RNA–Protein interactions for RNA: ENST00000460007.1

SVIL-204, Transcript of supervillin, humanhuman

TSL 3

Gene SVIL, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-204ENST00000460007 MAP3K1Q13233 1512 aa29.74■■■□□ 2.35
SVIL-204ENST00000460007 CCNB3Q8WWL7 1395 aa29.74■■■□□ 2.35
SVIL-204ENST00000460007 SCAPERQ9BY12 1400 aa29.73■■■□□ 2.35
SVIL-204ENST00000460007 CDC42BPBQ9Y5S2 1711 aa29.72■■■□□ 2.35
SVIL-204ENST00000460007 APLP2Q06481 763 aa29.72■■■□□ 2.35
SVIL-204ENST00000460007 FRMPD1Q5SYB0 1578 aa29.72■■■□□ 2.35
SVIL-204ENST00000460007 GPATCH8Q9UKJ3 1502 aaKnown RBP29.71■■■□□ 2.35
SVIL-204ENST00000460007 CDC42BPAQ5VT25 1732 aa29.71■■■□□ 2.35
SVIL-204ENST00000460007 LRRC9Q6ZRR7 1453 aa29.7■■■□□ 2.35
SVIL-204ENST00000460007 POGZQ7Z3K3 1410 aa29.67■■■□□ 2.34
SVIL-204ENST00000460007 RICTORQ6R327 1708 aa29.67■■■□□ 2.34
SVIL-204ENST00000460007 SUPT6HQ7KZ85 1726 aaKnown RBP29.66■■■□□ 2.34
SVIL-204ENST00000460007 CFDP1Q9UEE9 299 aaPredicted RBP29.65■■■□□ 2.34
SVIL-204ENST00000460007 NCOA2Q15596 1464 aa29.65■■■□□ 2.34
SVIL-204ENST00000460007 KANK4Q5T7N3 995 aaPredicted RBP29.64■■■□□ 2.34
SVIL-204ENST00000460007 ZNF777Q9ULD5 760 aaPredicted RBP29.64■■■□□ 2.34
SVIL-204ENST00000460007 ABCC1P33527 1531 aa29.61■■■□□ 2.33
SVIL-204ENST00000460007 ZMYM4Q5VZL5 1548 aa29.61■■■□□ 2.33
SVIL-204ENST00000460007 ZNF518AQ6AHZ1 1483 aa29.59■■■□□ 2.33
SVIL-204ENST00000460007 ITSN2Q9NZM3 1697 aa29.58■■■□□ 2.33
SVIL-204ENST00000460007 SAMD9LQ8IVG5 1584 aa29.56■■■□□ 2.32
SVIL-204ENST00000460007 MAGI2Q86UL8 1455 aa29.55■■■□□ 2.32
SVIL-204ENST00000460007 AFAP1Q8N556 730 aa29.55■■■□□ 2.32
SVIL-204ENST00000460007 ARHGEF12Q9NZN5 1544 aa29.55■■■□□ 2.32
SVIL-204ENST00000460007 ARHGEF40Q8TER5 1519 aa29.54■■■□□ 2.32
SVIL-204ENST00000460007 PLEKHH2Q8IVE3 1493 aa29.54■■■□□ 2.32
SVIL-204ENST00000460007 ZFYVE16Q7Z3T8 1539 aa29.52■■■□□ 2.32
SVIL-204ENST00000460007 TRAPPC8Q9Y2L5 1435 aa29.52■■■□□ 2.32
SVIL-204ENST00000460007 KIAA1107Q9UPP5 1409 aa29.51■■■□□ 2.31
SVIL-204ENST00000460007 SYCP2Q9BX26 1530 aa29.5■■■□□ 2.31
SVIL-204ENST00000460007 KDM5CP41229 1560 aa29.5■■■□□ 2.31
SVIL-204ENST00000460007 YEATS2Q9ULM3 1422 aa29.49■■■□□ 2.31
SVIL-204ENST00000460007 HNRNPMP52272 730 aaKnown RBP eCLIP29.48■■■□□ 2.31
SVIL-204ENST00000460007 MYT1LQ9UL68 1186 aa29.48■■■□□ 2.31
SVIL-204ENST00000460007 ZNF644Q9H582 1327 aaPredicted RBP29.47■■■□□ 2.31
SVIL-204ENST00000460007 KDM4FA0A1W2PPD8 638 aa29.46■■■□□ 2.31
SVIL-204ENST00000460007 AEBP2Q6ZN18 517 aaPredicted RBP29.44■■■□□ 2.3
SVIL-204ENST00000460007 HECW2Q9P2P5 1572 aa29.43■■■□□ 2.3
SVIL-204ENST00000460007 MLH3Q9UHC1 1453 aa29.42■■■□□ 2.3
SVIL-204ENST00000460007 MYOM3Q5VTT5 1437 aa29.42■■■□□ 2.3
SVIL-204ENST00000460007 ARID4BQ4LE39 1312 aaPredicted RBP29.42■■■□□ 2.3
SVIL-204ENST00000460007 CAMSAP2Q08AD1 1489 aa29.4■■■□□ 2.3
SVIL-204ENST00000460007 ATP10AO60312 1499 aa29.38■■■□□ 2.29
SVIL-204ENST00000460007 SPAG9O60271 1321 aaKnown RBP29.38■■■□□ 2.29
SVIL-204ENST00000460007 C9orf84Q5VXU9 1444 aa29.37■■■□□ 2.29
SVIL-204ENST00000460007 MIA2Q96PC5 1412 aa29.37■■■□□ 2.29
SVIL-204ENST00000460007 MBD5Q9P267 1494 aa29.36■■■□□ 2.29
SVIL-204ENST00000460007 DIP2CQ9Y2E4 1556 aa29.33■■■□□ 2.29
SVIL-204ENST00000460007 KIDINS220Q9ULH0 1771 aa29.31■■■□□ 2.28
SVIL-204ENST00000460007 ABCA6Q8N139 1617 aa29.31■■■□□ 2.28
SVIL-204ENST00000460007 RSPH4AQ5TD94 716 aa29.3■■■□□ 2.28
SVIL-204ENST00000460007 CCDC141Q6ZP82 1450 aa29.29■■■□□ 2.28
SVIL-204ENST00000460007 ATP7AQ04656 1500 aa29.29■■■□□ 2.28
SVIL-204ENST00000460007 INO80Q9ULG1 1556 aaPredicted RBP29.26■■■□□ 2.28
SVIL-204ENST00000460007 SIGLEC1Q9BZZ2 1709 aa29.26■■■□□ 2.27
SVIL-204ENST00000460007 ARHGEF5Q12774 1597 aa29.26■■■□□ 2.27
SVIL-204ENST00000460007 BCORL1Q5H9F3 1711 aa29.25■■■□□ 2.27
SVIL-204ENST00000460007 FGD6Q6ZV73 1430 aa29.25■■■□□ 2.27
SVIL-204ENST00000460007 REREQ9P2R6 1566 aa29.25■■■□□ 2.27
SVIL-204ENST00000460007 MLECQ14165 292 aa29.22■■■□□ 2.27
SVIL-204ENST00000460007 ADAMTSL3P82987 1691 aa29.21■■■□□ 2.27
SVIL-204ENST00000460007 RTEL1-TNFRSF6BF6WH68 1400 aa29.21■■■□□ 2.27
SVIL-204ENST00000460007 PTPN23Q9H3S7 1636 aa29.21■■■□□ 2.27
SVIL-204ENST00000460007 TSPY4P0CV99 314 aa29.2■■■□□ 2.26
SVIL-204ENST00000460007 TSPY10P0CW01 314 aa29.2■■■□□ 2.26
SVIL-204ENST00000460007 PPARGC1BQ86YN6 1023 aaKnown RBP29.19■■■□□ 2.26
SVIL-204ENST00000460007 TCOF1Q13428 1488 aaKnown RBP29.17■■■□□ 2.26
SVIL-204ENST00000460007 AGLP35573 1532 aa29.16■■■□□ 2.26
SVIL-204ENST00000460007 MADDQ8WXG6 1647 aa29.15■■■□□ 2.26
SVIL-204ENST00000460007 A2MP01023 1474 aa29.15■■■□□ 2.26
SVIL-204ENST00000460007 ADGBQ8N7X0 1667 aa29.11■■■□□ 2.25
SVIL-204ENST00000460007 PTPRMP28827 1452 aa29.1■■■□□ 2.25
SVIL-204ENST00000460007 PLXNC1O60486 1568 aa29.09■■■□□ 2.25
SVIL-204ENST00000460007 MAST1Q9Y2H9 1570 aa29.09■■■□□ 2.25
SVIL-204ENST00000460007 FAM50AQ14320 339 aaKnown RBP29.08■■■□□ 2.25
SVIL-204ENST00000460007 ABCC5O15440 1437 aa29.08■■■□□ 2.25
SVIL-204ENST00000460007 RIMS1Q86UR5 1692 aaKnown RBP29.06■■■□□ 2.24
SVIL-204ENST00000460007 DAPK1P53355 1430 aa29.06■■■□□ 2.24
SVIL-204ENST00000460007 DHX29Q7Z478 1369 aaKnown RBP29.06■■■□□ 2.24
SVIL-204ENST00000460007 FER1L4A9Z1Z3 1794 aa29.05■■■□□ 2.24
SVIL-204ENST00000460007 SHANK2Q9UPX8 1470 aa29.04■■■□□ 2.24
SVIL-204ENST00000460007 DNMT1P26358 1616 aaKnown RBP29.04■■■□□ 2.24
SVIL-204ENST00000460007 ESF1Q9H501 851 aaKnown RBP29.01■■■□□ 2.23
SVIL-204ENST00000460007 CROCC2H7BZ55 1655 aa29.01■■■□□ 2.23
SVIL-204ENST00000460007 GGT6Q6P531 493 aa28.96■■■□□ 2.23
SVIL-204ENST00000460007 PLPPR3Q6T4P5 718 aa28.96■■■□□ 2.23
SVIL-204ENST00000460007 KIF3BO15066 747 aa28.95■■■□□ 2.22
SVIL-204ENST00000460007 CHIC2Q9UKJ5 165 aa28.94■■■□□ 2.22
SVIL-204ENST00000460007 KIF15Q9NS87 1388 aa28.93■■■□□ 2.22
SVIL-204ENST00000460007 CNTLNQ9NXG0 1405 aa28.93■■■□□ 2.22
SVIL-204ENST00000460007 RRP7BPQ9NSQ0 103 aa28.92■■■□□ 2.22
SVIL-204ENST00000460007 ANKRD30AQ9BXX3 1397 aa28.91■■■□□ 2.22
SVIL-204ENST00000460007 DUOX2Q9NRD8 1548 aa28.9■■■□□ 2.22
SVIL-204ENST00000460007 PPP6R1Q9UPN7 881 aa28.89■■■□□ 2.22
SVIL-204ENST00000460007 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.88■■■□□ 2.21
SVIL-204ENST00000460007 CEBPAP49715 358 aaPredicted RBP28.86■■■□□ 2.21
SVIL-204ENST00000460007 NCOA1Q15788 1441 aa28.86■■■□□ 2.21
SVIL-204ENST00000460007 ADGRL2O95490 1459 aa28.85■■■□□ 2.21
SVIL-204ENST00000460007 RRBP1Q9P2E9 1410 aaKnown RBP28.85■■■□□ 2.21
SVIL-204ENST00000460007 EIF2AK4Q9P2K8 1649 aaKnown RBP28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms