RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 CDC42BPAQ5VT25 1732 aa28.16■■■□□ 2.1
PLOD3-209ENST00000460475 MAP3K1Q13233 1512 aa28.16■■■□□ 2.1
PLOD3-209ENST00000460475 RICTORQ6R327 1708 aa28.15■■■□□ 2.1
PLOD3-209ENST00000460475 ARHGAP5Q13017 1502 aa28.15■■■□□ 2.1
PLOD3-209ENST00000460475 ADGRL1O94910 1474 aa28.15■■■□□ 2.1
PLOD3-209ENST00000460475 GPATCH8Q9UKJ3 1502 aaKnown RBP28.13■■■□□ 2.09
PLOD3-209ENST00000460475 SCAPERQ9BY12 1400 aa28.12■■■□□ 2.09
PLOD3-209ENST00000460475 CCNB3Q8WWL7 1395 aa28.07■■■□□ 2.08
PLOD3-209ENST00000460475 POGZQ7Z3K3 1410 aa28.07■■■□□ 2.08
PLOD3-209ENST00000460475 ZMYM4Q5VZL5 1548 aa28.07■■■□□ 2.08
PLOD3-209ENST00000460475 LRRC9Q6ZRR7 1453 aa28.06■■■□□ 2.08
PLOD3-209ENST00000460475 SUPT6HQ7KZ85 1726 aaKnown RBP28.04■■■□□ 2.08
PLOD3-209ENST00000460475 MAGI2Q86UL8 1455 aa28.02■■■□□ 2.08
PLOD3-209ENST00000460475 ABCC1P33527 1531 aa28.01■■■□□ 2.07
PLOD3-209ENST00000460475 NCOA2Q15596 1464 aa28.01■■■□□ 2.07
PLOD3-209ENST00000460475 CFDP1Q9UEE9 299 aaPredicted RBP28■■■□□ 2.07
PLOD3-209ENST00000460475 KANK4Q5T7N3 995 aaPredicted RBP27.99■■■□□ 2.07
PLOD3-209ENST00000460475 ZNF518AQ6AHZ1 1483 aa27.99■■■□□ 2.07
PLOD3-209ENST00000460475 ARHGEF12Q9NZN5 1544 aa27.98■■■□□ 2.07
PLOD3-209ENST00000460475 SAMD9LQ8IVG5 1584 aa27.98■■■□□ 2.07
PLOD3-209ENST00000460475 ITSN2Q9NZM3 1697 aa27.97■■■□□ 2.07
PLOD3-209ENST00000460475 KDM4FA0A1W2PPD8 638 aa27.97■■■□□ 2.07
PLOD3-209ENST00000460475 KDM5CP41229 1560 aa27.97■■■□□ 2.07
PLOD3-209ENST00000460475 ARHGEF40Q8TER5 1519 aa27.97■■■□□ 2.07
PLOD3-209ENST00000460475 AFAP1Q8N556 730 aa27.95■■■□□ 2.06
PLOD3-209ENST00000460475 APLP2Q06481 763 aa27.94■■■□□ 2.06
PLOD3-209ENST00000460475 KIAA1107Q9UPP5 1409 aa27.93■■■□□ 2.06
PLOD3-209ENST00000460475 ZNF777Q9ULD5 760 aaPredicted RBP27.93■■■□□ 2.06
PLOD3-209ENST00000460475 PLEKHH2Q8IVE3 1493 aa27.93■■■□□ 2.06
PLOD3-209ENST00000460475 TRAPPC8Q9Y2L5 1435 aa27.92■■■□□ 2.06
PLOD3-209ENST00000460475 ZFYVE16Q7Z3T8 1539 aa27.92■■■□□ 2.06
PLOD3-209ENST00000460475 YEATS2Q9ULM3 1422 aa27.92■■■□□ 2.06
PLOD3-209ENST00000460475 MLH3Q9UHC1 1453 aa27.89■■■□□ 2.05
PLOD3-209ENST00000460475 SYCP2Q9BX26 1530 aa27.88■■■□□ 2.05
PLOD3-209ENST00000460475 HECW2Q9P2P5 1572 aa27.86■■■□□ 2.05
PLOD3-209ENST00000460475 HNRNPMP52272 730 aaKnown RBP eCLIP27.85■■■□□ 2.05
PLOD3-209ENST00000460475 ZNF644Q9H582 1327 aaPredicted RBP27.85■■■□□ 2.05
PLOD3-209ENST00000460475 AEBP2Q6ZN18 517 aaPredicted RBP27.84■■■□□ 2.05
PLOD3-209ENST00000460475 ATP10AO60312 1499 aa27.83■■■□□ 2.05
PLOD3-209ENST00000460475 MBD5Q9P267 1494 aa27.82■■■□□ 2.04
PLOD3-209ENST00000460475 KIDINS220Q9ULH0 1771 aa27.79■■■□□ 2.04
PLOD3-209ENST00000460475 MYOM3Q5VTT5 1437 aa27.79■■■□□ 2.04
PLOD3-209ENST00000460475 MIA2Q96PC5 1412 aa27.78■■■□□ 2.04
PLOD3-209ENST00000460475 SIGLEC1Q9BZZ2 1709 aa27.78■■■□□ 2.04
PLOD3-209ENST00000460475 DIP2CQ9Y2E4 1556 aa27.77■■■□□ 2.04
PLOD3-209ENST00000460475 CAMSAP2Q08AD1 1489 aa27.77■■■□□ 2.04
PLOD3-209ENST00000460475 C9orf84Q5VXU9 1444 aa27.77■■■□□ 2.04
PLOD3-209ENST00000460475 BCORL1Q5H9F3 1711 aa27.76■■■□□ 2.03
PLOD3-209ENST00000460475 ADAMTSL3P82987 1691 aa27.75■■■□□ 2.03
PLOD3-209ENST00000460475 ABCA6Q8N139 1617 aa27.75■■■□□ 2.03
PLOD3-209ENST00000460475 SPAG9O60271 1321 aaKnown RBP27.75■■■□□ 2.03
PLOD3-209ENST00000460475 ARID4BQ4LE39 1312 aaPredicted RBP27.75■■■□□ 2.03
PLOD3-209ENST00000460475 REREQ9P2R6 1566 aa27.75■■■□□ 2.03
PLOD3-209ENST00000460475 RSPH4AQ5TD94 716 aa27.73■■■□□ 2.03
PLOD3-209ENST00000460475 MYT1LQ9UL68 1186 aa27.73■■■□□ 2.03
PLOD3-209ENST00000460475 INO80Q9ULG1 1556 aaPredicted RBP27.72■■■□□ 2.03
PLOD3-209ENST00000460475 ATP7AQ04656 1500 aa27.71■■■□□ 2.03
PLOD3-209ENST00000460475 ARHGEF5Q12774 1597 aa27.69■■■□□ 2.02
PLOD3-209ENST00000460475 CCDC141Q6ZP82 1450 aa27.69■■■□□ 2.02
PLOD3-209ENST00000460475 RTEL1-TNFRSF6BF6WH68 1400 aa27.67■■■□□ 2.02
PLOD3-209ENST00000460475 AGLP35573 1532 aa27.66■■■□□ 2.02
PLOD3-209ENST00000460475 FGD6Q6ZV73 1430 aa27.62■■■□□ 2.01
PLOD3-209ENST00000460475 MADDQ8WXG6 1647 aa27.62■■■□□ 2.01
PLOD3-209ENST00000460475 PTPN23Q9H3S7 1636 aa27.59■■■□□ 2.01
PLOD3-209ENST00000460475 TCOF1Q13428 1488 aaKnown RBP27.59■■■□□ 2.01
PLOD3-209ENST00000460475 ADGBQ8N7X0 1667 aa27.58■■■□□ 2.01
PLOD3-209ENST00000460475 PTPRMP28827 1452 aa27.57■■■□□ 2
PLOD3-209ENST00000460475 PLXNC1O60486 1568 aa27.57■■■□□ 2
PLOD3-209ENST00000460475 TSPY4P0CV99 314 aa27.57■■■□□ 2
PLOD3-209ENST00000460475 TSPY10P0CW01 314 aa27.57■■■□□ 2
PLOD3-209ENST00000460475 A2MP01023 1474 aa27.57■■■□□ 2
PLOD3-209ENST00000460475 MLECQ14165 292 aa27.56■■■□□ 2
PLOD3-209ENST00000460475 MAST1Q9Y2H9 1570 aa27.55■■■□□ 2
PLOD3-209ENST00000460475 RIMS1Q86UR5 1692 aaKnown RBP27.53■■■□□ 2
PLOD3-209ENST00000460475 FER1L4A9Z1Z3 1794 aa27.53■■■□□ 2
PLOD3-209ENST00000460475 DHX29Q7Z478 1369 aaKnown RBP27.5■■□□□ 1.99
PLOD3-209ENST00000460475 ABCC5O15440 1437 aa27.49■■□□□ 1.99
PLOD3-209ENST00000460475 SHANK2Q9UPX8 1470 aa27.47■■□□□ 1.99
PLOD3-209ENST00000460475 DNMT1P26358 1616 aaKnown RBP27.47■■□□□ 1.99
PLOD3-209ENST00000460475 CROCC2H7BZ55 1655 aa27.46■■□□□ 1.99
PLOD3-209ENST00000460475 DAPK1P53355 1430 aa27.45■■□□□ 1.98
PLOD3-209ENST00000460475 PPARGC1BQ86YN6 1023 aaKnown RBP27.41■■□□□ 1.98
PLOD3-209ENST00000460475 PPP6R1Q9UPN7 881 aa27.38■■□□□ 1.97
PLOD3-209ENST00000460475 CNTLNQ9NXG0 1405 aa27.38■■□□□ 1.97
PLOD3-209ENST00000460475 FAM50AQ14320 339 aaKnown RBP27.37■■□□□ 1.97
PLOD3-209ENST00000460475 ESF1Q9H501 851 aaKnown RBP27.35■■□□□ 1.97
PLOD3-209ENST00000460475 GGT6Q6P531 493 aa27.34■■□□□ 1.97
PLOD3-209ENST00000460475 DUOX2Q9NRD8 1548 aa27.34■■□□□ 1.97
PLOD3-209ENST00000460475 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.34■■□□□ 1.97
PLOD3-209ENST00000460475 KIF3BO15066 747 aa27.33■■□□□ 1.97
PLOD3-209ENST00000460475 MROH2AA6NES4 1674 aa27.33■■□□□ 1.97
PLOD3-209ENST00000460475 EIF2AK4Q9P2K8 1649 aaKnown RBP27.31■■□□□ 1.96
PLOD3-209ENST00000460475 KIF15Q9NS87 1388 aa27.31■■□□□ 1.96
PLOD3-209ENST00000460475 SETD1BQ9UPS6 1966 aaKnown RBP27.31■■□□□ 1.96
PLOD3-209ENST00000460475 C3P01024 1663 aa27.3■■□□□ 1.96
PLOD3-209ENST00000460475 CEBPAP49715 358 aaPredicted RBP27.3■■□□□ 1.96
PLOD3-209ENST00000460475 NCOA1Q15788 1441 aa27.3■■□□□ 1.96
PLOD3-209ENST00000460475 ADGRL2O95490 1459 aa27.3■■□□□ 1.96
PLOD3-209ENST00000460475 ANKRD30AQ9BXX3 1397 aa27.29■■□□□ 1.96
PLOD3-209ENST00000460475 FAM135AQ9P2D6 1515 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms