RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 WDR7Q9Y4E6 1490 aa15.74■□□□□ 0.11
VPS45-204ENST00000460366 CCDC18Q5T9S5 1454 aa15.73■□□□□ 0.11
VPS45-204ENST00000460366 PCF11O94913 1555 aaKnown RBP15.72■□□□□ 0.11
VPS45-204ENST00000460366 FAM69CQ0P6D2 419 aa15.72■□□□□ 0.11
VPS45-204ENST00000460366 CDK13Q14004 1512 aaKnown RBP15.69■□□□□ 0.1
VPS45-204ENST00000460366 GLI2P10070 1586 aa15.69■□□□□ 0.1
VPS45-204ENST00000460366 KCNH8Q96L42 1107 aa15.68■□□□□ 0.1
VPS45-204ENST00000460366 DIP2BQ9P265 1576 aa15.67■□□□□ 0.1
VPS45-204ENST00000460366 TROQ12816 1431 aaPredicted RBP15.65■□□□□ 0.1
VPS45-204ENST00000460366 MAP3K1Q13233 1512 aa15.63■□□□□ 0.09
VPS45-204ENST00000460366 KIF13AQ9H1H9 1805 aa15.62■□□□□ 0.09
VPS45-204ENST00000460366 LRRIQ1Q96JM4 1722 aa15.62■□□□□ 0.09
VPS45-204ENST00000460366 CD109Q6YHK3 1445 aa15.6■□□□□ 0.09
VPS45-204ENST00000460366 MTUS2Q5JR59 1369 aa15.59■□□□□ 0.09
VPS45-204ENST00000460366 ABCA9Q8IUA7 1624 aa15.57■□□□□ 0.08
VPS45-204ENST00000460366 MAGI3Q5TCQ9 1506 aa15.57■□□□□ 0.08
VPS45-204ENST00000460366 MAP3K4Q9Y6R4 1608 aa15.57■□□□□ 0.08
VPS45-204ENST00000460366 TIAM1Q13009 1591 aa15.56■□□□□ 0.08
VPS45-204ENST00000460366 CFAP43Q8NDM7 1665 aa15.56■□□□□ 0.08
VPS45-204ENST00000460366 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.55■□□□□ 0.08
VPS45-204ENST00000460366 TEX14Q8IWB6 1497 aa15.54■□□□□ 0.08
VPS45-204ENST00000460366 ZBTB12Q9Y330 459 aaPredicted RBP15.54■□□□□ 0.08
VPS45-204ENST00000460366 KIF14Q15058 1648 aa15.54■□□□□ 0.08
VPS45-204ENST00000460366 PHLDB1Q86UU1 1377 aa15.53■□□□□ 0.08
VPS45-204ENST00000460366 EHBP1L1Q8N3D4 1523 aa15.53■□□□□ 0.08
VPS45-204ENST00000460366 LRRC9Q6ZRR7 1453 aa15.52■□□□□ 0.08
VPS45-204ENST00000460366 PLCH2O75038 1416 aa15.51■□□□□ 0.07
VPS45-204ENST00000460366 KANK4Q5T7N3 995 aaPredicted RBP15.51■□□□□ 0.07
VPS45-204ENST00000460366 ARAP3Q8WWN8 1544 aa15.49■□□□□ 0.07
VPS45-204ENST00000460366 TTC37Q6PGP7 1564 aa15.49■□□□□ 0.07
VPS45-204ENST00000460366 PPRC1Q5VV67 1664 aaKnown RBP15.48■□□□□ 0.07
VPS45-204ENST00000460366 NEO1Q92859 1461 aa15.48■□□□□ 0.07
VPS45-204ENST00000460366 EFCAB2Q5VUJ9 269 aa15.48■□□□□ 0.07
VPS45-204ENST00000460366 TSPOAP1O95153 1857 aa15.47■□□□□ 0.07
VPS45-204ENST00000460366 CCNB3Q8WWL7 1395 aa15.47■□□□□ 0.07
VPS45-204ENST00000460366 GPATCH8Q9UKJ3 1502 aaKnown RBP15.45■□□□□ 0.06
VPS45-204ENST00000460366 FANCAO15360 1455 aa15.45■□□□□ 0.06
VPS45-204ENST00000460366 NCOA2Q15596 1464 aa15.45■□□□□ 0.06
VPS45-204ENST00000460366 RBM42Q9BTD8 480 aaKnown RBP15.44■□□□□ 0.06
VPS45-204ENST00000460366 SUPT6HQ7KZ85 1726 aaKnown RBP15.43■□□□□ 0.06
VPS45-204ENST00000460366 AKNAQ7Z591 1439 aa15.43■□□□□ 0.06
VPS45-204ENST00000460366 CFDP1Q9UEE9 299 aaPredicted RBP15.42■□□□□ 0.06
VPS45-204ENST00000460366 MYO5CQ9NQX4 1742 aa15.42■□□□□ 0.06
VPS45-204ENST00000460366 CFAP74Q9C0B2 1584 aa15.41■□□□□ 0.06
VPS45-204ENST00000460366 ARHGAP5Q13017 1502 aa15.4■□□□□ 0.06
VPS45-204ENST00000460366 COL17A1Q9UMD9 1497 aaPredicted RBP15.4■□□□□ 0.06
VPS45-204ENST00000460366 PREX2Q70Z35 1606 aa15.39■□□□□ 0.05
VPS45-204ENST00000460366 CDC42BPAQ5VT25 1732 aa15.38■□□□□ 0.05
VPS45-204ENST00000460366 MKRN4PQ13434 485 aaPredicted RBP15.38■□□□□ 0.05
VPS45-204ENST00000460366 CDC42BPBQ9Y5S2 1711 aa15.37■□□□□ 0.05
VPS45-204ENST00000460366 MIA2Q96PC5 1412 aa15.37■□□□□ 0.05
VPS45-204ENST00000460366 DENND4BO75064 1496 aaPredicted RBP15.37■□□□□ 0.05
VPS45-204ENST00000460366 KDM6BO15054 1643 aa15.36■□□□□ 0.05
VPS45-204ENST00000460366 MYOM3Q5VTT5 1437 aa15.36■□□□□ 0.05
VPS45-204ENST00000460366 SCAPERQ9BY12 1400 aa15.36■□□□□ 0.05
VPS45-204ENST00000460366 KIAA1107Q9UPP5 1409 aa15.36■□□□□ 0.05
VPS45-204ENST00000460366 ADGRL1O94910 1474 aa15.36■□□□□ 0.05
VPS45-204ENST00000460366 PLEKHH2Q8IVE3 1493 aa15.36■□□□□ 0.05
VPS45-204ENST00000460366 ZNF777Q9ULD5 760 aaPredicted RBP15.35■□□□□ 0.05
VPS45-204ENST00000460366 ITSN2Q9NZM3 1697 aa15.35■□□□□ 0.05
VPS45-204ENST00000460366 RAPGEF3O95398 923 aa15.33■□□□□ 0.04
VPS45-204ENST00000460366 RSPH4AQ5TD94 716 aa15.33■□□□□ 0.04
VPS45-204ENST00000460366 ZNF644Q9H582 1327 aaPredicted RBP15.31■□□□□ 0.04
VPS45-204ENST00000460366 POGZQ7Z3K3 1410 aa15.31■□□□□ 0.04
VPS45-204ENST00000460366 ABCC1P33527 1531 aa15.31■□□□□ 0.04
VPS45-204ENST00000460366 SAMD9LQ8IVG5 1584 aa15.3■□□□□ 0.04
VPS45-204ENST00000460366 ARHGEF12Q9NZN5 1544 aa15.29■□□□□ 0.04
VPS45-204ENST00000460366 ZNF518AQ6AHZ1 1483 aa15.29■□□□□ 0.04
VPS45-204ENST00000460366 FGD6Q6ZV73 1430 aa15.29■□□□□ 0.04
VPS45-204ENST00000460366 HNRNPMP52272 730 aaKnown RBP eCLIP15.29■□□□□ 0.04
VPS45-204ENST00000460366 ILDR1Q86SU0 546 aaPredicted RBP15.29■□□□□ 0.04
VPS45-204ENST00000460366 PPARGC1BQ86YN6 1023 aaKnown RBP15.28■□□□□ 0.04
VPS45-204ENST00000460366 AFAP1Q8N556 730 aa15.28■□□□□ 0.04
VPS45-204ENST00000460366 MAGI2Q86UL8 1455 aa15.27■□□□□ 0.04
VPS45-204ENST00000460366 MBD5Q9P267 1494 aa15.27■□□□□ 0.04
VPS45-204ENST00000460366 TRAPPC8Q9Y2L5 1435 aa15.27■□□□□ 0.04
VPS45-204ENST00000460366 CAMSAP2Q08AD1 1489 aa15.27■□□□□ 0.03
VPS45-204ENST00000460366 FRMPD1Q5SYB0 1578 aa15.26■□□□□ 0.03
VPS45-204ENST00000460366 ZMYM4Q5VZL5 1548 aa15.26■□□□□ 0.03
VPS45-204ENST00000460366 TCOF1Q13428 1488 aaKnown RBP15.26■□□□□ 0.03
VPS45-204ENST00000460366 RICTORQ6R327 1708 aa15.26■□□□□ 0.03
VPS45-204ENST00000460366 SYCP2Q9BX26 1530 aa15.25■□□□□ 0.03
VPS45-204ENST00000460366 KDM5CP41229 1560 aa15.24■□□□□ 0.03
VPS45-204ENST00000460366 MLH3Q9UHC1 1453 aa15.24■□□□□ 0.03
VPS45-204ENST00000460366 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.23■□□□□ 0.03
VPS45-204ENST00000460366 SPAG9O60271 1321 aaKnown RBP15.22■□□□□ 0.03
VPS45-204ENST00000460366 PTPN23Q9H3S7 1636 aa15.22■□□□□ 0.03
VPS45-204ENST00000460366 TSPY4P0CV99 314 aa15.22■□□□□ 0.03
VPS45-204ENST00000460366 TSPY10P0CW01 314 aa15.22■□□□□ 0.03
VPS45-204ENST00000460366 ARHGEF5Q12774 1597 aa15.22■□□□□ 0.03
VPS45-204ENST00000460366 CCDC141Q6ZP82 1450 aa15.21■□□□□ 0.03
VPS45-204ENST00000460366 RTEL1-TNFRSF6BF6WH68 1400 aa15.21■□□□□ 0.03
VPS45-204ENST00000460366 AKT1S1Q96B36 256 aa15.2■□□□□ 0.02
VPS45-204ENST00000460366 RRBP1Q9P2E9 1410 aaKnown RBP15.19■□□□□ 0.02
VPS45-204ENST00000460366 ZFYVE16Q7Z3T8 1539 aa15.18■□□□□ 0.02
VPS45-204ENST00000460366 FAM50AQ14320 339 aaKnown RBP15.18■□□□□ 0.02
VPS45-204ENST00000460366 MYT1LQ9UL68 1186 aa15.18■□□□□ 0.02
VPS45-204ENST00000460366 ABCC5O15440 1437 aa15.17■□□□□ 0.02
VPS45-204ENST00000460366 HECW2Q9P2P5 1572 aa15.17■□□□□ 0.02
VPS45-204ENST00000460366 ATP10AO60312 1499 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms