205ENST00000460485 RICTORQ6R327 1708 aa20.49■□□□□ 0.87
ERCC3-205ENST00000460485 SHANK2Q9UPX8 1470 aa20.49■□□□□ 0.87
ERCC3-205ENST00000460485 GPATCH8Q9UKJ3 1502 aaKnown RBP20.48■□□□□ 0.87
ERCC3-205ENST00000460485 DMRT2Q9Y5R5 561 aa20.48■□□□□ 0.87
ERCC3-205ENST00000460485 DIEXFQ68CQ4 756 aaKnown RBP20.47■□□□□ 0.87
ERCC3-205ENST00000460485 ADGRL2O95490 1459 aa20.47■□□□□ 0.87
ERCC3-205ENST00000460485 PREX2Q70Z35 1606 aa20.46■□□□□ 0.87
ERCC3-205ENST00000460485 MAGI2Q86UL8 1455 aa20.45■□□□□ 0.86
ERCC3-205ENST00000460485 ARHGEF5Q12774 1597 aa20.44■□□□□ 0.86
ERCC3-205ENST00000460485 PLEKHD1A6NEE1 506 aa20.44■□□□□ 0.86
ERCC3-205ENST00000460485 YEATS2Q9ULM3 1422 aa20.44■□□□□ 0.86
ERCC3-205ENST00000460485 ZMYM4Q5VZL5 1548 aa20.43■□□□□ 0.86
ERCC3-205ENST00000460485 PLPPR3Q6T4P5 718 aa20.43■□□□□ 0.86
ERCC3-205ENST00000460485 ABCC5O15440 1437 aa20.42■□□□□ 0.86
ERCC3-205ENST00000460485 TTC37Q6PGP7 1564 aa20.42■□□□□ 0.86
ERCC3-205ENST00000460485 CFAP74Q9C0B2 1584 aa20.42■□□□□ 0.86
ERCC3-205ENST00000460485 ZFYVE16Q7Z3T8 1539 aa20.39■□□□□ 0.85
ERCC3-205ENST00000460485 MYO5CQ9NQX4 1742 aa20.39■□□□□ 0.85
ERCC3-205ENST00000460485 CFDP1Q9UEE9 299 aaPredicted RBP20.38■□□□□ 0.85
ERCC3-205ENST00000460485 FER1L4A9Z1Z3 1794 aa20.38■□□□□ 0.85
ERCC3-205ENST00000460485 SETD1BQ9UPS6 1966 aaKnown RBP20.37■□□□□ 0.85
ERCC3-205ENST00000460485 SIGLEC1Q9BZZ2 1709 aa20.37■□□□□ 0.85
ERCC3-205ENST00000460485 MLECQ14165 292 aa20.36■□□□□ 0.85
ERCC3-205ENST00000460485 PREX1Q8TCU6 1659 aa20.35■□□□□ 0.85
ERCC3-205ENST00000460485 CDC42BPBQ9Y5S2 1711 aa20.35■□□□□ 0.85
ERCC3-205ENST00000460485 STRCQ7RTU9 1775 aa20.34■□□□□ 0.85
ERCC3-205ENST00000460485 ARHGEF12Q9NZN5 1544 aa20.33■□□□□ 0.85
ERCC3-205ENST00000460485 PLEKHH2Q8IVE3 1493 aa20.33■□□□□ 0.85
ERCC3-205ENST00000460485 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.32■□□□□ 0.84
ERCC3-205ENST00000460485 ATP10AO60312 1499 aa20.31■□□□□ 0.84
ERCC3-205ENST00000460485 SPATA31D1Q6ZQQ2 1576 aa20.31■□□□□ 0.84
ERCC3-205ENST00000460485 MAST1Q9Y2H9 1570 aa20.31■□□□□ 0.84
ERCC3-205ENST00000460485 ANKRD30AQ9BXX3 1397 aa20.31■□□□□ 0.84
ERCC3-205ENST00000460485 TONSLQ96HA7 1378 aa20.3■□□□□ 0.84
ERCC3-205ENST00000460485 PTPRTO14522 1441 aa20.29■□□□□ 0.84
ERCC3-205ENST00000460485 NCOA1Q15788 1441 aa20.29■□□□□ 0.84
ERCC3-205ENST00000460485 RSPH4AQ5TD94 716 aa20.29■□□□□ 0.84
ERCC3-205ENST00000460485 SCAPERQ9BY12 1400 aa20.27■□□□□ 0.84
ERCC3-205ENST00000460485 CEBPAP49715 358 aaPredicted RBP20.27■□□□□ 0.84
ERCC3-205ENST00000460485 C9orf84Q5VXU9 1444 aa20.27■□□□□ 0.83
ERCC3-205ENST00000460485 UHRF1BP1Q6BDS2 1440 aa20.27■□□□□ 0.83
ERCC3-205ENST00000460485 SAMD9LQ8IVG5 1584 aa20.26■□□□□ 0.83
ERCC3-205ENST00000460485 CCDC141Q6ZP82 1450 aa20.26■□□□□ 0.83
ERCC3-205ENST00000460485 KDM5DQ9BY66 1539 aa20.26■□□□□ 0.83
ERCC3-205ENST00000460485 PLCH2O75038 1416 aa20.26■□□□□ 0.83
ERCC3-205ENST00000460485 IQSEC2Q5JU85 1478 aa20.25■□□□□ 0.83
ERCC3-205ENST00000460485 RRP7BPQ9NSQ0 103 aa20.25■□□□□ 0.83
ERCC3-205ENST00000460485 PLXNC1O60486 1568 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 313.8 ms