RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 EHBP1L1Q8N3D4 1523 aa23.43■■□□□ 1.34
CMTM3-203ENST00000460097 LRRC9Q6ZRR7 1453 aa23.43■■□□□ 1.34
CMTM3-203ENST00000460097 PLCH2O75038 1416 aa23.42■■□□□ 1.34
CMTM3-203ENST00000460097 EFCAB2Q5VUJ9 269 aa23.37■■□□□ 1.33
CMTM3-203ENST00000460097 PHLDB1Q86UU1 1377 aa23.37■■□□□ 1.33
CMTM3-203ENST00000460097 FANCAO15360 1455 aa23.36■■□□□ 1.33
CMTM3-203ENST00000460097 NEO1Q92859 1461 aa23.36■■□□□ 1.33
CMTM3-203ENST00000460097 MYO5CQ9NQX4 1742 aa23.36■■□□□ 1.33
CMTM3-203ENST00000460097 CCNB3Q8WWL7 1395 aa23.35■■□□□ 1.33
CMTM3-203ENST00000460097 ARAP3Q8WWN8 1544 aa23.33■■□□□ 1.33
CMTM3-203ENST00000460097 SUPT6HQ7KZ85 1726 aaKnown RBP23.33■■□□□ 1.33
CMTM3-203ENST00000460097 GPATCH8Q9UKJ3 1502 aaKnown RBP23.33■■□□□ 1.32
CMTM3-203ENST00000460097 NCOA2Q15596 1464 aa23.32■■□□□ 1.32
CMTM3-203ENST00000460097 AKNAQ7Z591 1439 aa23.32■■□□□ 1.32
CMTM3-203ENST00000460097 KDM6BO15054 1643 aa23.32■■□□□ 1.32
CMTM3-203ENST00000460097 ARHGAP5Q13017 1502 aa23.31■■□□□ 1.32
CMTM3-203ENST00000460097 ZNF316A6NFI3 1004 aaPredicted RBP23.31■■□□□ 1.32
CMTM3-203ENST00000460097 COL17A1Q9UMD9 1497 aaPredicted RBP23.3■■□□□ 1.32
CMTM3-203ENST00000460097 CFDP1Q9UEE9 299 aaPredicted RBP23.3■■□□□ 1.32
CMTM3-203ENST00000460097 CFAP74Q9C0B2 1584 aa23.29■■□□□ 1.32
CMTM3-203ENST00000460097 CDC42BPAQ5VT25 1732 aa23.28■■□□□ 1.32
CMTM3-203ENST00000460097 PREX2Q70Z35 1606 aa23.28■■□□□ 1.32
CMTM3-203ENST00000460097 CDC42BPBQ9Y5S2 1711 aa23.28■■□□□ 1.32
CMTM3-203ENST00000460097 ZNF777Q9ULD5 760 aaPredicted RBP23.27■■□□□ 1.32
CMTM3-203ENST00000460097 RAPGEF3O95398 923 aa23.24■■□□□ 1.31
CMTM3-203ENST00000460097 ADGRL1O94910 1474 aa23.23■■□□□ 1.31
CMTM3-203ENST00000460097 SCAPERQ9BY12 1400 aa23.23■■□□□ 1.31
CMTM3-203ENST00000460097 DENND4BO75064 1496 aaPredicted RBP23.22■■□□□ 1.31
CMTM3-203ENST00000460097 ITSN2Q9NZM3 1697 aa23.2■■□□□ 1.3
CMTM3-203ENST00000460097 MYOM3Q5VTT5 1437 aa23.16■■□□□ 1.3
CMTM3-203ENST00000460097 ZNF644Q9H582 1327 aaPredicted RBP23.16■■□□□ 1.3
CMTM3-203ENST00000460097 HNRNPMP52272 730 aaKnown RBP eCLIP23.14■■□□□ 1.3
CMTM3-203ENST00000460097 SAMD9LQ8IVG5 1584 aa23.14■■□□□ 1.3
CMTM3-203ENST00000460097 PLEKHH2Q8IVE3 1493 aa23.14■■□□□ 1.3
CMTM3-203ENST00000460097 AFAP1Q8N556 730 aa23.14■■□□□ 1.29
CMTM3-203ENST00000460097 MIA2Q96PC5 1412 aa23.13■■□□□ 1.29
CMTM3-203ENST00000460097 KIAA1107Q9UPP5 1409 aa23.13■■□□□ 1.29
CMTM3-203ENST00000460097 ABCC1P33527 1531 aa23.13■■□□□ 1.29
CMTM3-203ENST00000460097 POGZQ7Z3K3 1410 aa23.12■■□□□ 1.29
CMTM3-203ENST00000460097 ARHGEF12Q9NZN5 1544 aa23.12■■□□□ 1.29
CMTM3-203ENST00000460097 RICTORQ6R327 1708 aa23.1■■□□□ 1.29
CMTM3-203ENST00000460097 CLSPNQ9HAW4 1339 aa23.1■■□□□ 1.29
CMTM3-203ENST00000460097 ZNF518AQ6AHZ1 1483 aa23.1■■□□□ 1.29
CMTM3-203ENST00000460097 FRMPD1Q5SYB0 1578 aa23.1■■□□□ 1.29
CMTM3-203ENST00000460097 TRAPPC8Q9Y2L5 1435 aa23.09■■□□□ 1.29
CMTM3-203ENST00000460097 SYCP2Q9BX26 1530 aa23.08■■□□□ 1.29
CMTM3-203ENST00000460097 CAMSAP2Q08AD1 1489 aa23.07■■□□□ 1.28
CMTM3-203ENST00000460097 RSPH4AQ5TD94 716 aa23.06■■□□□ 1.28
CMTM3-203ENST00000460097 MYT1LQ9UL68 1186 aa23.06■■□□□ 1.28
CMTM3-203ENST00000460097 FGD6Q6ZV73 1430 aa23.05■■□□□ 1.28
CMTM3-203ENST00000460097 MBD5Q9P267 1494 aa23.04■■□□□ 1.28
CMTM3-203ENST00000460097 ZMYM4Q5VZL5 1548 aa23.03■■□□□ 1.28
CMTM3-203ENST00000460097 MAGI2Q86UL8 1455 aa23.03■■□□□ 1.28
CMTM3-203ENST00000460097 KDM5CP41229 1560 aa23.02■■□□□ 1.27
CMTM3-203ENST00000460097 SPAG9O60271 1321 aaKnown RBP23.01■■□□□ 1.27
CMTM3-203ENST00000460097 PTPN23Q9H3S7 1636 aa23■■□□□ 1.27
CMTM3-203ENST00000460097 MLH3Q9UHC1 1453 aa22.99■■□□□ 1.27
CMTM3-203ENST00000460097 TSPY4P0CV99 314 aa22.98■■□□□ 1.27
CMTM3-203ENST00000460097 TSPY10P0CW01 314 aa22.98■■□□□ 1.27
CMTM3-203ENST00000460097 TCOF1Q13428 1488 aaKnown RBP22.97■■□□□ 1.27
CMTM3-203ENST00000460097 FAM50AQ14320 339 aaKnown RBP22.97■■□□□ 1.27
CMTM3-203ENST00000460097 YEATS2Q9ULM3 1422 aa22.97■■□□□ 1.27
CMTM3-203ENST00000460097 CCDC141Q6ZP82 1450 aa22.97■■□□□ 1.27
CMTM3-203ENST00000460097 ZFYVE16Q7Z3T8 1539 aa22.97■■□□□ 1.27
CMTM3-203ENST00000460097 HECW2Q9P2P5 1572 aa22.95■■□□□ 1.26
CMTM3-203ENST00000460097 ARHGEF5Q12774 1597 aa22.95■■□□□ 1.26
CMTM3-203ENST00000460097 ARHGEF40Q8TER5 1519 aa22.92■■□□□ 1.26
CMTM3-203ENST00000460097 RTEL1-TNFRSF6BF6WH68 1400 aa22.91■■□□□ 1.26
CMTM3-203ENST00000460097 ATP10AO60312 1499 aa22.91■■□□□ 1.26
CMTM3-203ENST00000460097 KIDINS220Q9ULH0 1771 aa22.9■■□□□ 1.26
CMTM3-203ENST00000460097 MIER1Q8N108 512 aa22.89■■□□□ 1.26
CMTM3-203ENST00000460097 ATP7AQ04656 1500 aa22.89■■□□□ 1.25
CMTM3-203ENST00000460097 ABCC5O15440 1437 aa22.89■■□□□ 1.25
CMTM3-203ENST00000460097 ARID4BQ4LE39 1312 aaPredicted RBP22.88■■□□□ 1.25
CMTM3-203ENST00000460097 DAPK1P53355 1430 aa22.87■■□□□ 1.25
CMTM3-203ENST00000460097 INO80Q9ULG1 1556 aaPredicted RBP22.86■■□□□ 1.25
CMTM3-203ENST00000460097 C9orf84Q5VXU9 1444 aa22.86■■□□□ 1.25
CMTM3-203ENST00000460097 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.86■■□□□ 1.25
CMTM3-203ENST00000460097 RRBP1Q9P2E9 1410 aaKnown RBP22.85■■□□□ 1.25
CMTM3-203ENST00000460097 DIP2CQ9Y2E4 1556 aa22.85■■□□□ 1.25
CMTM3-203ENST00000460097 ABCA6Q8N139 1617 aa22.84■■□□□ 1.25
CMTM3-203ENST00000460097 DNMT1P26358 1616 aaKnown RBP22.84■■□□□ 1.25
CMTM3-203ENST00000460097 CHIC2Q9UKJ5 165 aa22.82■■□□□ 1.24
CMTM3-203ENST00000460097 MAST1Q9Y2H9 1570 aa22.81■■□□□ 1.24
CMTM3-203ENST00000460097 SHANK2Q9UPX8 1470 aa22.81■■□□□ 1.24
CMTM3-203ENST00000460097 A2MP01023 1474 aa22.79■■□□□ 1.24
CMTM3-203ENST00000460097 ITGAEP38570 1179 aa22.79■■□□□ 1.24
CMTM3-203ENST00000460097 REREQ9P2R6 1566 aa22.79■■□□□ 1.24
CMTM3-203ENST00000460097 CROCC2H7BZ55 1655 aa22.77■■□□□ 1.24
CMTM3-203ENST00000460097 DHX29Q7Z478 1369 aaKnown RBP22.77■■□□□ 1.24
CMTM3-203ENST00000460097 RRP7BPQ9NSQ0 103 aa22.77■■□□□ 1.24
CMTM3-203ENST00000460097 MLECQ14165 292 aa22.76■■□□□ 1.23
CMTM3-203ENST00000460097 ANKRD30AQ9BXX3 1397 aa22.75■■□□□ 1.23
CMTM3-203ENST00000460097 ADGBQ8N7X0 1667 aa22.75■■□□□ 1.23
CMTM3-203ENST00000460097 SIGLEC1Q9BZZ2 1709 aa22.75■■□□□ 1.23
CMTM3-203ENST00000460097 KDM4FA0A1W2PPD8 638 aa22.75■■□□□ 1.23
CMTM3-203ENST00000460097 YTHDC1Q96MU7 727 aaKnown RBP22.74■■□□□ 1.23
CMTM3-203ENST00000460097 PTPRKQ15262 1439 aa22.74■■□□□ 1.23
CMTM3-203ENST00000460097 AGLP35573 1532 aa22.74■■□□□ 1.23
CMTM3-203ENST00000460097 NCOA1Q15788 1441 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms