RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 ADAMTSL3P82987 1691 aa34.4■■■■□ 3.1
SSNA1-202ENST00000459860 PTPRMP28827 1452 aa34.39■■■■□ 3.1
SSNA1-202ENST00000459860 TIAM1Q13009 1591 aa34.39■■■■□ 3.1
SSNA1-202ENST00000459860 DENND4BO75064 1496 aaPredicted RBP34.39■■■■□ 3.1
SSNA1-202ENST00000459860 PREX2Q70Z35 1606 aa34.34■■■■□ 3.09
SSNA1-202ENST00000459860 ARHGAP5Q13017 1502 aa34.34■■■■□ 3.09
SSNA1-202ENST00000459860 CDC42BPAQ5VT25 1732 aa34.31■■■■□ 3.08
SSNA1-202ENST00000459860 CDC42BPBQ9Y5S2 1711 aa34.31■■■■□ 3.08
SSNA1-202ENST00000459860 ARID4BQ4LE39 1312 aaPredicted RBP34.3■■■■□ 3.08
SSNA1-202ENST00000459860 ARHGEF40Q8TER5 1519 aa34.29■■■■□ 3.08
SSNA1-202ENST00000459860 EFCAB2Q5VUJ9 269 aa34.28■■■■□ 3.08
SSNA1-202ENST00000459860 MAP3K1Q13233 1512 aa34.28■■■■□ 3.08
SSNA1-202ENST00000459860 BCORL1Q5H9F3 1711 aa34.27■■■■□ 3.08
SSNA1-202ENST00000459860 SUPT6HQ7KZ85 1726 aaKnown RBP34.27■■■■□ 3.08
SSNA1-202ENST00000459860 RICTORQ6R327 1708 aa34.26■■■■□ 3.07
SSNA1-202ENST00000459860 APLP2Q06481 763 aa34.24■■■■□ 3.07
SSNA1-202ENST00000459860 ZMYM4Q5VZL5 1548 aa34.22■■■■□ 3.07
SSNA1-202ENST00000459860 MADDQ8WXG6 1647 aa34.22■■■■□ 3.07
SSNA1-202ENST00000459860 ITSN2Q9NZM3 1697 aa34.22■■■■□ 3.07
SSNA1-202ENST00000459860 CCNB3Q8WWL7 1395 aa34.21■■■■□ 3.07
SSNA1-202ENST00000459860 YEATS2Q9ULM3 1422 aa34.21■■■■□ 3.07
SSNA1-202ENST00000459860 LRRC9Q6ZRR7 1453 aa34.2■■■■□ 3.06
SSNA1-202ENST00000459860 SCAPERQ9BY12 1400 aa34.17■■■■□ 3.06
SSNA1-202ENST00000459860 GPATCH8Q9UKJ3 1502 aaKnown RBP34.17■■■■□ 3.06
SSNA1-202ENST00000459860 MAGI2Q86UL8 1455 aa34.16■■■■□ 3.06
SSNA1-202ENST00000459860 ZFYVE16Q7Z3T8 1539 aa34.14■■■■□ 3.06
SSNA1-202ENST00000459860 POGZQ7Z3K3 1410 aa34.13■■■■□ 3.05
SSNA1-202ENST00000459860 NCOA2Q15596 1464 aa34.13■■■■□ 3.05
SSNA1-202ENST00000459860 ABCC1P33527 1531 aa34.1■■■■□ 3.05
SSNA1-202ENST00000459860 LMTK3Q96Q04 1460 aa34.08■■■■□ 3.05
SSNA1-202ENST00000459860 SIGLEC1Q9BZZ2 1709 aa34.07■■■■□ 3.05
SSNA1-202ENST00000459860 CFDP1Q9UEE9 299 aaPredicted RBP34.07■■■■□ 3.04
SSNA1-202ENST00000459860 SAMD9LQ8IVG5 1584 aa34.06■■■■□ 3.04
SSNA1-202ENST00000459860 ZNF777Q9ULD5 760 aaPredicted RBP34.06■■■■□ 3.04
SSNA1-202ENST00000459860 ZNF518AQ6AHZ1 1483 aa34.06■■■■□ 3.04
SSNA1-202ENST00000459860 KANK4Q5T7N3 995 aaPredicted RBP34.03■■■■□ 3.04
SSNA1-202ENST00000459860 PLEKHH2Q8IVE3 1493 aa34.02■■■■□ 3.04
SSNA1-202ENST00000459860 RIMS1Q86UR5 1692 aaKnown RBP34.02■■■■□ 3.04
SSNA1-202ENST00000459860 MLECQ14165 292 aa33.98■■■■□ 3.03
SSNA1-202ENST00000459860 ATP10AO60312 1499 aa33.98■■■■□ 3.03
SSNA1-202ENST00000459860 SYCP2Q9BX26 1530 aa33.98■■■■□ 3.03
SSNA1-202ENST00000459860 KDM5CP41229 1560 aa33.98■■■■□ 3.03
SSNA1-202ENST00000459860 ARHGEF12Q9NZN5 1544 aa33.94■■■■□ 3.02
SSNA1-202ENST00000459860 AFAP1Q8N556 730 aa33.93■■■■□ 3.02
SSNA1-202ENST00000459860 C9orf84Q5VXU9 1444 aa33.93■■■■□ 3.02
SSNA1-202ENST00000459860 PLPPR3Q6T4P5 718 aa33.92■■■■□ 3.02
SSNA1-202ENST00000459860 KIAA1107Q9UPP5 1409 aa33.92■■■■□ 3.02
SSNA1-202ENST00000459860 TRAPPC8Q9Y2L5 1435 aa33.91■■■■□ 3.02
SSNA1-202ENST00000459860 HSPA2P54652 639 aa33.91■■■■□ 3.02
SSNA1-202ENST00000459860 FBXO41Q8TF61 875 aa33.91■■■■□ 3.02
SSNA1-202ENST00000459860 MYT1LQ9UL68 1186 aa33.89■■■■□ 3.02
SSNA1-202ENST00000459860 CAMSAP2Q08AD1 1489 aa33.87■■■■□ 3.01
SSNA1-202ENST00000459860 MYOM3Q5VTT5 1437 aa33.87■■■■□ 3.01
SSNA1-202ENST00000459860 MLH3Q9UHC1 1453 aa33.84■■■■□ 3.01
SSNA1-202ENST00000459860 HNRNPMP52272 730 aaKnown RBP eCLIP33.84■■■■□ 3.01
SSNA1-202ENST00000459860 ZNF644Q9H582 1327 aaPredicted RBP33.81■■■■□ 3
SSNA1-202ENST00000459860 MIA2Q96PC5 1412 aa33.81■■■■□ 3
SSNA1-202ENST00000459860 KIDINS220Q9ULH0 1771 aa33.78■■■■□ 3
SSNA1-202ENST00000459860 DIP2CQ9Y2E4 1556 aa33.78■■■■□ 3
SSNA1-202ENST00000459860 ABCA6Q8N139 1617 aa33.78■■■■□ 3
SSNA1-202ENST00000459860 FER1L4A9Z1Z3 1794 aa33.76■■■■□ 3
SSNA1-202ENST00000459860 CEBPAP49715 358 aaPredicted RBP33.76■■■□□ 2.99
SSNA1-202ENST00000459860 SPAG9O60271 1321 aaKnown RBP33.76■■■□□ 2.99
SSNA1-202ENST00000459860 MBD5Q9P267 1494 aa33.75■■■□□ 2.99
SSNA1-202ENST00000459860 ATP7AQ04656 1500 aa33.74■■■□□ 2.99
SSNA1-202ENST00000459860 INO80Q9ULG1 1556 aaPredicted RBP33.74■■■□□ 2.99
SSNA1-202ENST00000459860 CCDC141Q6ZP82 1450 aa33.74■■■□□ 2.99
SSNA1-202ENST00000459860 ARHGEF5Q12774 1597 aa33.72■■■□□ 2.99
SSNA1-202ENST00000459860 REREQ9P2R6 1566 aa33.71■■■□□ 2.99
SSNA1-202ENST00000459860 PTPN23Q9H3S7 1636 aa33.71■■■□□ 2.99
SSNA1-202ENST00000459860 RSPH4AQ5TD94 716 aa33.7■■■□□ 2.99
SSNA1-202ENST00000459860 FGD6Q6ZV73 1430 aa33.67■■■□□ 2.98
SSNA1-202ENST00000459860 AGLP35573 1532 aa33.63■■■□□ 2.97
SSNA1-202ENST00000459860 ADGBQ8N7X0 1667 aa33.62■■■□□ 2.97
SSNA1-202ENST00000459860 RTEL1-TNFRSF6BF6WH68 1400 aa33.62■■■□□ 2.97
SSNA1-202ENST00000459860 TCOF1Q13428 1488 aaKnown RBP33.59■■■□□ 2.97
SSNA1-202ENST00000459860 TSPY4P0CV99 314 aa33.58■■■□□ 2.97
SSNA1-202ENST00000459860 TSPY10P0CW01 314 aa33.58■■■□□ 2.97
SSNA1-202ENST00000459860 CROCC2H7BZ55 1655 aa33.55■■■□□ 2.96
SSNA1-202ENST00000459860 MAST1Q9Y2H9 1570 aa33.55■■■□□ 2.96
SSNA1-202ENST00000459860 PREX1Q8TCU6 1659 aa33.55■■■□□ 2.96
SSNA1-202ENST00000459860 CERKQ8TCT0 537 aa33.54■■■□□ 2.96
SSNA1-202ENST00000459860 A2MP01023 1474 aa33.53■■■□□ 2.96
SSNA1-202ENST00000459860 UHRF1BP1Q6BDS2 1440 aa33.53■■■□□ 2.96
SSNA1-202ENST00000459860 PPARGC1BQ86YN6 1023 aaKnown RBP33.52■■■□□ 2.96
SSNA1-202ENST00000459860 DNMT1P26358 1616 aaKnown RBP33.52■■■□□ 2.96
SSNA1-202ENST00000459860 PLXNC1O60486 1568 aa33.51■■■□□ 2.96
SSNA1-202ENST00000459860 SHANK2Q9UPX8 1470 aa33.47■■■□□ 2.95
SSNA1-202ENST00000459860 DAPK1P53355 1430 aa33.45■■■□□ 2.94
SSNA1-202ENST00000459860 FAM50AQ14320 339 aaKnown RBP33.44■■■□□ 2.94
SSNA1-202ENST00000459860 ESF1Q9H501 851 aaKnown RBP33.44■■■□□ 2.94
SSNA1-202ENST00000459860 ABCC5O15440 1437 aa33.43■■■□□ 2.94
SSNA1-202ENST00000459860 CNTLNQ9NXG0 1405 aa33.43■■■□□ 2.94
SSNA1-202ENST00000459860 DMRT2Q9Y5R5 561 aa33.42■■■□□ 2.94
SSNA1-202ENST00000459860 C3P01024 1663 aa33.42■■■□□ 2.94
SSNA1-202ENST00000459860 DHX29Q7Z478 1369 aaKnown RBP33.39■■■□□ 2.94
SSNA1-202ENST00000459860 STRCQ7RTU9 1775 aa33.39■■■□□ 2.94
SSNA1-202ENST00000459860 SETD1BQ9UPS6 1966 aaKnown RBP33.35■■■□□ 2.93
SSNA1-202ENST00000459860 ZMYM3Q14202 1370 aa33.33■■■□□ 2.93
SSNA1-202ENST00000459860 PTPRTO14522 1441 aa33.32■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 420.4 ms