RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 ZMYM4Q5VZL5 1548 aa25.1■■□□□ 1.61
LMNA-209ENST00000459904 ARHGAP35Q9NRY4 1499 aa25.09■■□□□ 1.61
LMNA-209ENST00000459904 FER1L4A9Z1Z3 1794 aa25.09■■□□□ 1.61
LMNA-209ENST00000459904 HSPA2P54652 639 aa25.09■■□□□ 1.61
LMNA-209ENST00000459904 SCAPERQ9BY12 1400 aa25.07■■□□□ 1.6
LMNA-209ENST00000459904 PLCH2O75038 1416 aa25.04■■□□□ 1.6
LMNA-209ENST00000459904 CHIC1Q5VXU3 224 aa25.03■■□□□ 1.6
LMNA-209ENST00000459904 POGZQ7Z3K3 1410 aa25.02■■□□□ 1.6
LMNA-209ENST00000459904 FBXO41Q8TF61 875 aa25■■□□□ 1.59
LMNA-209ENST00000459904 CDC42BPBQ9Y5S2 1711 aa24.98■■□□□ 1.59
LMNA-209ENST00000459904 FMN1Q68DA7 1419 aa24.97■■□□□ 1.59
LMNA-209ENST00000459904 MAGI2Q86UL8 1455 aa24.95■■□□□ 1.58
LMNA-209ENST00000459904 EFCAB2Q5VUJ9 269 aa24.94■■□□□ 1.58
LMNA-209ENST00000459904 ARHGAP5Q13017 1502 aa24.94■■□□□ 1.58
LMNA-209ENST00000459904 CEBPAP49715 358 aaPredicted RBP24.93■■□□□ 1.58
LMNA-209ENST00000459904 ATP10AO60312 1499 aa24.92■■□□□ 1.58
LMNA-209ENST00000459904 AFAP1Q8N556 730 aa24.92■■□□□ 1.58
LMNA-209ENST00000459904 TROQ12816 1431 aaPredicted RBP24.91■■□□□ 1.58
LMNA-209ENST00000459904 MYT1LQ9UL68 1186 aa24.89■■□□□ 1.58
LMNA-209ENST00000459904 ARHGEF12Q9NZN5 1544 aa24.89■■□□□ 1.57
LMNA-209ENST00000459904 C9orf84Q5VXU9 1444 aa24.88■■□□□ 1.57
LMNA-209ENST00000459904 CDK11AQ9UQ88 783 aaPredicted RBP24.87■■□□□ 1.57
LMNA-209ENST00000459904 ABCA6Q8N139 1617 aa24.85■■□□□ 1.57
LMNA-209ENST00000459904 PREX1Q8TCU6 1659 aa24.85■■□□□ 1.57
LMNA-209ENST00000459904 DIP2CQ9Y2E4 1556 aa24.84■■□□□ 1.57
LMNA-209ENST00000459904 KDM5CP41229 1560 aa24.84■■□□□ 1.57
LMNA-209ENST00000459904 CDC42BPAQ5VT25 1732 aa24.83■■□□□ 1.57
LMNA-209ENST00000459904 ZNF518AQ6AHZ1 1483 aa24.83■■□□□ 1.56
LMNA-209ENST00000459904 PREX2Q70Z35 1606 aa24.83■■□□□ 1.56
LMNA-209ENST00000459904 ITSN2Q9NZM3 1697 aa24.82■■□□□ 1.56
LMNA-209ENST00000459904 CLIP1P30622 1438 aa24.82■■□□□ 1.56
LMNA-209ENST00000459904 STRCQ7RTU9 1775 aa24.8■■□□□ 1.56
LMNA-209ENST00000459904 TRAPPC8Q9Y2L5 1435 aa24.79■■□□□ 1.56
LMNA-209ENST00000459904 C3P01024 1663 aa24.78■■□□□ 1.56
LMNA-209ENST00000459904 ABCC1P33527 1531 aa24.76■■□□□ 1.55
LMNA-209ENST00000459904 KIDINS220Q9ULH0 1771 aa24.75■■□□□ 1.55
LMNA-209ENST00000459904 SETD1BQ9UPS6 1966 aaKnown RBP24.75■■□□□ 1.55
LMNA-209ENST00000459904 CASKIN1Q8WXD9 1431 aa24.74■■□□□ 1.55
LMNA-209ENST00000459904 CERKQ8TCT0 537 aa24.72■■□□□ 1.55
LMNA-209ENST00000459904 ZNF777Q9ULD5 760 aaPredicted RBP24.7■■□□□ 1.54
LMNA-209ENST00000459904 CCDC18Q5T9S5 1454 aa24.7■■□□□ 1.54
LMNA-209ENST00000459904 MLH3Q9UHC1 1453 aa24.69■■□□□ 1.54
LMNA-209ENST00000459904 SUPT6HQ7KZ85 1726 aaKnown RBP24.68■■□□□ 1.54
LMNA-209ENST00000459904 SAMD9LQ8IVG5 1584 aa24.67■■□□□ 1.54
LMNA-209ENST00000459904 REREQ9P2R6 1566 aa24.67■■□□□ 1.54
LMNA-209ENST00000459904 UHRF1BP1Q6BDS2 1440 aa24.65■■□□□ 1.54
LMNA-209ENST00000459904 SYCP2Q9BX26 1530 aa24.64■■□□□ 1.53
LMNA-209ENST00000459904 FYCO1Q9BQS8 1478 aa24.64■■□□□ 1.53
LMNA-209ENST00000459904 HNRNPMP52272 730 aaKnown RBP eCLIP24.62■■□□□ 1.53
LMNA-209ENST00000459904 AGLP35573 1532 aa24.61■■□□□ 1.53
LMNA-209ENST00000459904 GPATCH8Q9UKJ3 1502 aaKnown RBP24.58■■□□□ 1.53
LMNA-209ENST00000459904 ESF1Q9H501 851 aaKnown RBP24.57■■□□□ 1.52
LMNA-209ENST00000459904 CLTCQ00610 1675 aaKnown RBP24.56■■□□□ 1.52
LMNA-209ENST00000459904 SPAG9O60271 1321 aaKnown RBP24.52■■□□□ 1.52
LMNA-209ENST00000459904 ATP7AQ04656 1500 aa24.51■■□□□ 1.51
LMNA-209ENST00000459904 MROH2AA6NES4 1674 aa24.5■■□□□ 1.51
LMNA-209ENST00000459904 INO80Q9ULG1 1556 aaPredicted RBP24.49■■□□□ 1.51
LMNA-209ENST00000459904 ZNF644Q9H582 1327 aaPredicted RBP24.48■■□□□ 1.51
LMNA-209ENST00000459904 CFDP1Q9UEE9 299 aaPredicted RBP24.48■■□□□ 1.51
LMNA-209ENST00000459904 DMRT2Q9Y5R5 561 aa24.47■■□□□ 1.51
LMNA-209ENST00000459904 CCNB3Q8WWL7 1395 aa24.46■■□□□ 1.51
LMNA-209ENST00000459904 CAMSAP1Q5T5Y3 1602 aa24.46■■□□□ 1.51
LMNA-209ENST00000459904 TIAM1Q13009 1591 aa24.45■■□□□ 1.5
LMNA-209ENST00000459904 ZMYM3Q14202 1370 aa24.44■■□□□ 1.5
LMNA-209ENST00000459904 MTUS2Q5JR59 1369 aa24.44■■□□□ 1.5
LMNA-209ENST00000459904 PTPRTO14522 1441 aa24.44■■□□□ 1.5
LMNA-209ENST00000459904 CNTLNQ9NXG0 1405 aa24.44■■□□□ 1.5
LMNA-209ENST00000459904 PLXNC1O60486 1568 aa24.43■■□□□ 1.5
LMNA-209ENST00000459904 GGT6Q6P531 493 aa24.43■■□□□ 1.5
LMNA-209ENST00000459904 NCOA1Q15788 1441 aa24.43■■□□□ 1.5
LMNA-209ENST00000459904 LTBP4Q8N2S1 1624 aa24.43■■□□□ 1.5
LMNA-209ENST00000459904 NCKAP5LQ9HCH0 1330 aa24.42■■□□□ 1.5
LMNA-209ENST00000459904 A2MP01023 1474 aa24.42■■□□□ 1.5
LMNA-209ENST00000459904 MYO3AQ8NEV4 1616 aa24.4■■□□□ 1.5
LMNA-209ENST00000459904 ADGBQ8N7X0 1667 aa24.4■■□□□ 1.5
LMNA-209ENST00000459904 KIAA1107Q9UPP5 1409 aa24.38■■□□□ 1.49
LMNA-209ENST00000459904 PLEKHH2Q8IVE3 1493 aa24.37■■□□□ 1.49
LMNA-209ENST00000459904 ZNF142P52746 1687 aaPredicted RBP24.35■■□□□ 1.49
LMNA-209ENST00000459904 ILDR2Q71H61 639 aa24.35■■□□□ 1.49
LMNA-209ENST00000459904 NPATQ14207 1427 aa24.35■■□□□ 1.49
LMNA-209ENST00000459904 DISP3Q9P2K9 1392 aa24.33■■□□□ 1.49
LMNA-209ENST00000459904 EHBP1L1Q8N3D4 1523 aa24.33■■□□□ 1.49
LMNA-209ENST00000459904 PTPRKQ15262 1439 aa24.33■■□□□ 1.49
LMNA-209ENST00000459904 MBD5Q9P267 1494 aa24.32■■□□□ 1.48
LMNA-209ENST00000459904 ZNF335Q9H4Z2 1342 aaPredicted RBP24.32■■□□□ 1.48
LMNA-209ENST00000459904 CEP170BQ9Y4F5 1589 aaPredicted RBP24.31■■□□□ 1.48
LMNA-209ENST00000459904 CEP162Q5TB80 1403 aa24.29■■□□□ 1.48
LMNA-209ENST00000459904 FBXO31Q5XUX0 539 aaPredicted RBP24.24■■□□□ 1.47
LMNA-209ENST00000459904 CAMSAP2Q08AD1 1489 aa24.23■■□□□ 1.47
LMNA-209ENST00000459904 NCOA2Q15596 1464 aa24.23■■□□□ 1.47
LMNA-209ENST00000459904 DNMT1P26358 1616 aaKnown RBP24.23■■□□□ 1.47
LMNA-209ENST00000459904 CFAP65Q6ZU64 1925 aaKnown RBP24.22■■□□□ 1.47
LMNA-209ENST00000459904 SPATA31D1Q6ZQQ2 1576 aa24.22■■□□□ 1.47
LMNA-209ENST00000459904 KIF3BO15066 747 aa24.22■■□□□ 1.47
LMNA-209ENST00000459904 TCOF1Q13428 1488 aaKnown RBP24.2■■□□□ 1.47
LMNA-209ENST00000459904 DHX29Q7Z478 1369 aaKnown RBP24.2■■□□□ 1.46
LMNA-209ENST00000459904 POLR1AO95602 1720 aaPredicted RBP24.2■■□□□ 1.46
LMNA-209ENST00000459904 PLA2R1Q13018 1463 aa24.18■■□□□ 1.46
LMNA-209ENST00000459904 CCDC141Q6ZP82 1450 aa24.18■■□□□ 1.46
LMNA-209ENST00000459904 RTEL1-TNFRSF6BF6WH68 1400 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms